Experiment set16IT036 for Pseudomonas fluorescens FW300-N2E2

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Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate B

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_725 -5.6 -5.5 Nitrate/nitrite response regulator protein compare
Pf6N2E2_5239 -5.4 -9.7 Putative sulfate permease conserved
Pf6N2E2_723 -4.8 -5.3 FIG138517: Putative lipid carrier protein compare
Pf6N2E2_726 -4.6 -6.2 Nitrate/nitrite sensor protein (EC 2.7.3.-) compare
Pf6N2E2_729 -4.5 -15.0 Respiratory nitrate reductase alpha chain (EC 1.7.99.4) conserved
Pf6N2E2_732 -4.5 -6.1 Respiratory nitrate reductase gamma chain (EC 1.7.99.4) compare
Pf6N2E2_722 -4.5 -6.8 FIG139928: Putative protease compare
Pf6N2E2_730 -4.4 -8.5 Respiratory nitrate reductase beta chain (EC 1.7.99.4) compare
Pf6N2E2_718 -4.3 -5.0 Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) compare
Pf6N2E2_731 -4.0 -6.2 Respiratory nitrate reductase delta chain (EC 1.7.99.4) compare
Pf6N2E2_5309 -4.0 -8.0 Permease of the drug/metabolite transporter (DMT) superfamily compare
Pf6N2E2_735 -3.9 -14.9 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) conserved
Pf6N2E2_711 -3.9 -8.9 Nitric oxide reductase activation protein NorD conserved
Pf6N2E2_1296 -3.9 -6.9 DNA-binding response regulator, LuxR family compare
Pf6N2E2_721 -3.4 -9.0 FIG139552: Putative protease compare
Pf6N2E2_5080 -2.9 -11.1 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family compare
Pf6N2E2_4813 -2.7 -13.7 Probable two-component sensor, near polyamine transporter compare
Pf6N2E2_1411 -2.6 -7.5 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) compare
Pf6N2E2_2389 -2.4 -9.4 Phosphoenolpyruvate synthase (EC 2.7.9.2) compare
Pf6N2E2_5308 -2.3 -11.4 Transcriptional regulator, AraC family compare
Pf6N2E2_5295 -2.0 -5.3 Serine hydroxymethyltransferase (EC 2.1.2.1) compare
Pf6N2E2_706 -2.0 -5.5 Nitric oxide reductase activation protein NorQ compare
Pf6N2E2_5884 -1.8 -8.9 Sensor histidine kinase compare
Pf6N2E2_717 -1.8 -7.0 Functional role page for Anaerobic nitric oxide reductase transcription regulator NorR compare
Pf6N2E2_709 -1.5 -6.4 Nitric-oxide reductase subunit C (EC 1.7.99.7) compare
Pf6N2E2_4097 -1.5 -10.3 FIG00953365: hypothetical protein compare
Pf6N2E2_5471 -1.3 -5.7 Transcriptional activator MetR compare
Pf6N2E2_710 -1.2 -5.8 Nitric-oxide reductase subunit B (EC 1.7.99.7) conserved


Specific phenotypes for denitrifying Sodium pyruvate across organisms