Experiment set16IT038 for Pseudomonas fluorescens FW300-N2E2

Compare to:

Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate C

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_5239 -4.5 -14.5 Putative sulfate permease conserved
Pf6N2E2_735 -4.0 -14.1 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) conserved
Pf6N2E2_1296 -3.7 -7.1 DNA-binding response regulator, LuxR family compare
Pf6N2E2_732 -3.4 -8.2 Respiratory nitrate reductase gamma chain (EC 1.7.99.4) compare
Pf6N2E2_729 -3.3 -16.8 Respiratory nitrate reductase alpha chain (EC 1.7.99.4) conserved
Pf6N2E2_725 -3.2 -6.7 Nitrate/nitrite response regulator protein compare
Pf6N2E2_731 -2.5 -6.2 Respiratory nitrate reductase delta chain (EC 1.7.99.4) compare
Pf6N2E2_730 -2.4 -10.2 Respiratory nitrate reductase beta chain (EC 1.7.99.4) compare
Pf6N2E2_5080 -2.0 -7.8 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family compare
Pf6N2E2_4813 -2.0 -12.8 Probable two-component sensor, near polyamine transporter compare
Pf6N2E2_1072 -1.8 -5.8 LmbE-like protein compare
Pf6N2E2_2389 -1.8 -8.3 Phosphoenolpyruvate synthase (EC 2.7.9.2) compare
Pf6N2E2_1295 -1.8 -5.3 Sensor histidine kinase compare
Pf6N2E2_722 -1.7 -5.6 FIG139928: Putative protease compare
Pf6N2E2_721 -1.6 -6.1 FIG139552: Putative protease compare
Pf6N2E2_1411 -1.4 -5.6 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) compare
Pf6N2E2_938 -1.1 -5.2 hypothetical protein compare
Pf6N2E2_3576 +1.0 6.7 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) compare
Pf6N2E2_3579 +1.0 8.8 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) compare
Pf6N2E2_3577 +1.1 7.4 ABC transporter for L-leucine/L-isoleucine/D-alanine, ATPase component 1 LivG (from data) compare
Pf6N2E2_3578 +1.1 9.0 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) compare
Pf6N2E2_3580 +1.2 9.2 Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) compare
Pf6N2E2_2802 +1.2 8.7 Alcohol dehydrogenase (EC 1.1.1.1) conserved
Pf6N2E2_1678 +1.3 9.4 Major facilitator family transporter compare


Specific phenotypes for denitrifying Sodium pyruvate across organisms