Experiment set15S706 for Methanococcus maripaludis S2

Compare to:

Formate no stress control

200 most important genes:

  gene name fitness t score description  
MMP_RS00300 -6.0 -1.9 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS07005 -5.3 -1.6 4Fe-4S binding protein compare
MMP_RS03315 -5.2 -2.7 ferrous iron transport protein A compare
MMP_RS01955 -5.0 -4.5 hypothetical protein compare
MMP_RS06700 -4.9 -14.1 hypothetical protein compare
MMP_RS01915 -4.4 -15.9 DUF354 domain-containing protein compare
MMP_RS01985 -4.3 -10.9 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS01175 -4.1 -5.6 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS04585 -4.1 -12.7 AIR synthase related protein compare
MMP_RS00305 -3.9 -4.2 phosphoribosyl-ATP diphosphatase compare
MMP_RS01910 -3.9 -11.5 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS01920 -3.9 -15.2 glycosyltransferase family 2 protein compare
MMP_RS01925 -3.8 -11.1 DUF1616 domain-containing protein compare
MMP_RS04780 -3.7 -4.5 ribonuclease P compare
MMP_RS01800 -3.7 -8.5 TIGR00303 family protein compare
MMP_RS00685 -3.6 -5.6 2-phospho-L-lactate guanylyltransferase compare
MMP_RS06400 -3.6 -2.1 4Fe-4S binding protein compare
MMP_RS03025 -3.6 -7.4 molybdenum cofactor guanylyltransferase compare
MMP_RS03475 -3.5 -1.5 hypothetical protein compare
MMP_RS06685 -3.5 -19.6 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS05920 -3.4 -1.5 50S ribosomal protein L37e compare
MMP_RS06355 -3.4 -6.3 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS08635 -3.3 -3.9 UbiA family prenyltransferase compare
MMP_RS03435 -3.3 -3.8 ketol-acid reductoisomerase compare
MMP_RS06680 -3.3 -16.8 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS07380 -3.3 -4.7 transcription elongation factor Spt5 compare
MMP_RS07635 -3.2 -11.2 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS00110 -3.2 -5.5 hypothetical protein compare
MMP_RS06895 -3.2 -3.1 selenocysteine-specific translation elongation factor compare
MMP_RS06350 -3.2 -8.0 HesA/MoeB/ThiF family protein compare
MMP_RS07605 -3.1 -7.1 diadenylate cyclase compare
MMP_RS05515 -3.1 -13.8 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS03015 -3.0 -18.3 GTP 3' 8-cyclase MoaA compare
MMP_RS02345 -3.0 -4.1 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS01905 -3.0 -12.8 glycosyltransferase compare
MMP_RS08790 -2.9 -3.8 translation initiation factor IF-2 subunit alpha compare
MMP_RS06285 -2.9 -5.7 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS05250 -2.9 -3.6 NFYB/HAP3 family transcription factor subunit compare
MMP_RS01970 -2.9 -9.9 TIGR04279 domain-containing protein compare
MMP_RS05345 -2.9 -8.8 hypothetical protein compare
MMP_RS02280 -2.9 -2.2 DUF211 domain-containing protein compare
MMP_RS04775 -2.9 -6.5 adenosylhomocysteinase compare
MMP_RS07755 -2.8 -2.9 DUF555 domain-containing protein compare
MMP_RS02195 -2.8 -4.7 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS01500 -2.8 -5.3 CBS domain-containing protein compare
MMP_RS06720 -2.8 -11.7 response regulator transcription factor compare
MMP_RS01755 -2.8 -3.0 DUF2097 domain-containing protein compare
MMP_RS07730 -2.7 -4.5 pyruvate synthase subunit beta compare
MMP_RS01960 -2.7 -1.2 hypothetical protein compare
MMP_RS02010 -2.7 -18.8 PHP domain-containing protein compare
MMP_RS05845 -2.7 -2.0 tRNA-intron lyase compare
MMP_RS06925 -2.7 -3.5 ribonuclease VapC4 compare
MMP_RS01900 -2.7 -12.8 hypothetical protein compare
MMP_RS06345 -2.6 -16.3 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS02165 -2.6 -11.6 tRNA-dihydrouridine synthase compare
MMP_RS01220 -2.6 -11.9 hypothetical protein compare
MMP_RS03600 -2.6 -3.6 triose-phosphate isomerase compare
MMP_RS03400 -2.6 -6.3 archease compare
MMP_RS06295 -2.6 -8.0 methanogenesis marker 14 protein compare
MMP_RS01880 -2.5 -7.0 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS08820 -2.5 -7.8 hypothetical protein compare
MMP_RS01875 -2.5 -8.8 N-acetyltransferase compare
MMP_RS07555 -2.5 -1.5 monovalent cation/H+ antiporter subunit E compare
MMP_RS06715 -2.5 -17.6 cache domain-containing protein compare
MMP_RS02355 -2.5 -5.7 30S ribosomal protein S27ae compare
MMP_RS08300 -2.5 -2.9 metal-sulfur cluster assembly factor compare
MMP_RS06270 -2.5 -8.4 TIGR00300 family protein compare
MMP_RS06230 -2.5 -3.4 helix-turn-helix domain-containing protein compare
MMP_RS05930 -2.5 -2.8 3-isopropylmalate dehydratase large subunit compare
MMP_RS08745 -2.5 -8.4 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS03640 -2.4 -5.3 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS01225 -2.4 -11.5 DUF5379 domain-containing protein compare
MMP_RS08715 -2.4 -3.2 formylmethanofuran dehydrogenase subunit B compare
MMP_RS08720 -2.4 -2.8 4Fe-4S binding protein compare
MMP_RS06475 -2.4 -4.8 FAD-dependent oxidoreductase compare
MMP_RS01610 -2.4 -7.2 hypothetical protein compare
MMP_RS02800 -2.4 -5.9 nucleotidyltransferase domain-containing protein compare
MMP_RS06535 -2.3 -9.1 2-oxoacid:acceptor oxidoreductase family protein compare
MMP_RS00895 -2.3 -5.6 hypothetical protein compare
MMP_RS08210 -2.3 -5.2 phosphatidylglycerophosphatase A compare
MMP_RS02135 -2.3 -4.7 DUF5612 domain-containing protein compare
MMP_RS04890 -2.3 -1.8 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS03155 -2.3 -11.2 precorrin-6A reductase compare
MMP_RS01830 -2.3 -2.8 tRNA-Val compare
MMP_RS07435 -2.3 -3.6 GMP synthase subunit A compare
MMP_RS07545 -2.2 -2.1 HTH domain-containing protein compare
MMP_RS00750 -2.2 -5.0 fumarate hydratase compare
MMP_RS07750 -2.2 -8.3 DUF357 domain-containing protein compare
MMP_RS06200 -2.2 -13.9 M24 family metallopeptidase compare
MMP_RS01725 -2.2 -8.2 class I SAM-dependent methyltransferase family protein compare
MMP_RS06340 -2.2 -12.1 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS03035 -2.2 -5.4 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS07075 -2.2 -4.6 phosphomannomutase/phosphoglucomutase compare
MMP_RS02240 -2.1 -7.2 methanogenesis marker 7 protein compare
MMP_RS05875 -2.1 -7.3 hydroxyethylthiazole kinase compare
MMP_RS07445 -2.1 -5.8 helix-turn-helix domain-containing protein compare
MMP_RS01700 -2.1 -2.1 dihydroxy-acid dehydratase compare
MMP_RS01265 -2.1 -2.7 hypothetical protein compare
MMP_RS07600 -2.0 -4.8 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS08440 -2.0 -3.6 cell division protein SepF compare
MMP_RS02145 -2.0 -6.6 winged helix-turn-helix transcriptional regulator compare
MMP_RS07580 -2.0 -5.7 DUF356 domain-containing protein compare
MMP_RS01795 -2.0 -3.2 methanogenesis marker 6 protein compare
MMP_RS04720 -2.0 -2.8 DedA family protein compare
MMP_RS01665 -2.0 -5.4 DUF2111 domain-containing protein compare
MMP_RS06310 -2.0 -2.8 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS08445 -2.0 -9.8 DUF2099 family protein compare
MMP_RS05545 -2.0 -10.3 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS05550 -1.9 -1.6 cation:proton antiporter compare
MMP_RS06730 -1.9 -3.7 phosphopantothenate/pantothenate synthetase compare
MMP_RS06020 -1.9 -7.0 archaeoflavoprotein AfpA compare
MMP_RS06625 -1.9 -2.4 DNA primase compare
MMP_RS03700 -1.9 -8.3 sodium:proton antiporter compare
MMP_RS06120 -1.9 -4.8 UPF0147 family protein compare
MMP_RS04685 -1.9 -4.0 DUF126 domain-containing protein compare
MMP_RS01020 -1.9 -2.3 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS07685 -1.8 -13.6 TIGR01212 family radical SAM protein compare
MMP_RS04955 -1.8 -6.1 DNA topoisomerase I compare
MMP_RS07735 -1.8 -1.8 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS06130 -1.8 -4.1 peptidylprolyl isomerase compare
MMP_RS07575 -1.8 -4.6 RNA ligase partner protein compare
MMP_RS06630 -1.8 -1.4 UPF0058 family protein compare
MMP_RS03140 -1.8 -13.3 hypothetical protein compare
MMP_RS06540 -1.7 -4.7 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS00295 -1.7 -4.7 gamma carbonic anhydrase family protein compare
MMP_RS06885 -1.7 -3.8 50S ribosome-binding GTPase compare
MMP_RS00320 -1.7 -3.7 class I SAM-dependent methyltransferase compare
MMP_RS06545 -1.7 -7.3 ferredoxin family protein compare
MMP_RS03145 -1.7 -9.1 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS06705 -1.7 -7.6 formate/nitrite transporter family protein compare
MMP_RS00060 -1.7 -2.0 3-dehydroquinate synthase II compare
MMP_RS05555 -1.7 -2.7 DUF4040 domain-containing protein compare
MMP_RS00810 -1.7 -8.5 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS06105 -1.7 -9.7 hydrogenase maturation peptidase HycI compare
MMP_RS03305 -1.6 -10.7 winged helix-turn-helix domain-containing protein compare
MMP_RS07200 -1.6 -5.8 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS06840 -1.6 -1.8 DNA-directed RNA polymerase subunit N compare
MMP_RS02245 -1.6 -3.3 hypothetical protein compare
MMP_RS05765 -1.6 -9.4 M42 family metallopeptidase compare
MMP_RS06670 -1.5 -4.1 glucose-6-phosphate isomerase compare
MMP_RS01545 -1.5 -2.2 CBS domain-containing protein compare
MMP_RS01005 -1.5 -2.8 riboflavin synthase compare
MMP_RS01895 -1.5 -8.7 flippase compare
MMP_RS00985 -1.5 -6.1 CDC48 family AAA ATPase compare
MMP_RS01325 -1.5 -3.7 dihydroneopterin aldolase family protein compare
MMP_RS08645 -1.5 -10.2 UPF0179 family protein compare
MMP_RS05265 -1.5 -3.0 2-isopropylmalate synthase compare
MMP_RS08435 -1.5 -4.1 Era-like GTP-binding protein compare
MMP_RS07955 -1.5 -5.9 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS05540 -1.5 -3.3 hypothetical protein compare
MMP_RS04870 -1.5 -6.7 TIGR02253 family HAD-type hydrolase compare
MMP_RS05640 -1.5 -4.5 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS00115 -1.5 -11.0 radical SAM protein compare
MMP_RS03580 -1.5 -4.8 signal recognition particle-docking protein FtsY compare
MMP_RS01885 -1.5 -4.0 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS02190 -1.4 -2.8 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS08650 -1.4 -4.3 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS08100 -1.4 -7.5 8-amino-7-oxononanoate synthase compare
MMP_RS05925 -1.4 -3.7 small nuclear ribonucleoprotein compare
MMP_RS08370 -1.4 -1.2 cation:proton antiporter subunit C compare
MMP_RS04500 -1.4 -11.0 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS05425 -1.4 -6.6 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS07525 -1.4 -7.4 4Fe-4S binding protein compare
MMP_RS09020 -1.4 -1.6 hypothetical protein compare
MMP_RS02230 -1.4 -10.3 sodium-dependent transporter compare
MMP_RS00695 -1.4 -1.2 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS07190 -1.3 -8.0 chromosome segregation protein SMC compare
MMP_RS01365 -1.3 -2.4 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS03250 -1.3 -3.7 MJ1244 family protein compare
MMP_RS07090 -1.3 -7.6 tRNA (adenine-N1)-methyltransferase compare
MMP_RS03110 -1.3 -4.3 glycosyltransferase family 2 protein compare
MMP_RS02340 -1.3 -2.4 DNA-directed RNA polymerase subunit E'' compare
MMP_RS08460 -1.3 -3.3 proteasome-activating nucleotidase compare
MMP_RS08105 -1.3 -8.0 6-carboxyhexanoate--CoA ligase compare
MMP_RS03555 -1.2 -7.4 transcriptional regulator compare
MMP_RS01385 -1.2 -1.1 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS03960 -1.2 -1.5 hypothetical protein compare
MMP_RS08095 -1.2 -5.7 dethiobiotin synthase compare
MMP_RS05815 -1.2 -1.1 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS06215 -1.2 -4.0 30S ribosomal protein S6e compare
MMP_RS02900 -1.2 -0.9 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS08330 -1.2 -4.5 NADH-quinone oxidoreductase subunit H compare
MMP_RS07425 -1.2 -5.5 GTP-binding protein compare
MMP_RS01975 -1.2 -7.4 hypothetical protein compare
MMP_RS00050 -1.1 -7.6 AarF/UbiB family protein compare
MMP_RS04710 -1.1 -1.2 hypothetical protein compare
MMP_RS08320 -1.1 -6.1 molybdopterin molybdotransferase MoeA compare
MMP_RS02875 -1.1 -6.9 chorismate pyruvate-lyase family protein compare
MMP_RS06725 -1.1 -7.0 hypothetical protein compare
MMP_RS01250 -1.1 -6.4 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS06865 -1.1 -1.8 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS02170 -1.1 -5.8 CBS domain-containing protein compare
MMP_RS07645 -1.1 -6.7 aldehyde dehydrogenase family protein compare
MMP_RS05445 -1.1 -6.8 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS03445 -1.1 -1.6 methanogenesis marker 17 protein compare
MMP_RS00515 -1.0 -1.4 DUF655 domain-containing protein compare
MMP_RS07540 -1.0 -2.4 CBS domain-containing protein compare
MMP_RS05440 -1.0 -7.3 winged helix-turn-helix transcriptional regulator compare
MMP_RS00335 -1.0 -6.0 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMP_RS07390 -1.0 -1.8 cell division protein FtsZ compare


Specific Phenotypes

For 2 genes in this experiment