Experiment set15IT095 for Pseudomonas fluorescens FW300-N2E3

Compare to:

L-Citrulline

200 most important genes:

  gene name fitness t score description  
AO353_02995 -4.5 -7.6 succinylglutamate desuccinylase compare
AO353_09045 -3.9 -2.0 hypothetical protein compare
AO353_20540 -3.7 -8.8 aromatic amino acid aminotransferase compare
AO353_11850 -3.5 -4.1 3'(2'),5'-bisphosphate nucleotidase CysQ compare
AO353_07220 -3.4 -4.0 anthranilate synthase compare
AO353_16530 -3.4 -1.8 ribonuclease HII compare
AO353_13070 -3.4 -10.3 phosphoserine phosphatase compare
AO353_20695 -3.3 -5.0 O-succinylhomoserine sulfhydrylase compare
AO353_18715 -3.3 -1.7 histidine kinase compare
AO353_25640 -3.2 -2.2 AsnC family transcriptional regulator compare
AO353_20635 -3.2 -8.5 3-isopropylmalate dehydrogenase compare
AO353_03010 -3.2 -5.6 succinylglutamate-semialdehyde dehydrogenase compare
AO353_27130 -3.1 -2.7 hypothetical protein compare
AO353_25630 -3.1 -7.5 arginine N-succinyltransferase compare
AO353_08185 -3.1 -5.6 methionine biosynthesis protein MetW compare
AO353_02280 -3.1 -1.9 DNA mismatch repair protein MutS compare
AO353_20625 -3.1 -3.7 3-isopropylmalate dehydratase compare
AO353_12085 -3.1 -3.0 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO353_02100 -3.0 -4.5 phosphoglycolate phosphatase compare
AO353_07230 -2.9 -9.8 anthranilate synthase compare
AO353_22195 -2.9 -2.1 metal ABC transporter permease compare
AO353_07215 -2.9 -3.4 anthranilate phosphoribosyltransferase compare
AO353_05115 -2.8 -7.3 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO353_13165 -2.8 -4.3 ATP phosphoribosyltransferase regulatory subunit compare
AO353_27650 -2.7 -2.6 cell division protein FtsK compare
AO353_14505 -2.7 -7.4 ketol-acid reductoisomerase compare
AO353_12070 -2.7 -5.5 imidazoleglycerol-phosphate dehydratase compare
AO353_01375 -2.7 -6.1 phosphate acyltransferase compare
AO353_09030 -2.7 -1.1 iron donor protein CyaY compare
AO353_22800 -2.7 -1.8 sulfite reductase compare
AO353_07210 -2.7 -3.6 indole-3-glycerol-phosphate synthase compare
AO353_07560 -2.6 -10.3 malate synthase G compare
AO353_02600 -2.6 -2.8 alpha-ribazole phosphatase compare
AO353_25845 -2.6 -3.0 GNAT family acetyltransferase compare
AO353_02075 -2.6 -8.7 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_05110 -2.6 -8.3 histidinol dehydrogenase compare
AO353_08180 -2.6 -9.0 homoserine O-acetyltransferase compare
AO353_12090 -2.6 -1.7 imidazole glycerol phosphate synthase subunit HisF compare
AO353_14150 -2.5 -1.7 peptidylprolyl isomerase compare
AO353_14990 -2.5 -2.2 hypothetical protein compare
AO353_23350 -2.5 -3.3 hypothetical protein compare
AO353_08475 -2.5 -6.8 phosphoserine phosphatase compare
AO353_10670 -2.5 -2.4 shikimate dehydrogenase compare
AO353_12075 -2.5 -4.2 imidazole glycerol phosphate synthase subunit HisH compare
AO353_20665 -2.5 -7.9 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO353_11775 -2.5 -5.3 phosphoenolpyruvate carboxykinase [ATP] compare
AO353_06460 -2.5 -6.3 hypothetical protein compare
AO353_10235 -2.5 -6.2 glycosyltransferase compare
AO353_08345 -2.5 -6.1 dihydroxy-acid dehydratase compare
AO353_03035 -2.5 -4.6 AraC family transcriptional regulator compare
AO353_14595 -2.4 -7.3 carbonate dehydratase compare
AO353_20620 -2.4 -5.7 isopropylmalate isomerase compare
AO353_03025 -2.4 -3.3 acetylornithine aminotransferase compare
AO353_25645 -2.4 -5.7 amino acid transporter conserved
AO353_15410 -2.3 -1.7 hypothetical protein compare
AO353_27995 -2.3 -4.1 RpiR family transcriptional regulator compare
AO353_12365 -2.3 -2.7 phosphoribosyl-AMP cyclohydrolase compare
AO353_01550 -2.3 -3.8 hypothetical protein compare
AO353_20565 -2.3 -1.3 tRNA-Ala compare
AO353_20660 -2.3 -3.4 pseudouridine synthase compare
AO353_07445 -2.3 -1.6 pyrroloquinoline quinone biosynthesis protein PqqD compare
AO353_00865 -2.3 -7.5 phosphoenolpyruvate synthase compare
AO353_01350 -2.2 -5.4 4-amino-4-deoxychorismate lyase compare
AO353_25635 -2.2 -5.3 citrulline utilization hydrolase (from data) conserved
AO353_02070 -2.2 -4.2 prephenate dehydratase compare
AO353_09875 -2.2 -1.8 hypothetical protein compare
AO353_26945 -2.2 -2.1 transcriptional regulator compare
AO353_14485 -2.2 -0.9 pseudouridine synthase compare
AO353_10030 -2.2 -7.2 pyruvate carboxylase subunit A compare
AO353_21905 -2.1 -3.2 hypothetical protein compare
AO353_22820 -2.1 -14.3 NAD-glutamate dehydrogenase compare
AO353_00125 -2.1 -2.2 hypothetical protein compare
AO353_04220 -2.1 -5.3 chemotaxis protein CheY compare
AO353_02015 -2.1 -6.8 acetyltransferase compare
AO353_16835 -2.1 -2.3 LuxR family transcriptional regulator compare
AO353_08885 -2.1 -15.2 polyphosphate kinase compare
AO353_22375 -2.1 -3.3 cytochrome c-550 PedF compare
AO353_07315 -2.1 -2.0 rRNA methyltransferase compare
AO353_12240 -2.0 -5.1 histidine utilization repressor compare
AO353_06275 -2.0 -2.3 DNA polymerase III subunit epsilon compare
AO353_15925 -2.0 -8.5 2-isopropylmalate synthase compare
AO353_08780 -2.0 -5.6 5-formyltetrahydrofolate cyclo-ligase compare
AO353_10035 -2.0 -7.0 LysR family transcriptional regulator compare
AO353_27675 -2.0 -7.6 ATP-dependent Clp protease ATP-binding subunit ClpA compare
AO353_03630 -2.0 -8.1 porin compare
AO353_10710 -2.0 -3.3 tryptophan synthase subunit beta compare
AO353_22500 -2.0 -1.5 hypothetical protein compare
AO353_03015 -2.0 -2.7 arginine N-succinyltransferase compare
AO353_08350 -2.0 -5.3 hypothetical protein compare
AO353_05075 -2.0 -7.8 adenylylsulfate kinase compare
AO353_07105 -1.9 -1.0 biotin--protein ligase compare
AO353_03290 -1.9 -2.0 peptide deformylase compare
AO353_04105 -1.9 -4.2 argininosuccinate synthase compare
AO353_03820 -1.9 -3.4 Asp/Glu/hydantoin racemase compare
AO353_07290 -1.9 -7.0 mannose-1-phosphate guanylyltransferase compare
AO353_00750 -1.9 -3.5 GntR family transcriptional regulator compare
AO353_00235 -1.9 -2.6 transcriptional regulator compare
AO353_05880 -1.9 -1.6 plasmid stabilization protein compare
AO353_03060 -1.9 -14.2 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) compare
AO353_05080 -1.9 -8.2 sulfate adenylyltransferase compare
AO353_00430 -1.9 -2.2 glyceraldehyde-3-phosphate dehydrogenase compare
AO353_12360 -1.8 -6.1 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO353_20840 -1.8 -2.4 ribose pyranase compare
AO353_09285 -1.8 -8.2 reactive intermediate/imine deaminase compare
AO353_27735 -1.8 -6.1 isocitrate lyase compare
AO353_04955 -1.8 -5.4 dihydrofolate reductase compare
AO353_24605 -1.8 -2.4 hypothetical protein compare
AO353_18000 -1.8 -6.1 allophanate hydrolase compare
AO353_23745 -1.8 -4.7 acetylglucosaminylphosphatidylinositol deacetylase compare
AO353_03815 -1.8 -1.1 heme utilization protein compare
AO353_05105 -1.8 -7.9 histidinol-phosphate aminotransferase compare
AO353_08510 -1.8 -2.1 3-phosphoglycerate dehydrogenase compare
AO353_09235 -1.8 -6.4 phosphoglucomutase compare
AO353_08015 -1.7 -2.4 5,10-methylenetetrahydrofolate reductase compare
AO353_20340 -1.7 -2.6 gamma-carboxygeranoyl-CoA hydratase compare
AO353_17165 -1.7 -1.7 ATP-dependent helicase compare
AO353_10705 -1.7 -2.0 tryptophan synthase subunit alpha compare
AO353_26125 -1.7 -3.8 hypothetical protein compare
AO353_24340 -1.7 -1.5 TetR family transcriptional regulator compare
AO353_01985 -1.7 -7.3 hypothetical protein compare
AO353_12460 -1.7 -3.4 malate dehydrogenase compare
AO353_04665 -1.7 -7.9 ATPase compare
AO353_18485 -1.7 -3.5 nitroreductase compare
AO353_10025 -1.7 -9.7 pyruvate carboxylase subunit B compare
AO353_27435 -1.7 -1.2 hypothetical protein compare
AO353_12710 -1.7 -1.1 thioredoxin compare
AO353_00510 -1.7 -5.1 multifunctional fatty acid oxidation complex subunit alpha compare
AO353_16940 -1.6 -1.6 deoxycytidine triphosphate deaminase compare
AO353_23400 -1.6 -2.3 hypothetical protein compare
AO353_05535 -1.6 -1.1 tRNA-Thr compare
AO353_19250 -1.6 -2.1 molybdenum cofactor guanylyltransferase compare
AO353_10170 -1.6 -6.0 fatty acid methyltransferase compare
AO353_02010 -1.6 -4.7 glycosyl transferase family 1 compare
AO353_16030 -1.6 -3.2 peptidase inhibitor I42 compare
AO353_10230 -1.6 -8.9 glycosyltransferase compare
AO353_20175 -1.6 -1.1 ATP-dependent Clp protease proteolytic subunit compare
AO353_20000 -1.6 -2.8 phosphoribosyltransferase compare
AO353_18120 -1.6 -2.2 hypothetical protein compare
AO353_19090 -1.6 -1.1 MarR family transcriptional regulator compare
AO353_00810 -1.6 -2.2 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) compare
AO353_06480 -1.6 -2.2 50S rRNA methyltransferase compare
AO353_08050 -1.6 -4.2 16S rRNA methyltransferase compare
AO353_25680 -1.6 -2.7 2-methylbutanoyl-CoA dehydrogenase / butanoyl-CoA dehydrogenase / isobutyryl-CoA dehydrogenase (EC 1.3.8.1; EC 1.3.8.5) (from data) compare
AO353_00115 -1.6 -1.9 hypothetical protein compare
AO353_09040 -1.6 -0.9 diaminopimelate epimerase compare
AO353_20680 -1.6 -3.5 cell division protein compare
AO353_18700 -1.6 -2.5 flagellar biogenesis protein compare
AO353_15830 -1.6 -2.3 transcriptional regulator compare
AO353_09885 -1.6 -1.7 transcriptional regulator PhoU compare
AO353_12510 -1.5 -7.9 cell division protein compare
AO353_10430 -1.5 -2.9 chromosome partitioning protein ParB compare
AO353_18960 -1.5 -2.1 terminase compare
AO353_09050 -1.5 -2.1 recombinase XerC compare
AO353_01975 -1.5 -5.1 glycosyl transferase compare
AO353_03055 -1.5 -4.9 ABC transporter for L-Arginine and L-Citrulline, periplasmic substrate-binding component (from data) compare
AO353_19015 -1.5 -8.6 hypothetical protein compare
AO353_27680 -1.5 -3.8 ATP-dependent Clp protease adaptor ClpS compare
AO353_26045 -1.5 -1.9 hypothetical protein compare
AO353_25955 -1.5 -2.8 NIPSNAP family containing protein compare
AO353_27380 -1.5 -1.7 pyocin R2, holin compare
AO353_19160 -1.5 -4.2 glutathione peroxidase compare
AO353_07610 -1.5 -0.8 hypothetical protein compare
AO353_03590 -1.5 -1.4 crossover junction endodeoxyribonuclease RuvC compare
AO353_26900 -1.5 -4.6 glycerate kinase compare
AO353_03275 -1.5 -1.9 LysR family transcriptional regulator compare
AO353_09150 -1.5 -2.4 cytochrome C2 compare
AO353_03660 -1.5 -3.4 hypothetical protein compare
AO353_04365 -1.4 -3.3 recombinase XerD compare
AO353_11940 -1.4 -2.3 hypothetical protein compare
AO353_27180 -1.4 -1.8 peptidase M48, Ste24p compare
AO353_25945 -1.4 -3.3 hypothetical protein compare
AO353_03585 -1.4 -2.2 ATP-dependent DNA helicase RuvA compare
AO353_16745 -1.4 -1.7 ArsR family transcriptional regulator compare
AO353_02250 -1.4 -1.6 chorismate synthase compare
AO353_03000 -1.4 -1.9 topoisomerase II compare
AO353_13925 -1.4 -1.7 XRE family transcriptional regulator compare
AO353_00655 -1.4 -5.3 coproporphyrinogen III oxidase compare
AO353_05415 -1.4 -1.7 hypothetical protein compare
AO353_19060 -1.4 -4.3 CysB family transcriptional regulator compare
AO353_13160 -1.4 -1.3 membrane protease HflC compare
AO353_20800 -1.4 -1.2 hypothetical protein compare
AO353_25700 -1.4 -2.8 hypothetical protein compare
AO353_04340 -1.4 -2.5 hypothetical protein compare
AO353_24275 -1.4 -1.7 transcriptional regulator compare
AO353_11165 -1.4 -6.3 hypothetical protein compare
AO353_19020 -1.4 -1.8 hypothetical protein compare
AO353_07295 -1.4 -8.5 aminoglycoside phosphotransferase compare
AO353_13050 -1.4 -2.9 DNA topoisomerase IV compare
AO353_06355 -1.4 -2.8 thiamine-phosphate pyrophosphorylase compare
AO353_22370 -1.4 -2.4 branched-chain amino acid ABC transporter substrate-binding protein compare
AO353_15825 -1.3 -1.9 serine acetyltransferase compare
AO353_24395 -1.3 -4.2 alkylhydroperoxidase compare
AO353_23280 -1.3 -2.5 hypothetical protein compare
AO353_01970 -1.3 -6.3 hypothetical protein compare
AO353_20815 -1.3 -2.7 LacI family transcriptional regulator compare
AO353_06140 -1.3 -4.4 MFS transporter compare
AO353_02970 -1.3 -1.8 carbon storage regulator compare
AO353_14940 -1.3 -1.8 malate:quinone oxidoreductase compare
AO353_16440 -1.3 -2.9 ArsC family transcriptional regulator compare
AO353_08105 -1.3 -3.1 pilus assembly protein PilG compare


Specific Phenotypes

For 11 genes in this experiment

For carbon source L-Citrulline in Pseudomonas fluorescens FW300-N2E3

For carbon source L-Citrulline across organisms