Experiment set16IT035 for Pseudomonas fluorescens FW300-N2E2

Compare to:

Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_5239 -5.6 -8.6 Putative sulfate permease conserved
Pf6N2E2_718 -5.2 -5.0 Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) compare
Pf6N2E2_726 -5.0 -6.0 Nitrate/nitrite sensor protein (EC 2.7.3.-) compare
Pf6N2E2_732 -4.9 -5.8 Respiratory nitrate reductase gamma chain (EC 1.7.99.4) compare
Pf6N2E2_729 -4.6 -15.6 Respiratory nitrate reductase alpha chain (EC 1.7.99.4) conserved
Pf6N2E2_722 -4.6 -7.6 FIG139928: Putative protease compare
Pf6N2E2_721 -4.2 -9.3 FIG139552: Putative protease compare
Pf6N2E2_735 -4.1 -14.9 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) conserved
Pf6N2E2_730 -4.0 -10.3 Respiratory nitrate reductase beta chain (EC 1.7.99.4) compare
Pf6N2E2_725 -3.6 -6.8 Nitrate/nitrite response regulator protein compare
Pf6N2E2_1296 -3.5 -5.7 DNA-binding response regulator, LuxR family compare
Pf6N2E2_5309 -3.5 -8.4 Permease of the drug/metabolite transporter (DMT) superfamily compare
Pf6N2E2_711 -3.1 -8.9 Nitric oxide reductase activation protein NorD conserved
Pf6N2E2_706 -2.9 -7.5 Nitric oxide reductase activation protein NorQ compare
Pf6N2E2_5308 -2.8 -13.7 Transcriptional regulator, AraC family compare
Pf6N2E2_4813 -2.8 -15.0 Probable two-component sensor, near polyamine transporter compare
Pf6N2E2_1411 -2.5 -6.6 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) compare
Pf6N2E2_2389 -2.4 -9.5 Phosphoenolpyruvate synthase (EC 2.7.9.2) compare
Pf6N2E2_5080 -2.3 -10.7 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family compare
Pf6N2E2_727 -1.9 -6.1 Nitrate/nitrite transporter compare
Pf6N2E2_709 -1.7 -7.3 Nitric-oxide reductase subunit C (EC 1.7.99.7) compare
Pf6N2E2_1072 -1.6 -5.2 LmbE-like protein compare
Pf6N2E2_4097 -1.5 -10.9 FIG00953365: hypothetical protein compare
Pf6N2E2_2994 -1.3 -5.8 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS compare
Pf6N2E2_717 -1.2 -6.0 Functional role page for Anaerobic nitric oxide reductase transcription regulator NorR compare
Pf6N2E2_710 -1.2 -6.8 Nitric-oxide reductase subunit B (EC 1.7.99.7) conserved


Specific phenotypes for denitrifying Sodium pyruvate across organisms