Experiment set16IT032 for Pseudomonas fluorescens FW300-N2E2

Compare to:

Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_5239 -5.0 -12.5 Putative sulfate permease conserved
Pf6N2E2_5309 -4.6 -7.3 Permease of the drug/metabolite transporter (DMT) superfamily compare
Pf6N2E2_729 -4.6 -14.3 Respiratory nitrate reductase alpha chain (EC 1.7.99.4) conserved
Pf6N2E2_718 -4.1 -5.4 Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) compare
Pf6N2E2_735 -3.9 -14.5 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) conserved
Pf6N2E2_730 -3.8 -9.5 Respiratory nitrate reductase beta chain (EC 1.7.99.4) compare
Pf6N2E2_732 -3.7 -7.4 Respiratory nitrate reductase gamma chain (EC 1.7.99.4) compare
Pf6N2E2_711 -3.7 -8.5 Nitric oxide reductase activation protein NorD conserved
Pf6N2E2_725 -3.6 -6.3 Nitrate/nitrite response regulator protein compare
Pf6N2E2_721 -3.5 -9.0 FIG139552: Putative protease compare
Pf6N2E2_731 -3.5 -5.3 Respiratory nitrate reductase delta chain (EC 1.7.99.4) compare
Pf6N2E2_706 -3.2 -6.9 Nitric oxide reductase activation protein NorQ compare
Pf6N2E2_1296 -3.2 -7.0 DNA-binding response regulator, LuxR family compare
Pf6N2E2_5308 -3.0 -13.4 Transcriptional regulator, AraC family compare
Pf6N2E2_722 -3.0 -7.8 FIG139928: Putative protease compare
Pf6N2E2_2389 -2.9 -9.8 Phosphoenolpyruvate synthase (EC 2.7.9.2) compare
Pf6N2E2_4813 -2.5 -13.7 Probable two-component sensor, near polyamine transporter compare
Pf6N2E2_5080 -2.3 -9.5 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family compare
Pf6N2E2_1411 -2.2 -7.6 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) compare
Pf6N2E2_709 -2.1 -7.9 Nitric-oxide reductase subunit C (EC 1.7.99.7) compare
Pf6N2E2_710 -1.8 -8.3 Nitric-oxide reductase subunit B (EC 1.7.99.7) conserved
Pf6N2E2_717 -1.6 -6.9 Functional role page for Anaerobic nitric oxide reductase transcription regulator NorR compare
Pf6N2E2_5884 -1.5 -7.7 Sensor histidine kinase compare
Pf6N2E2_5471 -1.4 -5.9 Transcriptional activator MetR compare


Specific phenotypes for denitrifying Sodium pyruvate across organisms