Experiment set15S384 for Ralstonia solanacearum IBSBF1503

Compare to:

SMSA with Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride

200 most important genes:

  gene name fitness t score description  
RALBFv3_RS06885 -5.4 -6.4 ABC transporter compare
RALBFv3_RS15530 -5.1 -7.1 hypothetical protein compare
RALBFv3_RS10690 -5.1 -6.8 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
RALBFv3_RS13815 -5.1 -5.0 ADP-glyceromanno-heptose 6-epimerase compare
RALBFv3_RS03320 -4.8 -4.7 DNA-directed RNA polymerase subunit omega compare
RALBFv3_RS09450 -4.5 -26.8 MexE family multidrug efflux RND transporter periplasmic adaptor subunit compare
RALBFv3_RS06890 -4.2 -5.0 outer membrane lipid asymmetry maintenance protein MlaD compare
RALBFv3_RS09440 -4.2 -27.2 multidrug transporter compare
RALBFv3_RS18145 -4.1 -19.1 phospholipid carrier-dependent glycosyltransferase compare
RALBFv3_RS09445 -4.1 -28.2 multidrug efflux RND transporter permease subunit compare
RALBFv3_RS03470 -4.0 -2.0 hypothetical protein compare
RALBFv3_RS12670 -4.0 -8.2 glycosyltransferase family 2 protein compare
RALBFv3_RS00340 -3.9 -2.6 cell division protein FtsZ compare
RALBFv3_RS12685 -3.8 -20.4 glycosyl transferase compare
RALBFv3_RS12680 -3.7 -7.4 glycosyltransferase family 2 protein compare
RALBFv3_RS07425 -3.6 -6.3 N-acylglucosamine 2-epimerase compare
RALBFv3_RS09770 -3.6 -6.3 membrane protein compare
RALBFv3_RS22185 -3.4 -17.9 glucan biosynthesis protein D compare
RALBFv3_RS03600 -3.4 -13.7 glycosyl transferase compare
RALBFv3_RS13810 -3.3 -3.7 D-glycero-beta-D-manno-heptose-7-phosphate kinase compare
RALBFv3_RS12700 -3.3 -3.8 lipopolysaccharide heptosyltransferase I compare
RALBFv3_RS03610 -3.3 -9.5 glycosyl transferase compare
RALBFv3_RS04235 -3.2 -12.4 heme biosynthesis protein HemY compare
RALBFv3_RS12655 -3.2 -4.7 glucose-1-phosphate thymidylyltransferase compare
RALBFv3_RS13750 -3.1 -2.1 DUF2059 domain-containing protein compare
RALBFv3_RS03605 -3.0 -4.4 glycosyltransferase family 2 protein compare
RALBFv3_RS11780 -3.0 -1.8 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase compare
RALBFv3_RS06785 -2.9 -2.8 twin-arginine translocase subunit TatC compare
RALBFv3_RS12145 -2.8 -2.7 lipopolysaccharide heptosyltransferase II compare
RALBFv3_RS04240 -2.8 -8.8 fused uroporphyrinogen-III synthase HemD/membrane protein HemX compare
RALBFv3_RS06900 -2.8 -1.7 ABC transporter ATP-binding protein compare
RALBFv3_RS09645 -2.8 -6.3 RNA polymerase-binding protein DksA compare
RALBFv3_RS06875 -2.7 -5.0 STAS domain-containing protein compare
RALBFv3_RS10055 -2.6 -5.4 lauroyl acyltransferase compare
RALBFv3_RS03720 -2.6 -13.0 aromatic ring-hydroxylating dioxygenase subunit alpha compare
RALBFv3_RS16290 -2.4 -2.3 hypothetical protein compare
RALBFv3_RS03615 -2.4 -3.6 ligase compare
RALBFv3_RS01300 -2.4 -3.2 glucose-6-phosphate isomerase compare
RALBFv3_RS02165 -2.3 -5.5 ATP-dependent zinc metalloprotease FtsH compare
RALBFv3_RS14445 -2.2 -4.4 RNA polymerase sigma factor RpoE compare
RALBFv3_RS06880 -2.2 -1.2 hypothetical protein compare
RALBFv3_RS11130 -2.2 -11.0 GTPase compare
RALBFv3_RS05210 -2.1 -1.4 membrane protein compare
RALBFv3_RS15495 -2.1 -1.2 hypothetical protein compare
RALBFv3_RS12675 -2.1 -12.5 EpsG family protein compare
RALBFv3_RS10585 -2.0 -15.5 sensor histidine kinase compare
RALBFv3_RS13930 -2.0 -16.7 cobalamin biosynthesis protein CobD compare
RALBFv3_RS10220 -1.9 -8.0 NAD-dependent epimerase compare
RALBFv3_RS12925 -1.9 -2.8 translocation protein TolB compare
RALBFv3_RS10600 -1.9 -11.2 DNA-binding response regulator compare
RALBFv3_RS24170 -1.9 -1.1 hypothetical protein compare
RALBFv3_RS11145 -1.9 -2.8 RNase adapter RapZ compare
RALBFv3_RS10685 -1.8 -2.0 hypothetical protein compare
RALBFv3_RS10895 -1.7 -4.7 S41 family peptidase compare
RALBFv3_RS21785 -1.7 -1.0 hypothetical protein compare
RALBFv3_RS10230 -1.7 -5.0 FAD-binding oxidoreductase compare
RALBFv3_RS07005 -1.7 -4.6 membrane protein compare
RALBFv3_RS06610 -1.7 -4.5 hypothetical protein compare
RALBFv3_RS00410 -1.6 -5.5 RIP metalloprotease RseP compare
RALBFv3_RS15490 -1.6 -7.4 ATP-dependent RNA helicase HrpA compare
RALBFv3_RS12150 -1.6 -3.4 zinc-finger domain-containing protein compare
RALBFv3_RS10875 -1.6 -3.6 phosphoenolpyruvate--protein phosphotransferase compare
RALBFv3_RS14455 -1.6 -3.0 sugar dehydratase compare
RALBFv3_RS03055 -1.6 -3.5 RNA polymerase sigma factor compare
RALBFv3_RS10225 -1.5 -2.9 short-chain dehydrogenase compare
RALBFv3_RS04660 -1.5 -2.1 CDP-6-deoxy-delta-3,4-glucoseen reductase compare
RALBFv3_RS22785 -1.5 -3.3 hypothetical protein compare
RALBFv3_RS10360 -1.4 -9.2 hypothetical protein compare
RALBFv3_RS06100 -1.4 -2.1 ABC transporter permease compare
RALBFv3_RS03340 -1.4 -3.3 serine/threonine-protein phosphatase compare
RALBFv3_RS10565 -1.4 -3.1 SPOR domain-containing protein compare
RALBFv3_RS03715 -1.4 -4.7 exodeoxyribonuclease VII small subunit compare
RALBFv3_RS12910 -1.4 -1.3 protein TolQ compare
RALBFv3_RS15230 -1.4 -0.8 hypothetical protein compare
RALBFv3_RS17480 -1.4 -5.7 flagellar synthesis regulator flen protein compare
RALBFv3_RS23105 -1.4 -1.6 chemotaxis protein CheY compare
RALBFv3_RS14400 -1.3 -1.7 septum formation protein Maf compare
RALBFv3_RS21140 -1.3 -2.1 DNA-binding response regulator compare
RALBFv3_RS12050 -1.3 -11.7 polymerase compare
RALBFv3_RS06245 -1.3 -1.7 peroxiredoxin compare
RALBFv3_RS05605 -1.3 -2.8 hydrogen peroxide-inducible genes activator compare
RALBFv3_RS07930 -1.3 -5.1 hypothetical protein compare
RALBFv3_RS06485 -1.3 -1.2 anthranilate synthase component I compare
RALBFv3_RS00770 -1.2 -1.2 muconolactone delta-isomerase compare
RALBFv3_RS13010 -1.2 -4.4 DUF883 domain-containing protein compare
RALBFv3_RS10215 -1.2 -6.7 hypothetical protein compare
RALBFv3_RS15270 -1.2 -1.6 DUF4115 domain-containing protein compare
RALBFv3_RS11645 -1.2 -1.0 D-tyrosyl-tRNA(Tyr) deacylase compare
RALBFv3_RS15860 -1.2 -0.7 UDP phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase compare
RALBFv3_RS05675 -1.2 -6.0 DNA helicase RecG compare
RALBFv3_RS11120 -1.1 -5.3 hypothetical protein compare
RALBFv3_RS05970 -1.1 -7.1 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
RALBFv3_RS05190 -1.1 -0.8 DUF3579 domain-containing protein compare
RALBFv3_RS12715 -1.1 -4.1 channel protein TolC compare
RALBFv3_RS11775 -1.1 -5.7 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
RALBFv3_RS13775 -1.1 -1.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
RALBFv3_RS19960 -1.1 -1.2 hypothetical protein compare
RALBFv3_RS10835 -1.1 -3.6 hypothetical protein compare
RALBFv3_RS23640 -1.1 -0.7 hypothetical protein compare
RALBFv3_RS03005 -1.1 -0.9 polyribonucleotide nucleotidyltransferase compare
RALBFv3_RS21135 -1.1 -4.4 two-component sensor histidine kinase compare
RALBFv3_RS12010 -1.1 -4.0 recombinase RecA compare
RALBFv3_RS22780 -1.0 -4.7 metallophosphoesterase compare
RALBFv3_RS17840 -1.0 -6.5 cytochrome ubiquinol oxidase subunit I compare
RALBFv3_RS02185 -1.0 -1.7 transcription elongation factor GreA compare
RALBFv3_RS20925 -1.0 -1.4 endoribonuclease L-PSP compare
RALBFv3_RS06085 -1.0 -5.4 sigma-54-dependent Fis family transcriptional regulator compare
RALBFv3_RS02775 -1.0 -1.0 PaaI family thioesterase compare
RALBFv3_RS14460 -1.0 -3.1 peptidase compare
RALBFv3_RS00200 -1.0 -2.5 lysophospholipid transporter LplT compare
RALBFv3_RS12690 -1.0 -3.9 chain-length determining protein compare
RALBFv3_RS03760 -1.0 -0.5 membrane protein compare
RALBFv3_RS06745 -1.0 -3.7 2-alkenal reductase compare
RALBFv3_RS12045 -1.0 -8.5 pilin compare
RALBFv3_RS05460 -1.0 -1.4 3-deoxy-7-phosphoheptulonate synthase compare
RALBFv3_RS11170 -0.9 -5.4 RNA polymerase sigma-54 factor compare
RALBFv3_RS10650 -0.9 -1.9 IclR family transcriptional regulator compare
RALBFv3_RS11465 -0.9 -5.5 sodium:solute symporter compare
RALBFv3_RS00235 -0.9 -3.2 isoaspartyl peptidase/L-asparaginase compare
RALBFv3_RS05110 -0.9 -3.1 N-acetylmuramoyl-L-alanine amidase compare
RALBFv3_RS05690 -0.9 -1.1 preprotein translocase subunit YajC compare
RALBFv3_RS22130 -0.9 -7.2 phosphatidylserine decarboxylase compare
RALBFv3_RS04200 -0.9 -1.8 hypothetical protein compare
RALBFv3_RS15485 -0.9 -1.1 amino-acid N-acetyltransferase compare
RALBFv3_RS14025 -0.9 -3.4 hypothetical protein compare
RALBFv3_RS15235 -0.9 -2.2 RNA polymerase sigma factor RpoS compare
RALBFv3_RS22620 -0.9 -2.8 hypothetical protein compare
RALBFv3_RS12935 -0.9 -4.0 tol-pal system protein YbgF compare
RALBFv3_RS20370 -0.9 -4.3 transcriptional regulator compare
RALBFv3_RS15165 -0.9 -1.2 antibiotic biosynthesis monooxygenase compare
RALBFv3_RS10210 -0.8 -2.0 GtrA family protein compare
RALBFv3_RS23275 -0.8 -2.7 hypothetical protein compare
RALBFv3_RS19810 -0.8 -1.3 TetR/AcrR family transcriptional regulator compare
RALBFv3_RS23490 -0.8 -4.4 NAD(P)-dependent oxidoreductase compare
RALBFv3_RS07735 -0.8 -3.3 type II secretion system protein N compare
RALBFv3_RS14910 -0.8 -2.0 peptidylprolyl isomerase compare
RALBFv3_RS18640 -0.8 -1.8 IS5/IS1182 family transposase compare
RALBFv3_RS09015 -0.8 -4.1 SET domain-containing protein-lysine N-methyltransferase compare
RALBFv3_RS05965 -0.8 -4.0 esterase compare
RALBFv3_RS06015 -0.8 -1.4 carbohydrate kinase family protein compare
RALBFv3_RS01390 -0.8 -1.6 efflux RND transporter periplasmic adaptor subunit compare
RALBFv3_RS13150 -0.8 -3.6 hypothetical protein compare
RALBFv3_RS19390 -0.8 -3.0 XRE family transcriptional regulator compare
RALBFv3_RS22775 -0.8 -5.7 hypothetical protein compare
RALBFv3_RS01445 -0.8 -4.9 transcription-repair coupling factor compare
RALBFv3_RS04605 -0.8 -3.9 sulfite exporter TauE/SafE family protein compare
RALBFv3_RS05445 -0.8 -4.6 TIGR02099 family protein compare
RALBFv3_RS24770 -0.8 -2.5 hypothetical protein compare
RALBFv3_RS12930 -0.8 -0.8 peptidoglycan-associated lipoprotein compare
RALBFv3_RS10980 -0.8 -1.2 hypothetical protein compare
RALBFv3_RS09005 -0.8 -1.3 DNA-binding response regulator compare
RALBFv3_RS15505 -0.8 -1.5 sterol desaturase family protein compare
RALBFv3_RS15390 -0.8 -0.5 oxidoreductase compare
RALBFv3_RS08980 -0.8 -2.6 lysoplasmalogenase compare
RALBFv3_RS13005 -0.8 -6.0 membrane protein compare
RALBFv3_RS06090 -0.8 -2.3 PAS domain-containing sensor histidine kinase compare
RALBFv3_RS06720 -0.8 -3.6 cytochrome c compare
RALBFv3_RS04070 -0.8 -1.1 type II secretion system protein compare
RALBFv3_RS07050 -0.8 -1.0 divalent-cation tolerance protein CutA compare
RALBFv3_RS06230 -0.8 -0.6 M23 family peptidase compare
RALBFv3_RS11060 -0.8 -4.7 insulinase family protein compare
RALBFv3_RS17835 -0.7 -2.6 cytochrome bd ubiquinol oxidase subunit II compare
RALBFv3_RS09740 -0.7 -4.1 LysR family transcriptional regulator compare
RALBFv3_RS03435 -0.7 -3.4 allophanate hydrolase compare
RALBFv3_RS06690 -0.7 -1.9 sensor histidine kinase compare
RALBFv3_RS08635 -0.7 -2.1 ATP-dependent DNA helicase Rep compare
RALBFv3_RS08885 -0.7 -3.6 hypothetical protein compare
RALBFv3_RS03750 -0.7 -3.8 DNA polymerase I compare
RALBFv3_RS24305 -0.7 -1.2 hypothetical protein compare
RALBFv3_RS15310 -0.7 -3.2 FtsH protease activity modulator HflK compare
RALBFv3_RS00935 -0.7 -1.6 GALA protein compare
RALBFv3_RS06020 -0.7 -1.0 membrane protein compare
RALBFv3_RS05945 -0.7 -3.7 shikimate dehydrogenase compare
RALBFv3_RS24475 -0.7 -1.6 hypothetical protein compare
RALBFv3_RS24515 -0.7 -0.8 hypothetical protein compare
RALBFv3_RS08565 -0.7 -0.7 type II toxin-antitoxin system RelE/ParE family toxin compare
RALBFv3_RS05960 -0.7 -2.2 chorismate lyase compare
RALBFv3_RS10635 -0.7 -2.0 DUF3108 domain-containing protein compare
RALBFv3_RS09400 -0.7 -2.6 membrane protein insertion efficiency factor YidD compare
RALBFv3_RS18350 -0.7 -1.2 arsenate reductase ArsC compare
RALBFv3_RS09590 -0.7 -0.6 hypothetical protein compare
RALBFv3_RS02670 -0.7 -1.7 methylisocitrate lyase compare
RALBFv3_RS00290 -0.7 -2.7 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
RALBFv3_RS03110 -0.7 -0.2 DUF924 domain-containing protein compare
RALBFv3_RS18390 -0.7 -4.7 LysR family transcriptional regulator compare
RALBFv3_RS17845 -0.7 -3.2 GbsR/MarR family transcriptional regulator compare
RALBFv3_RS05390 -0.7 -1.2 histidine ammonia-lyase compare
RALBFv3_RS10920 -0.7 -0.7 glycerol-3-phosphate dehydrogenase compare
RALBFv3_RS02765 -0.7 -1.7 LysR family transcriptional regulator compare
RALBFv3_RS02720 -0.7 -0.9 peroxide stress protein YaaA compare
RALBFv3_RS11805 -0.7 -2.2 HlyC/CorC family transporter compare
RALBFv3_RS23245 -0.6 -1.7 DNA-binding protein compare
RALBFv3_RS14375 -0.6 -3.6 RluA family pseudouridine synthase compare
RALBFv3_RS24610 -0.6 -1.1 AAA family ATPase compare
RALBFv3_RS11315 -0.6 -2.3 membrane protein compare
RALBFv3_RS10795 -0.6 -1.6 sigma-54-dependent Fis family transcriptional regulator compare
RALBFv3_RS21475 -0.6 -1.2 transcriptional regulator compare
RALBFv3_RS14250 -0.6 -1.6 sugar ABC transporter ATP-binding protein compare
RALBFv3_RS02610 -0.6 -0.9 3-isopropylmalate dehydrogenase compare
RALBFv3_RS01385 -0.6 -1.6 AcrB/AcrD/AcrF family protein compare


Specific Phenotypes

For 2 genes in this experiment

For stress Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride in Ralstonia solanacearum IBSBF1503

For stress Ralstonia_antibiotic_mix_minus_Triphenyltetrazoliumchloride across organisms