Experiment set16IT037 for Pseudomonas fluorescens FW300-N2E2

Compare to:

Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate C

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_726 -5.2 -6.2 Nitrate/nitrite sensor protein (EC 2.7.3.-) compare
Pf6N2E2_5239 -5.2 -13.0 Putative sulfate permease conserved
Pf6N2E2_732 -4.7 -7.1 Respiratory nitrate reductase gamma chain (EC 1.7.99.4) compare
Pf6N2E2_729 -4.6 -16.2 Respiratory nitrate reductase alpha chain (EC 1.7.99.4) conserved
Pf6N2E2_735 -4.0 -15.5 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) conserved
Pf6N2E2_731 -3.9 -5.4 Respiratory nitrate reductase delta chain (EC 1.7.99.4) compare
Pf6N2E2_730 -3.7 -11.4 Respiratory nitrate reductase beta chain (EC 1.7.99.4) compare
Pf6N2E2_722 -3.6 -7.1 FIG139928: Putative protease compare
Pf6N2E2_5309 -3.4 -8.8 Permease of the drug/metabolite transporter (DMT) superfamily compare
Pf6N2E2_1296 -3.4 -7.1 DNA-binding response regulator, LuxR family compare
Pf6N2E2_721 -3.3 -8.1 FIG139552: Putative protease compare
Pf6N2E2_5308 -2.7 -12.5 Transcriptional regulator, AraC family compare
Pf6N2E2_706 -2.6 -7.1 Nitric oxide reductase activation protein NorQ compare
Pf6N2E2_709 -2.6 -7.9 Nitric-oxide reductase subunit C (EC 1.7.99.7) compare
Pf6N2E2_711 -2.4 -8.5 Nitric oxide reductase activation protein NorD conserved
Pf6N2E2_5080 -2.4 -10.0 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family compare
Pf6N2E2_1411 -2.3 -7.7 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) compare
Pf6N2E2_4813 -2.2 -13.9 Probable two-component sensor, near polyamine transporter compare
Pf6N2E2_710 -2.2 -10.1 Nitric-oxide reductase subunit B (EC 1.7.99.7) conserved
Pf6N2E2_717 -2.0 -7.5 Functional role page for Anaerobic nitric oxide reductase transcription regulator NorR compare
Pf6N2E2_5295 -1.9 -6.2 Serine hydroxymethyltransferase (EC 2.1.2.1) compare
Pf6N2E2_1295 -1.7 -5.1 Sensor histidine kinase compare
Pf6N2E2_5884 -1.6 -9.1 Sensor histidine kinase compare
Pf6N2E2_2389 -1.6 -8.1 Phosphoenolpyruvate synthase (EC 2.7.9.2) compare
Pf6N2E2_2994 -1.3 -5.2 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS compare
Pf6N2E2_5298 -1.1 -5.1 Sarcosine oxidase beta subunit (EC 1.5.3.1) compare


Specific phenotypes for denitrifying Sodium pyruvate across organisms