Experiment set15IT094 for Pseudomonas fluorescens FW300-N2E3

Compare to:

L-Citrulline

200 most important genes:

  gene name fitness t score description  
AO353_02995 -4.3 -8.7 succinylglutamate desuccinylase compare
AO353_25630 -3.7 -6.2 arginine N-succinyltransferase compare
AO353_03055 -3.7 -7.0 ABC transporter for L-Arginine and L-Citrulline, periplasmic substrate-binding component (from data) compare
AO353_13165 -3.6 -3.5 ATP phosphoribosyltransferase regulatory subunit compare
AO353_25635 -3.6 -6.4 citrulline utilization hydrolase (from data) conserved
AO353_20540 -3.5 -9.7 aromatic amino acid aminotransferase compare
AO353_20625 -3.4 -3.3 3-isopropylmalate dehydratase compare
AO353_03035 -3.4 -3.3 AraC family transcriptional regulator compare
AO353_20635 -3.4 -9.0 3-isopropylmalate dehydrogenase compare
AO353_09720 -3.3 -1.6 hypothetical protein compare
AO353_05115 -3.3 -6.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO353_08475 -3.3 -5.4 phosphoserine phosphatase compare
AO353_13070 -3.2 -10.0 phosphoserine phosphatase compare
AO353_25640 -3.2 -2.2 AsnC family transcriptional regulator compare
AO353_11850 -3.2 -5.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
AO353_27675 -3.2 -6.1 ATP-dependent Clp protease ATP-binding subunit ClpA compare
AO353_20665 -3.1 -7.3 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO353_08185 -3.1 -7.8 methionine biosynthesis protein MetW compare
AO353_15925 -3.1 -10.4 2-isopropylmalate synthase compare
AO353_12070 -3.1 -3.7 imidazoleglycerol-phosphate dehydratase compare
AO353_20695 -3.0 -5.8 O-succinylhomoserine sulfhydrylase compare
AO353_16425 -3.0 -2.0 Fe-S metabolism protein SufE compare
AO353_07230 -3.0 -11.7 anthranilate synthase compare
AO353_07645 -3.0 -1.5 sarcosine oxidase subunit gamma compare
AO353_15900 -2.8 -1.9 GTP-binding protein compare
AO353_10670 -2.8 -2.0 shikimate dehydrogenase compare
AO353_07560 -2.8 -11.1 malate synthase G compare
AO353_00455 -2.8 -3.5 beta-hexosaminidase compare
AO353_07220 -2.8 -6.4 anthranilate synthase compare
AO353_23790 -2.8 -3.1 metal-binding protein compare
AO353_21645 -2.8 -3.2 cobalt transporter compare
AO353_24605 -2.7 -2.7 hypothetical protein compare
AO353_20620 -2.7 -5.9 isopropylmalate isomerase compare
AO353_03025 -2.7 -2.6 acetylornithine aminotransferase compare
AO353_12090 -2.7 -1.8 imidazole glycerol phosphate synthase subunit HisF compare
AO353_08345 -2.7 -6.8 dihydroxy-acid dehydratase compare
AO353_08180 -2.7 -9.9 homoserine O-acetyltransferase compare
AO353_11775 -2.7 -5.1 phosphoenolpyruvate carboxykinase [ATP] compare
AO353_02075 -2.6 -8.4 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_27335 -2.6 -2.8 hypothetical protein compare
AO353_04220 -2.6 -5.2 chemotaxis protein CheY compare
AO353_12360 -2.6 -7.0 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO353_10035 -2.6 -7.3 LysR family transcriptional regulator compare
AO353_14505 -2.5 -9.6 ketol-acid reductoisomerase compare
AO353_07610 -2.5 -1.1 hypothetical protein compare
AO353_10235 -2.5 -7.1 glycosyltransferase compare
AO353_07215 -2.5 -5.8 anthranilate phosphoribosyltransferase compare
AO353_00750 -2.5 -3.4 GntR family transcriptional regulator compare
AO353_05105 -2.5 -8.5 histidinol-phosphate aminotransferase compare
AO353_05110 -2.5 -8.9 histidinol dehydrogenase compare
AO353_01375 -2.4 -6.5 phosphate acyltransferase compare
AO353_06725 -2.4 -1.9 hypothetical protein compare
AO353_06460 -2.4 -7.1 hypothetical protein compare
AO353_24830 -2.4 -3.3 enoyl-CoA hydratase compare
AO353_19020 -2.4 -3.4 hypothetical protein compare
AO353_10030 -2.4 -7.1 pyruvate carboxylase subunit A compare
AO353_22820 -2.4 -14.7 NAD-glutamate dehydrogenase compare
AO353_10710 -2.3 -2.8 tryptophan synthase subunit beta compare
AO353_10430 -2.3 -2.7 chromosome partitioning protein ParB compare
AO353_12075 -2.3 -6.0 imidazole glycerol phosphate synthase subunit HisH compare
AO353_02070 -2.3 -4.1 prephenate dehydratase compare
AO353_12365 -2.3 -3.1 phosphoribosyl-AMP cyclohydrolase compare
AO353_19500 -2.3 -3.4 peptidase S8 and S53 subtilisin kexin sedolisin compare
AO353_14485 -2.3 -0.9 pseudouridine synthase compare
AO353_03630 -2.3 -7.7 porin compare
AO353_00430 -2.3 -1.6 glyceraldehyde-3-phosphate dehydrogenase compare
AO353_25925 -2.3 -1.5 hypothetical protein compare
AO353_07290 -2.2 -9.2 mannose-1-phosphate guanylyltransferase compare
AO353_01350 -2.2 -5.3 4-amino-4-deoxychorismate lyase compare
AO353_00865 -2.2 -8.0 phosphoenolpyruvate synthase compare
AO353_28565 -2.2 -3.2 hypothetical protein compare
AO353_25645 -2.2 -5.4 amino acid transporter conserved
AO353_19770 -2.2 -2.7 peptidase compare
AO353_10230 -2.2 -9.7 glycosyltransferase compare
AO353_22800 -2.2 -2.6 sulfite reductase compare
AO353_14595 -2.2 -8.5 carbonate dehydratase compare
AO353_06100 -2.2 -1.8 thymidylate synthase compare
AO353_07210 -2.2 -4.7 indole-3-glycerol-phosphate synthase compare
AO353_09745 -2.2 -1.7 hypothetical protein compare
AO353_07460 -2.1 -2.9 DNA-binding protein compare
AO353_20660 -2.1 -3.5 pseudouridine synthase compare
AO353_03015 -2.1 -2.9 arginine N-succinyltransferase compare
AO353_19085 -2.1 -2.2 organic hydroperoxide resistance protein compare
AO353_03060 -2.1 -15.4 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) compare
AO353_21400 -2.1 -2.0 conjugal transfer protein TraR compare
AO353_23495 -2.1 -1.8 SAM-dependent methyltransferase compare
AO353_04665 -2.1 -9.0 ATPase compare
AO353_02010 -2.0 -6.1 glycosyl transferase family 1 compare
AO353_03010 -2.0 -4.0 succinylglutamate-semialdehyde dehydrogenase compare
AO353_29145 -2.0 -4.0 HxlR family transcriptional regulator compare
AO353_10025 -2.0 -10.8 pyruvate carboxylase subunit B compare
AO353_13575 -2.0 -3.0 hypothetical protein compare
AO353_01985 -2.0 -8.2 hypothetical protein compare
AO353_05075 -2.0 -8.1 adenylylsulfate kinase compare
AO353_04105 -2.0 -4.7 argininosuccinate synthase compare
AO353_03545 -2.0 -7.0 hypothetical protein compare
AO353_18000 -2.0 -6.4 allophanate hydrolase compare
AO353_08130 -2.0 -2.1 uracil phosphoribosyltransferase compare
AO353_12085 -2.0 -5.7 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO353_05080 -1.9 -8.6 sulfate adenylyltransferase compare
AO353_03410 -1.9 -2.3 chemotaxis protein CheY compare
AO353_14585 -1.9 -3.1 ribosomal-protein-alanine acetyltransferase compare
AO353_23620 -1.9 -1.9 hypothetical protein compare
AO353_27650 -1.9 -3.6 cell division protein FtsK compare
AO353_03290 -1.9 -2.1 peptide deformylase compare
AO353_23600 -1.9 -4.0 cobalt chelatase compare
AO353_18005 -1.9 -4.7 allophanate hydrolase compare
AO353_02100 -1.9 -4.0 phosphoglycolate phosphatase compare
AO353_13925 -1.9 -1.9 XRE family transcriptional regulator compare
AO353_09885 -1.9 -2.4 transcriptional regulator PhoU compare
AO353_26125 -1.8 -3.2 hypothetical protein compare
AO353_13610 -1.8 -3.4 precorrin isomerase compare
AO353_20200 -1.8 -3.0 peptidylprolyl isomerase compare
AO353_01550 -1.8 -4.5 hypothetical protein compare
AO353_14795 -1.8 -3.7 molybdopterin-synthase adenylyltransferase compare
AO353_15830 -1.8 -2.0 transcriptional regulator compare
AO353_15185 -1.8 -1.7 ATPase compare
AO353_08080 -1.8 -5.6 chemotaxis protein compare
AO353_12460 -1.8 -4.4 malate dehydrogenase compare
AO353_08885 -1.8 -13.8 polyphosphate kinase compare
AO353_00655 -1.8 -5.7 coproporphyrinogen III oxidase compare
AO353_14500 -1.8 -4.0 acetolactate synthase 3 regulatory subunit compare
AO353_18325 -1.8 -2.2 hypothetical protein compare
AO353_27995 -1.7 -3.8 RpiR family transcriptional regulator compare
AO353_26220 -1.7 -3.0 hypothetical protein compare
AO353_09040 -1.7 -1.0 diaminopimelate epimerase compare
AO353_03000 -1.7 -2.1 topoisomerase II compare
AO353_25845 -1.7 -2.3 GNAT family acetyltransferase compare
AO353_09345 -1.7 -2.2 hypothetical protein compare
AO353_00955 -1.7 -1.3 cytotoxic translational repressor of toxin-antitoxin stability system compare
AO353_20175 -1.7 -1.2 ATP-dependent Clp protease proteolytic subunit compare
AO353_22375 -1.7 -3.4 cytochrome c-550 PedF compare
AO353_11255 -1.7 -3.5 RND transporter compare
AO353_20565 -1.7 -1.1 tRNA-Ala compare
AO353_03005 -1.7 -4.2 succinylarginine dihydrolase compare
AO353_08510 -1.7 -3.3 3-phosphoglycerate dehydrogenase compare
AO353_04565 -1.7 -2.8 nucleoid-associated protein compare
AO353_09285 -1.7 -7.6 reactive intermediate/imine deaminase compare
AO353_01990 -1.7 -5.9 UDP-N-acetylglucosamine 2-epimerase compare
AO353_08350 -1.7 -6.1 hypothetical protein compare
AO353_09320 -1.7 -7.6 ATP-dependent DNA helicase RecG compare
AO353_17885 -1.7 -1.0 hypothetical protein compare
AO353_10170 -1.6 -6.7 fatty acid methyltransferase compare
AO353_09135 -1.6 -1.1 cytochrome C compare
AO353_14495 -1.6 -4.1 acetolactate synthase 3 catalytic subunit compare
AO353_20370 -1.6 -2.9 MerR family transcriptional regulator compare
AO353_02685 -1.6 -2.8 phosphoribosylglycinamide formyltransferase compare
AO353_24260 -1.6 -1.2 hypothetical protein compare
AO353_05325 -1.6 -4.6 GntR family transcriptional regulator compare
AO353_25475 -1.6 -4.5 multidrug resistance protein compare
AO353_27735 -1.6 -6.2 isocitrate lyase compare
AO353_24405 -1.6 -2.6 ArsR family transcriptional regulator compare
AO353_08015 -1.6 -3.8 5,10-methylenetetrahydrofolate reductase compare
AO353_10510 -1.6 -1.5 benzoate transporter compare
AO353_06400 -1.6 -4.2 hypothetical protein compare
AO353_02060 -1.6 -2.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
AO353_14150 -1.6 -1.8 peptidylprolyl isomerase compare
AO353_08600 -1.6 -2.8 TetR family transcriptional regulator compare
AO353_17675 -1.6 -4.0 hypothetical protein compare
AO353_03210 -1.6 -2.6 GNAT family acetyltransferase compare
AO353_14940 -1.6 -1.8 malate:quinone oxidoreductase compare
AO353_09235 -1.6 -4.9 phosphoglucomutase compare
AO353_22010 -1.6 -3.5 hypothetical protein compare
AO353_00610 -1.6 -1.0 cytochrome C oxidase Cbb3 compare
AO353_00260 -1.6 -2.1 hypothetical protein compare
AO353_06750 -1.5 -3.9 methionine ABC transporter ATP-binding protein compare
AO353_03295 -1.5 -8.4 ribonuclease BN compare
AO353_23950 -1.5 -2.6 hypothetical protein compare
AO353_22390 -1.5 -5.2 aldehyde dehydrogenase compare
AO353_04365 -1.5 -3.6 recombinase XerD compare
AO353_11305 -1.5 -3.5 adenylylsulfate kinase compare
AO353_28110 -1.5 -4.6 TetR family transcriptional regulator compare
AO353_28295 -1.5 -2.3 GNAT family acetyltransferase compare
AO353_18510 -1.5 -2.7 hypothetical protein compare
AO353_06405 -1.5 -3.5 hypothetical protein compare
AO353_16835 -1.5 -1.2 LuxR family transcriptional regulator compare
AO353_00875 -1.4 -6.0 transcriptional regulator compare
AO353_21530 -1.4 -2.5 type VI secretion protein compare
AO353_19015 -1.4 -8.0 hypothetical protein compare
AO353_20185 -1.4 -3.5 DNA-binding protein compare
AO353_11165 -1.4 -6.4 hypothetical protein compare
AO353_20140 -1.4 -2.6 hypothetical protein compare
AO353_18830 -1.4 -3.3 chemotaxis protein CheW compare
AO353_22930 -1.4 -2.2 hypothetical protein compare
AO353_03195 -1.4 -3.1 transcriptional regulator compare
AO353_27985 -1.4 -2.0 peptidase M14 compare
AO353_27410 -1.3 -2.3 hypothetical protein compare
AO353_03100 -1.3 -1.8 XRE family transcriptional regulator compare
AO353_17945 -1.3 -1.9 cyclic nucleotide-binding protein compare
AO353_16710 -1.3 -1.7 hypothetical protein compare
AO353_28155 -1.3 -3.1 LysR family transcriptional regulator compare
AO353_12080 -1.3 -2.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
AO353_08265 -1.3 -2.9 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
AO353_20340 -1.3 -2.4 gamma-carboxygeranoyl-CoA hydratase compare
AO353_10440 -1.3 -2.8 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG compare
AO353_22350 -1.3 -3.6 LuxR family transcriptional regulator compare
AO353_03020 -1.3 -4.9 arginine N-succinyltransferase compare
AO353_22420 -1.3 -2.9 histidine kinase compare
AO353_14935 -1.3 -2.3 aminopeptidase compare
AO353_02250 -1.3 -1.9 chorismate synthase compare


Specific Phenotypes

For 12 genes in this experiment

For carbon source L-Citrulline in Pseudomonas fluorescens FW300-N2E3

For carbon source L-Citrulline across organisms