Experiment set15S352 for Ralstonia solanacearum IBSBF1503

Compare to:

SMSA with Ralstonia_antibiotic_mix_minus_Chloramphenicol

200 most important genes:

  gene name fitness t score description  
RALBFv3_RS10690 -7.8 -7.0 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
RALBFv3_RS18145 -7.2 -17.5 phospholipid carrier-dependent glycosyltransferase compare
RALBFv3_RS06890 -6.2 -4.3 outer membrane lipid asymmetry maintenance protein MlaD compare
RALBFv3_RS03320 -5.9 -3.6 DNA-directed RNA polymerase subunit omega compare
RALBFv3_RS07425 -5.6 -3.8 N-acylglucosamine 2-epimerase compare
RALBFv3_RS12700 -5.2 -3.6 lipopolysaccharide heptosyltransferase I compare
RALBFv3_RS09450 -5.1 -22.8 MexE family multidrug efflux RND transporter periplasmic adaptor subunit compare
RALBFv3_RS03605 -5.1 -4.9 glycosyltransferase family 2 protein compare
RALBFv3_RS13815 -5.0 -3.5 ADP-glyceromanno-heptose 6-epimerase compare
RALBFv3_RS09445 -5.0 -28.5 multidrug efflux RND transporter permease subunit compare
RALBFv3_RS09440 -4.8 -26.3 multidrug transporter compare
RALBFv3_RS06885 -4.6 -5.5 ABC transporter compare
RALBFv3_RS10055 -4.3 -4.7 lauroyl acyltransferase compare
RALBFv3_RS13810 -4.2 -3.3 D-glycero-beta-D-manno-heptose-7-phosphate kinase compare
RALBFv3_RS12670 -4.1 -9.5 glycosyltransferase family 2 protein compare
RALBFv3_RS12680 -3.7 -7.8 glycosyltransferase family 2 protein compare
RALBFv3_RS09770 -3.0 -6.4 membrane protein compare
RALBFv3_RS14400 -3.0 -2.8 septum formation protein Maf compare
RALBFv3_RS05210 -2.9 -2.0 membrane protein compare
RALBFv3_RS12655 -2.8 -3.3 glucose-1-phosphate thymidylyltransferase compare
RALBFv3_RS06875 -2.8 -4.1 STAS domain-containing protein compare
RALBFv3_RS02165 -2.8 -6.4 ATP-dependent zinc metalloprotease FtsH compare
RALBFv3_RS03610 -2.7 -8.5 glycosyl transferase compare
RALBFv3_RS12685 -2.7 -16.4 glycosyl transferase compare
RALBFv3_RS07360 -2.6 -15.3 glycerol-3-phosphate dehydrogenase compare
RALBFv3_RS03600 -2.6 -12.6 glycosyl transferase compare
RALBFv3_RS03470 -2.5 -3.6 hypothetical protein compare
RALBFv3_RS09615 -2.5 -5.2 DNA-binding response regulator compare
RALBFv3_RS12010 -2.5 -4.1 recombinase RecA compare
RALBFv3_RS09610 -2.5 -9.1 sensor histidine kinase compare
RALBFv3_RS06900 -2.4 -1.3 ABC transporter ATP-binding protein compare
RALBFv3_RS11145 -2.4 -3.2 RNase adapter RapZ compare
RALBFv3_RS12145 -2.3 -2.7 lipopolysaccharide heptosyltransferase II compare
RALBFv3_RS01300 -2.3 -3.2 glucose-6-phosphate isomerase compare
RALBFv3_RS00200 -2.2 -4.0 lysophospholipid transporter LplT compare
RALBFv3_RS11780 -2.2 -0.9 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase compare
RALBFv3_RS01390 -2.2 -2.5 efflux RND transporter periplasmic adaptor subunit compare
RALBFv3_RS10225 -2.2 -5.2 short-chain dehydrogenase compare
RALBFv3_RS03615 -2.1 -3.9 ligase compare
RALBFv3_RS06785 -2.1 -2.4 twin-arginine translocase subunit TatC compare
RALBFv3_RS13775 -2.1 -1.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
RALBFv3_RS04235 -2.1 -7.6 heme biosynthesis protein HemY compare
RALBFv3_RS16385 -2.0 -9.6 phosphogluconate dehydratase compare
RALBFv3_RS17840 -2.0 -10.3 cytochrome ubiquinol oxidase subunit I compare
RALBFv3_RS04070 -1.9 -1.8 type II secretion system protein compare
RALBFv3_RS05060 -1.9 -6.6 exodeoxyribonuclease VII large subunit compare
RALBFv3_RS12925 -1.9 -2.5 translocation protein TolB compare
RALBFv3_RS09645 -1.9 -3.2 RNA polymerase-binding protein DksA compare
RALBFv3_RS14455 -1.9 -2.7 sugar dehydratase compare
RALBFv3_RS17835 -1.8 -5.4 cytochrome bd ubiquinol oxidase subunit II compare
RALBFv3_RS10685 -1.8 -1.7 hypothetical protein compare
RALBFv3_RS19100 -1.8 -7.0 multidrug MFS transporter compare
RALBFv3_RS00770 -1.7 -1.7 muconolactone delta-isomerase compare
RALBFv3_RS04545 -1.7 -1.4 DNA polymerase III subunit chi compare
RALBFv3_RS15485 -1.7 -2.3 amino-acid N-acetyltransferase compare
RALBFv3_RS04190 -1.6 -6.8 NAD+ synthase compare
RALBFv3_RS13750 -1.6 -2.0 DUF2059 domain-containing protein compare
RALBFv3_RS06880 -1.6 -1.1 hypothetical protein compare
RALBFv3_RS23640 -1.5 -1.6 hypothetical protein compare
RALBFv3_RS12930 -1.5 -1.0 peptidoglycan-associated lipoprotein compare
RALBFv3_RS21230 -1.5 -0.8 hypothetical protein compare
RALBFv3_RS00215 -1.5 -1.2 disulfide bond formation protein B compare
RALBFv3_RS05675 -1.5 -6.3 DNA helicase RecG compare
RALBFv3_RS03555 -1.5 -4.9 nicotinate-nucleotide adenylyltransferase compare
RALBFv3_RS10230 -1.4 -3.6 FAD-binding oxidoreductase compare
RALBFv3_RS10565 -1.4 -2.5 SPOR domain-containing protein compare
RALBFv3_RS11475 -1.4 -1.6 DUF502 domain-containing protein compare
RALBFv3_RS06940 -1.4 -0.9 shikimate kinase compare
RALBFv3_RS20245 -1.4 -7.2 fumarylacetoacetase compare
RALBFv3_RS19080 -1.4 -1.7 low molecular weight phosphotyrosine protein phosphatase compare
RALBFv3_RS04240 -1.4 -6.4 fused uroporphyrinogen-III synthase HemD/membrane protein HemX compare
RALBFv3_RS15310 -1.3 -5.0 FtsH protease activity modulator HflK compare
RALBFv3_RS22785 -1.3 -3.0 hypothetical protein compare
RALBFv3_RS00210 -1.3 -2.2 DNA repair protein RadA compare
RALBFv3_RS05190 -1.3 -0.7 DUF3579 domain-containing protein compare
RALBFv3_RS15230 -1.3 -0.7 hypothetical protein compare
RALBFv3_RS05235 -1.3 -2.7 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
RALBFv3_RS01505 -1.3 -8.7 class I poly(R)-hydroxyalkanoic acid synthase compare
RALBFv3_RS03715 -1.3 -1.9 exodeoxyribonuclease VII small subunit compare
RALBFv3_RS12475 -1.2 -8.2 MFS transporter compare
RALBFv3_RS09680 -1.2 -1.1 DUF484 domain-containing protein compare
RALBFv3_RS10220 -1.2 -5.4 NAD-dependent epimerase compare
RALBFv3_RS22185 -1.2 -8.1 glucan biosynthesis protein D compare
RALBFv3_RS03060 -1.1 -1.4 DUF3619 domain-containing protein compare
RALBFv3_RS05690 -1.1 -1.8 preprotein translocase subunit YajC compare
RALBFv3_RS07395 -1.1 -5.0 glycerol kinase compare
RALBFv3_RS08345 -1.1 -2.1 hypothetical protein compare
RALBFv3_RS20055 -1.1 -0.9 type VI secretion system contractile sheath small subunit compare
RALBFv3_RS05680 -1.1 -2.0 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA compare
RALBFv3_RS19960 -1.1 -0.9 hypothetical protein compare
RALBFv3_RS21785 -1.1 -0.7 hypothetical protein compare
RALBFv3_RS18435 -1.1 -2.8 UDP-glucose 4-epimerase GalE compare
RALBFv3_RS00235 -1.1 -3.4 isoaspartyl peptidase/L-asparaginase compare
RALBFv3_RS05595 -1.1 -1.0 DNA starvation/stationary phase protection protein compare
RALBFv3_RS01455 -1.1 -0.8 phosphoserine phosphatase SerB compare
RALBFv3_RS17845 -1.1 -3.6 GbsR/MarR family transcriptional regulator compare
RALBFv3_RS01410 -1.0 -0.7 hypothetical protein compare
RALBFv3_RS14895 -1.0 -0.7 outer membrane protein assembly factor BamC compare
RALBFv3_RS12940 -1.0 -2.0 7-cyano-7-deazaguanine synthase QueC compare
RALBFv3_RS10895 -1.0 -3.3 S41 family peptidase compare
RALBFv3_RS14005 -1.0 -1.3 hypothetical protein compare
RALBFv3_RS16290 -1.0 -1.2 hypothetical protein compare
RALBFv3_RS01325 -1.0 -0.9 tRNA-Asp compare
RALBFv3_RS12910 -1.0 -1.1 protein TolQ compare
RALBFv3_RS19885 -1.0 -1.7 DUF962 domain-containing protein compare
RALBFv3_RS12715 -1.0 -3.4 channel protein TolC compare
RALBFv3_RS00695 -0.9 -1.5 MoxR family ATPase compare
RALBFv3_RS06320 -0.9 -2.0 division/cell wall cluster transcriptional repressor MraZ compare
RALBFv3_RS05685 -0.9 -1.0 tRNA guanosine(34) transglycosylase Tgt compare
RALBFv3_RS08635 -0.9 -1.9 ATP-dependent DNA helicase Rep compare
RALBFv3_RS01675 -0.9 -3.3 PAS domain-containing sensor histidine kinase compare
RALBFv3_RS06190 -0.9 -1.5 prepilin peptidase compare
RALBFv3_RS02460 -0.9 -1.5 fumarate hydratase compare
RALBFv3_RS11420 -0.9 -5.2 FAD-linked oxidase compare
RALBFv3_RS03005 -0.9 -0.5 polyribonucleotide nucleotidyltransferase compare
RALBFv3_RS10990 -0.9 -1.5 protoheme IX farnesyltransferase compare
RALBFv3_RS06230 -0.9 -0.5 M23 family peptidase compare
RALBFv3_RS16390 -0.9 -6.6 glucose-6-phosphate dehydrogenase compare
RALBFv3_RS12675 -0.9 -4.6 EpsG family protein compare
RALBFv3_RS10175 -0.9 -3.4 LysR family transcriptional regulator compare
RALBFv3_RS06015 -0.9 -1.3 carbohydrate kinase family protein compare
RALBFv3_RS04660 -0.8 -1.3 CDP-6-deoxy-delta-3,4-glucoseen reductase compare
RALBFv3_RS11755 -0.8 -2.2 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA compare
RALBFv3_RS10430 -0.8 -1.0 YbaK/EbsC family protein compare
RALBFv3_RS18340 -0.8 -1.2 ArsR family transcriptional regulator compare
RALBFv3_RS01700 -0.8 -1.6 exodeoxyribonuclease III compare
RALBFv3_RS05110 -0.8 -2.1 N-acetylmuramoyl-L-alanine amidase compare
RALBFv3_RS18350 -0.8 -1.5 arsenate reductase ArsC compare
RALBFv3_RS18165 -0.8 -2.0 permease compare
RALBFv3_RS05140 -0.8 -2.2 site-specific tyrosine recombinase XerD compare
RALBFv3_RS09150 -0.8 -1.5 hydrolase compare
RALBFv3_RS12030 -0.8 -4.8 succinate--CoA ligase subunit alpha compare
RALBFv3_RS13015 -0.8 -1.4 peroxiredoxin compare
RALBFv3_RS00260 -0.8 -4.8 S58 family peptidase compare
RALBFv3_RS11240 -0.8 -2.7 MFS transporter compare
RALBFv3_RS03880 -0.8 -0.9 hypothetical protein compare
RALBFv3_RS10845 -0.8 -1.3 nitrogen regulatory protein P-II 1 compare
RALBFv3_RS18415 -0.8 -1.3 MarR family transcriptional regulator compare
RALBFv3_RS10560 -0.8 -0.5 thiol:disulfide interchange protein DsbA/DsbL compare
RALBFv3_RS10470 -0.8 -2.1 enoyl-CoA hydratase compare
RALBFv3_RS00340 -0.8 -0.9 cell division protein FtsZ compare
RALBFv3_RS21460 -0.8 -5.1 TonB-dependent siderophore receptor compare
RALBFv3_RS11390 -0.8 -0.5 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF compare
RALBFv3_RS00230 -0.8 -0.8 MurR/RpiR family transcriptional regulator compare
RALBFv3_RS14740 -0.8 -1.4 single-stranded-DNA-specific exonuclease RecJ compare
RALBFv3_RS17865 -0.8 -1.9 DeoR/GlpR transcriptional regulator compare
RALBFv3_RS14495 -0.8 -2.4 DNA repair protein RecO compare
RALBFv3_RS09605 -0.7 -2.2 copper chaperone PCu(A)C compare
RALBFv3_RS07030 -0.7 -2.5 cytochrome c4 compare
RALBFv3_RS11425 -0.7 -0.8 HIT family protein compare
RALBFv3_RS02455 -0.7 -1.1 membrane protein compare
RALBFv3_RS09675 -0.7 -3.4 tyrosine recombinase XerC compare
RALBFv3_RS00365 -0.7 -2.0 [protein-PII] uridylyltransferase compare
RALBFv3_RS06615 -0.7 -1.1 glucan biosynthesis protein D compare
RALBFv3_RS21275 -0.7 -1.1 hypothetical protein compare
RALBFv3_RS15980 -0.7 -2.1 hypothetical protein compare
RALBFv3_RS06485 -0.7 -1.0 anthranilate synthase component I compare
RALBFv3_RS04520 -0.7 -3.3 DUF541 domain-containing protein compare
RALBFv3_RS09845 -0.7 -0.8 multifunctional CCA addition/repair protein compare
RALBFv3_RS13755 -0.7 -3.5 3-phosphoserine/phosphohydroxythreonine transaminase compare
RALBFv3_RS24730 -0.7 -1.2 hypothetical protein compare
RALBFv3_RS10125 -0.7 -2.4 MarR family transcriptional regulator compare
RALBFv3_RS06720 -0.7 -2.7 cytochrome c compare
RALBFv3_RS00635 -0.7 -2.1 ABC-F family ATPase compare
RALBFv3_RS19165 -0.7 -0.6 hypothetical protein compare
RALBFv3_RS10165 -0.7 -2.8 arginase compare
RALBFv3_RS08425 -0.7 -1.4 tRNA-Ala compare
RALBFv3_RS19015 -0.7 -2.7 hypothetical protein compare
RALBFv3_RS02555 -0.7 -2.0 colicin V biosynthesis protein compare
RALBFv3_RS02615 -0.7 -1.6 3-isopropylmalate dehydratase small subunit compare
RALBFv3_RS12025 -0.7 -3.5 ADP-forming succinate--CoA ligase subunit beta compare
RALBFv3_RS07390 -0.7 -4.8 carbohydrate ABC transporter substrate-binding protein compare
RALBFv3_RS12150 -0.7 -1.8 zinc-finger domain-containing protein compare
RALBFv3_RS20565 -0.7 -0.9 cysteine dioxygenase compare
RALBFv3_RS11130 -0.7 -3.7 GTPase compare
RALBFv3_RS23105 -0.7 -0.8 chemotaxis protein CheY compare
RALBFv3_RS20900 -0.7 -2.5 TetR/AcrR family transcriptional regulator compare
RALBFv3_RS21245 -0.7 -3.5 efflux RND transporter periplasmic adaptor subunit compare
RALBFv3_RS24585 -0.6 -0.6 hypothetical protein compare
RALBFv3_RS01545 -0.6 -2.0 RNA-binding transcriptional accessory protein compare
RALBFv3_RS01520 -0.6 -1.5 RluA family pseudouridine synthase compare
RALBFv3_RS06570 -0.6 -1.3 redox-regulated ATPase YchF compare
RALBFv3_RS04640 -0.6 -0.9 MarR family transcriptional regulator compare
RALBFv3_RS01320 -0.6 -2.8 peptidylprolyl isomerase compare
RALBFv3_RS15860 -0.6 -0.4 UDP phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase compare
RALBFv3_RS11900 -0.6 -2.2 hypothetical protein compare
RALBFv3_RS04720 -0.6 -1.1 50S ribosomal protein L33 compare
RALBFv3_RS01110 -0.6 -1.0 gluconate 2-dehydrogenase compare
RALBFv3_RS15225 -0.6 -3.2 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
RALBFv3_RS10435 -0.6 -2.7 hydroxymethylglutaryl-CoA lyase compare
RALBFv3_RS06610 -0.6 -2.9 hypothetical protein compare
RALBFv3_RS03065 -0.6 -1.6 DUF3106 domain-containing protein compare
RALBFv3_RS11545 -0.6 -2.5 LysR family transcriptional regulator compare
RALBFv3_RS10170 -0.6 -1.5 ornithine--oxo-acid transaminase compare
RALBFv3_RS19950 -0.6 -2.0 hypothetical protein compare
RALBFv3_RS00565 -0.6 -0.5 pca operon transcription factor PcaQ compare
RALBFv3_RS00765 -0.6 -0.5 muconate cycloisomerase compare
RALBFv3_RS05505 -0.6 -1.2 CidA/LrgA family protein compare
RALBFv3_RS10995 -0.6 -3.1 SCO family protein compare
RALBFv3_RS24305 -0.6 -1.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Ralstonia solanacearum IBSBF1503 in stress experiments

For stress Ralstonia_antibiotic_mix_minus_Chloramphenicol across organisms