Experiment set16IT024 for Bifidobacterium breve UCC2003

Compare to:

chicken 5; day 7; diet=StandardDiet; sample=FecalPellet

Genes with specific phenotypes:

  gene name fitness t score description  
BBR_RS15525 -4.4 -7.4 RNase adapter RapZ compare
BBR_RS14170 -4.4 -8.4 hemolysin III compare
BBR_RS10560 -4.0 -12.7 hypothetical protein compare
BBR_RS14155 -3.5 -10.0 L-serine ammonia-lyase compare
BBR_RS14470 -3.0 -5.3 hypothetical protein compare
BBR_RS15470 -2.8 -6.5 LysR family transcriptional regulator compare
BBR_RS12385 -2.6 -11.8 oxidoreductase compare
BBR_RS13015 -2.5 -5.8 peptide deformylase compare
BBR_RS12990 -2.2 -7.3 4-hydroxy-tetrahydrodipicolinate reductase compare
BBR_RS15510 -2.2 -11.0 excinuclease ABC subunit UvrA compare
BBR_RS21120 -2.2 -6.1 hypothetical protein compare
BBR_RS13355 -2.0 -6.3 ABC transporter substrate-binding protein compare
BBR_RS20365 -2.0 -7.0 glutaredoxin family protein compare
BBR_RS18155 -1.9 -6.3 acyl-CoA thioesterase II compare
BBR_RS19650 -1.8 -11.5 NUDIX hydrolase compare
BBR_RS11520 -1.8 -6.8 P-II family nitrogen regulator compare
BBR_RS20355 -1.7 -13.3 class 1b ribonucleoside-diphosphate reductase subunit alpha compare
BBR_RS20350 -1.7 -11.8 class 1b ribonucleoside-diphosphate reductase subunit beta compare
BBR_RS10790 -1.7 -6.9 LacI family transcriptional regulator compare
BBR_RS15515 -1.6 -7.6 excinuclease ABC subunit UvrC compare
BBR_RS18010 -1.6 -8.6 zinc metalloprotease compare
BBR_RS20360 -1.6 -8.4 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI compare
BBR_RS14030 -1.6 -6.7 DNA repair protein RecN compare
BBR_RS15255 -1.6 -9.4 glutamate synthase large subunit compare
BBR_RS19295 -1.6 -10.3 ATP-dependent DNA helicase RecG compare
BBR_RS12120 -1.5 -7.6 aspartate ammonia-lyase compare
BBR_RS18770 -1.5 -7.0 hypothetical protein compare
BBR_RS17165 -1.4 -5.4 tRNA dihydrouridine synthase DusB compare
BBR_RS19935 -1.3 -9.5 ABC transporter ATP-binding protein compare
BBR_RS17355 -1.3 -6.5 phosphatase PAP2 family protein compare
BBR_RS20470 -1.2 -6.0 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG compare
BBR_RS19940 -1.2 -8.6 ABC transporter ATP-binding protein compare
BBR_RS18145 -1.1 -7.4 MFS transporter compare
BBR_RS19690 -1.1 -6.4 glycerophosphodiester phosphodiesterase compare
BBR_RS20215 -1.0 -7.8 sodium:proton antiporter compare
BBR_RS12495 +1.0 6.4 sugar ABC transporter substrate-binding protein compare
BBR_RS16350 +1.1 5.3 carbohydrate ABC transporter permease compare
BBR_RS16365 +1.2 7.8 alpha-mannosidase compare
BBR_RS19440 +1.3 8.5 polysaccharide deacetylase family protein compare
BBR_RS16360 +1.3 6.6 sugar ABC transporter substrate-binding protein compare
BBR_RS19610 +1.7 11.7 diguanylate cyclase compare
BBR_RS19930 +2.0 12.3 FAD:protein FMN transferase compare
BBR_RS11440 +2.3 11.3 FMN-binding protein compare
BBR_RS11160 +3.2 23.5 FadR family transcriptional regulator compare


Specific phenotypes for chicken diet=StandardDiet; sample=FecalPellet across organisms