Experiment set15IT096 for Pseudomonas fluorescens FW300-N2E3

Compare to:

D-Glucose

200 most important genes:

  gene name fitness t score description  
AO353_13070 -4.2 -8.5 phosphoserine phosphatase compare
AO353_20695 -3.8 -6.7 O-succinylhomoserine sulfhydrylase compare
AO353_07220 -3.6 -5.4 anthranilate synthase compare
AO353_20625 -3.4 -4.0 3-isopropylmalate dehydratase compare
AO353_20540 -3.3 -10.0 aromatic amino acid aminotransferase compare
AO353_02075 -3.2 -7.2 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_12070 -3.2 -3.8 imidazoleglycerol-phosphate dehydratase compare
AO353_13165 -3.2 -4.4 ATP phosphoribosyltransferase regulatory subunit compare
AO353_20635 -3.2 -10.3 3-isopropylmalate dehydrogenase compare
AO353_08475 -3.0 -7.0 phosphoserine phosphatase compare
AO353_12515 -3.0 -15.5 glutamate synthase compare
AO353_00310 -3.0 -8.5 transaldolase compare
AO353_12520 -3.0 -9.6 glutamate synthase compare
AO353_15900 -3.0 -2.0 GTP-binding protein compare
AO353_07230 -2.9 -13.3 anthranilate synthase compare
AO353_20665 -2.9 -8.7 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO353_12085 -2.9 -5.8 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO353_01375 -2.9 -6.9 phosphate acyltransferase compare
AO353_08185 -2.9 -9.5 methionine biosynthesis protein MetW compare
AO353_12090 -2.8 -1.9 imidazole glycerol phosphate synthase subunit HisF compare
AO353_02685 -2.8 -2.7 phosphoribosylglycinamide formyltransferase compare
AO353_05115 -2.8 -9.4 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO353_12075 -2.7 -4.9 imidazole glycerol phosphate synthase subunit HisH compare
AO353_14505 -2.7 -9.3 ketol-acid reductoisomerase compare
AO353_10670 -2.7 -3.1 shikimate dehydrogenase compare
AO353_20660 -2.6 -3.6 pseudouridine synthase compare
AO353_05110 -2.6 -9.1 histidinol dehydrogenase compare
AO353_08180 -2.6 -10.3 homoserine O-acetyltransferase compare
AO353_01015 -2.5 -2.5 hypothetical protein compare
AO353_10035 -2.5 -7.9 LysR family transcriptional regulator compare
AO353_22800 -2.5 -2.9 sulfite reductase compare
AO353_02070 -2.4 -5.1 prephenate dehydratase compare
AO353_16440 -2.4 -3.6 ArsC family transcriptional regulator compare
AO353_27675 -2.4 -8.5 ATP-dependent Clp protease ATP-binding subunit ClpA compare
AO353_10025 -2.3 -13.6 pyruvate carboxylase subunit B compare
AO353_15925 -2.3 -11.3 2-isopropylmalate synthase compare
AO353_04155 -2.3 -8.8 ornithine carbamoyltransferase compare
AO353_07215 -2.3 -6.7 anthranilate phosphoribosyltransferase compare
AO353_20565 -2.3 -1.5 tRNA-Ala compare
AO353_05080 -2.3 -9.5 sulfate adenylyltransferase compare
AO353_03360 -2.3 -7.9 glucose-6-phosphate dehydrogenase compare
AO353_10710 -2.2 -3.4 tryptophan synthase subunit beta compare
AO353_14485 -2.2 -1.0 pseudouridine synthase compare
AO353_08345 -2.2 -7.3 dihydroxy-acid dehydratase compare
AO353_27650 -2.2 -4.8 cell division protein FtsK compare
AO353_14940 -2.2 -2.1 malate:quinone oxidoreductase compare
AO353_10030 -2.2 -8.2 pyruvate carboxylase subunit A compare
AO353_08780 -2.2 -6.1 5-formyltetrahydrofolate cyclo-ligase compare
AO353_09285 -2.2 -9.8 reactive intermediate/imine deaminase compare
AO353_12360 -2.1 -6.7 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO353_10235 -2.1 -9.6 glycosyltransferase compare
AO353_04105 -2.1 -5.1 argininosuccinate synthase compare
AO353_20620 -2.1 -4.5 isopropylmalate isomerase compare
AO353_05075 -2.0 -8.6 adenylylsulfate kinase compare
AO353_08015 -2.0 -3.4 5,10-methylenetetrahydrofolate reductase compare
AO353_10230 -2.0 -10.1 glycosyltransferase compare
AO353_14595 -2.0 -9.3 carbonate dehydratase compare
AO353_03100 -2.0 -2.6 XRE family transcriptional regulator compare
AO353_23400 -2.0 -2.1 hypothetical protein compare
AO353_00495 -1.9 -1.8 DNA topoisomerase I compare
AO353_02280 -1.9 -1.5 DNA mismatch repair protein MutS compare
AO353_11850 -1.9 -5.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
AO353_01990 -1.9 -6.3 UDP-N-acetylglucosamine 2-epimerase compare
AO353_09040 -1.9 -1.2 diaminopimelate epimerase compare
AO353_07910 -1.8 -2.2 hypothetical protein compare
AO353_16710 -1.8 -2.4 hypothetical protein compare
AO353_26400 -1.8 -4.1 hypothetical protein compare
AO353_08510 -1.8 -2.7 3-phosphoglycerate dehydrogenase compare
AO353_00610 -1.8 -1.2 cytochrome C oxidase Cbb3 compare
AO353_09135 -1.8 -1.2 cytochrome C compare
AO353_09235 -1.8 -6.2 phosphoglucomutase compare
AO353_00520 -1.8 -4.2 universal stress protein UspA compare
AO353_02710 -1.8 -4.9 (p)ppGpp synthetase compare
AO353_12345 -1.7 -1.2 twin-arginine protein translocation system subunit TatC compare
AO353_20860 -1.7 -2.7 hypothetical protein compare
AO353_27680 -1.7 -5.9 ATP-dependent Clp protease adaptor ClpS compare
AO353_03295 -1.7 -10.3 ribonuclease BN compare
AO353_19060 -1.7 -5.3 CysB family transcriptional regulator compare
AO353_02010 -1.7 -5.4 glycosyl transferase family 1 compare
AO353_06455 -1.7 -2.0 D-alanyl-D-alanine carboxypeptidase compare
AO353_10430 -1.7 -2.9 chromosome partitioning protein ParB compare
AO353_00655 -1.7 -6.4 coproporphyrinogen III oxidase compare
AO353_25990 -1.7 -5.0 aspartyl beta-hydroxylase compare
AO353_08505 -1.6 -7.5 FAD-linked oxidase compare
AO353_03585 -1.6 -2.3 ATP-dependent DNA helicase RuvA compare
AO353_09720 -1.6 -1.5 hypothetical protein compare
AO353_21175 -1.6 -2.6 hypothetical protein compare
AO353_14495 -1.6 -5.2 acetolactate synthase 3 catalytic subunit compare
AO353_14500 -1.6 -3.8 acetolactate synthase 3 regulatory subunit compare
AO353_14380 -1.6 -3.6 pantoate--beta-alanine ligase compare
AO353_03430 -1.6 -2.8 methylglyoxal synthase compare
AO353_07210 -1.6 -3.8 indole-3-glycerol-phosphate synthase compare
AO353_24120 -1.6 -2.0 hypothetical protein compare
AO353_17995 -1.6 -4.8 hypothetical protein compare
AO353_07610 -1.6 -0.9 hypothetical protein compare
AO353_18925 -1.6 -1.6 ATPase compare
AO353_14385 -1.6 -3.8 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
AO353_01985 -1.6 -7.4 hypothetical protein compare
AO353_23495 -1.6 -2.0 SAM-dependent methyltransferase compare
AO353_10440 -1.5 -3.2 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG compare
AO353_03245 -1.5 -6.7 permease DsdX compare
AO353_07315 -1.5 -2.2 rRNA methyltransferase compare
AO353_24915 -1.5 -2.5 hypothetical protein compare
AO353_06415 -1.5 -3.5 hypothetical protein compare
AO353_14115 -1.5 -4.8 gamma-glutamyl kinase compare
AO353_01975 -1.5 -6.0 glycosyl transferase compare
AO353_12150 -1.5 -4.0 histidine kinase compare
AO353_21290 -1.5 -2.3 hypothetical protein compare
AO353_12055 -1.5 -4.2 cell envelope biogenesis protein AsmA compare
AO353_02015 -1.5 -5.0 acetyltransferase compare
AO353_01410 -1.5 -1.0 ribonuclease E compare
AO353_24830 -1.5 -2.1 enoyl-CoA hydratase compare
AO353_19085 -1.5 -2.3 organic hydroperoxide resistance protein compare
AO353_17675 -1.5 -3.8 hypothetical protein compare
AO353_16940 -1.5 -3.2 deoxycytidine triphosphate deaminase compare
AO353_20200 -1.5 -3.1 peptidylprolyl isomerase compare
AO353_03630 -1.5 -8.2 porin compare
AO353_02175 -1.5 -2.4 carbon storage regulator compare
AO353_04365 -1.4 -3.8 recombinase XerD compare
AO353_27710 -1.4 -1.4 DNA repair protein compare
AO353_12940 -1.4 -4.5 glycosyl transferase compare
AO353_10170 -1.4 -7.0 fatty acid methyltransferase compare
AO353_10985 -1.4 -2.4 hypothetical protein compare
AO353_10875 -1.4 -3.9 copper-binding protein compare
AO353_10780 -1.4 -1.6 DNA-binding protein compare
AO353_02970 -1.4 -1.8 carbon storage regulator compare
AO353_02300 -1.4 -2.4 MarR family transcriptional regulator compare
AO353_12510 -1.4 -7.9 cell division protein compare
AO353_06480 -1.4 -2.5 50S rRNA methyltransferase compare
AO353_08910 -1.4 -1.8 hypothetical protein compare
AO353_08350 -1.4 -5.9 hypothetical protein compare
AO353_00235 -1.4 -2.4 transcriptional regulator compare
AO353_27215 -1.4 -2.9 hypothetical protein compare
AO353_21455 -1.4 -1.5 cation:proton antiporter compare
AO353_19770 -1.4 -1.7 peptidase compare
AO353_08165 -1.3 -2.0 pyrroline-5-carboxylate reductase compare
AO353_28640 -1.3 -2.4 hypothetical protein compare
AO353_02025 -1.3 -6.8 mannose-1-phosphate guanyltransferase compare
AO353_25720 -1.3 -3.1 peroxidase compare
AO353_18705 -1.3 -3.0 anti-anti-sigma factor compare
AO353_06325 -1.3 -2.0 hypothetical protein compare
AO353_27995 -1.3 -2.9 RpiR family transcriptional regulator compare
AO353_11455 -1.3 -1.6 hypothetical protein compare
AO353_28930 -1.3 -1.7 hypothetical protein compare
AO353_26100 -1.3 -2.1 lysozyme compare
AO353_06460 -1.3 -3.8 hypothetical protein compare
AO353_03020 -1.3 -4.9 arginine N-succinyltransferase compare
AO353_25845 -1.3 -2.2 GNAT family acetyltransferase compare
AO353_01355 -1.3 -3.6 3-oxoacyl-ACP synthase compare
AO353_06320 -1.3 -2.6 AsnC family transcriptional regulator compare
AO353_15185 -1.3 -2.4 ATPase compare
AO353_27330 -1.3 -4.0 hypothetical protein compare
AO353_09045 -1.3 -1.6 hypothetical protein compare
AO353_05105 -1.3 -6.3 histidinol-phosphate aminotransferase compare
AO353_02000 -1.2 -2.8 polysaccharide/polyol phosphate ABC transporter ATP-binding protein compare
AO353_18830 -1.2 -3.3 chemotaxis protein CheW compare
AO353_02720 -1.2 -3.8 cysteine synthase compare
AO353_11165 -1.2 -6.1 hypothetical protein compare
AO353_00750 -1.2 -3.1 GntR family transcriptional regulator compare
AO353_24190 -1.2 -2.4 hypothetical protein compare
AO353_08685 -1.2 -2.3 N-acetylglutamate synthase compare
AO353_15560 -1.2 -3.1 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) compare
AO353_03545 -1.2 -4.9 hypothetical protein compare
AO353_03415 -1.2 -3.8 glucokinase compare
AO353_17165 -1.2 -1.4 ATP-dependent helicase compare
AO353_23840 -1.2 -2.9 hypothetical protein compare
AO353_17250 -1.2 -2.3 nitrile hydratase compare
AO353_03670 -1.2 -2.6 ornithine acetyltransferase compare
AO353_17645 -1.2 -6.0 peptidase M48 compare
AO353_23220 -1.2 -1.5 hypothetical protein compare
AO353_12365 -1.2 -2.0 phosphoribosyl-AMP cyclohydrolase compare
AO353_20630 -1.2 -5.7 SAM-dependent methyltransferase compare
AO353_13640 -1.2 -2.0 histidine kinase compare
AO353_12270 -1.2 -2.6 histidine ammonia-lyase compare
AO353_13160 -1.2 -1.7 membrane protease HflC compare
AO353_02765 -1.2 -2.3 NAD(P)H-quinone oxidoreductase compare
AO353_06795 -1.2 -1.3 Isochorismatase compare
AO353_16845 -1.2 -5.8 LysR family transcriptional regulator compare
AO353_04445 -1.2 -2.4 GntR family transcriptional regulator compare
AO353_20340 -1.2 -2.4 gamma-carboxygeranoyl-CoA hydratase compare
AO353_02755 -1.1 -5.4 peroxiredoxin compare
AO353_13945 -1.1 -3.9 ubiquinol oxidase subunit II compare
AO353_21750 -1.1 -1.7 peptidylprolyl isomerase compare
AO353_03425 -1.1 -5.5 glyceraldehyde-3-phosphate dehydrogenase compare
AO353_12845 -1.1 -5.1 peptide methionine sulfoxide reductase compare
AO353_23170 -1.1 -3.0 short-chain dehydrogenase compare
AO353_15250 -1.1 -1.1 cytochrome B compare
AO353_19565 -1.1 -1.8 vanillate O-demethylase oxidoreductase VanB compare
AO353_15410 -1.1 -1.5 hypothetical protein compare
AO353_14860 -1.1 -2.4 hypoxanthine-guanine phosphoribosyltransferase compare
AO353_03715 -1.1 -1.4 H-NS histone compare
AO353_25260 -1.1 -3.3 hypothetical protein compare
AO353_21055 -1.1 -2.7 glycosyl hydrolase compare
AO353_26945 -1.1 -1.6 transcriptional regulator compare
AO353_03985 -1.1 -3.7 imelysin compare
AO353_19090 -1.1 -1.2 MarR family transcriptional regulator compare
AO353_08885 -1.1 -8.9 polyphosphate kinase compare
AO353_20170 -1.1 -1.7 trigger factor compare
AO353_08265 -1.1 -2.8 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
AO353_10725 -1.1 -0.8 dodecin flavoprotein compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source D-Glucose in Pseudomonas fluorescens FW300-N2E3

For carbon source D-Glucose across organisms