Experiment set15IT094 for Sinorhizobium meliloti 1021

Compare to:

R2A control

200 most important genes:

  gene name fitness t score description  
SMc02245 -4.2 -4.8 dihydroorotate dehydrogenase 2 compare
SMc00412 -4.0 -3.9 orotidine 5'-phosphate decarboxylase compare
SMc02166 -3.7 -10.0 dihydroorotase compare
SMc00963 -3.7 -4.1 hypothetical protein compare
SMc00017 -3.6 -1.7 homoserine kinase compare
SMc01360 -3.6 -2.4 aspartate carbamoyltransferase catalytic subunit compare
SMc02165 -3.5 -6.7 orotate phosphoribosyltransferase compare
SMc02246 -3.5 -1.2 hypothetical protein compare
SMc00815 -3.2 -2.0 inosine 5'-monophosphate dehydrogenase compare
SMc03763 -3.2 -2.2 cytosine-specific methyltransferase compare
SMc01800 -3.1 -1.5 cytochrome C oxidase assembly transmembrane protein compare
SMc03229 -3.0 -2.4 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc04001 -2.9 -2.0 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc00614 -2.9 -8.3 phosphoribosylglycinamide formyltransferase compare
SMc04088 -2.8 -12.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc00494 -2.7 -2.8 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc02144 -2.7 -3.9 phosphate ABC transporter permease compare
SMc01361 -2.7 -3.6 dihydroorotase compare
SMc00993 -2.7 -10.1 phosphoribosylamine--glycine ligase compare
SMc00236 -2.6 -5.3 Indole-3-glycerol phosphate synthase compare
SMc01880 -2.6 -2.5 pantoate--beta-alanine ligase compare
SMc01124 -2.6 -7.9 PII uridylyl-transferase compare
SMc04005 -2.5 -10.4 pyruvate kinase compare
SMc00493 -2.4 -5.8 phosphoribosylformylglycinamidine synthase I compare
SMc00554 -2.4 -8.8 amidophosphoribosyltransferase compare
SMc02766 -2.4 -14.3 tryptophan synthase subunit beta compare
SM_b21177 -2.3 -8.3 phosphate uptake ABC transporter ATP-binding protein compare
SMc02145 -2.3 -1.1 signal peptide protein compare
SMc02753 -2.3 -1.6 PTS system transporter subunit IIA compare
SMc02765 -2.3 -14.4 tryptophan synthase subunit alpha compare
SMc02833 -2.2 -2.3 penicillin-insensitive murein endopeptidase compare
SMc00488 -2.2 -13.5 phosphoribosylformylglycinamidine synthase II compare
SMc02755 -2.1 -5.5 S-adenosyl-L-homocysteine hydrolase compare
SMc02569 -2.1 -4.3 imidazole glycerol phosphate synthase subunit HisF compare
SMc00615 -2.1 -7.0 phosphoribosylaminoimidazole synthetase compare
SMc03935 -2.1 -10.2 hypothetical protein compare
SMc00918 -2.1 -10.0 ATP phosphoribosyltransferase regulatory subunit compare
SMc02725 -2.1 -12.1 anthranilate synthase compare
SMc00419 -2.0 -4.7 glutathione synthetase compare
SMa1635 -1.9 -2.1 hypothetical protein compare
SM_b21174 -1.9 -3.4 phosphate uptake ABC transporter permease compare
SMc00495 -1.9 -3.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc00917 -1.9 -4.8 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc04052 -1.9 -1.8 transcriptional regulator compare
SMc00293 -1.9 -7.4 homoserine dehydrogenase compare
SMc03850 -1.9 -0.8 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc03967 -1.8 -1.5 Holliday junction resolvase compare
SMc02140 -1.8 -1.2 phosphate regulon transcriptional regulatory protein compare
SMc03100 -1.8 -1.9 hypothetical protein compare
SMc02767 -1.7 -9.1 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc00492 -1.7 -1.0 hypothetical protein compare
SMc02147 -1.6 -4.6 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc01447 -1.6 -1.6 hypothetical protein compare
SM_b21175 -1.6 -2.8 phosphate uptake ABC transporter permease compare
SM_b21176 -1.6 -3.7 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc04002 -1.6 -6.5 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMa1002 -1.5 -2.1 hypothetical protein compare
SMc03140 -1.5 -4.1 transcriptional regulator compare
SMc02435 -1.5 -2.1 methyltransferase compare
SMc02570 -1.5 -6.7 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc01881 -1.5 -2.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc00235 -1.5 -8.6 anthranilate phosphoribosyltransferase compare
SMa0789 -1.5 -3.3 GntR family transcriptional regulator compare
SMc01004 -1.5 -5.9 phosphoribosyl-AMP cyclohydrolase compare
SMc02142 -1.4 -3.4 phosphate transporter ATP-binding protein compare
SMc04296 -1.4 -1.0 cell division protein FtsZ compare
SMc02232 -1.4 -2.3 hypothetical protein compare
SMc00353 -1.4 -2.4 transmembrane protein compare
SMc02425 -1.4 -2.2 transcriptional regulator compare
SMc03849 -1.4 -0.8 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc05020 -1.4 -2.0 entericidin A precursor compare
SMa2215 -1.4 -2.7 GntR family transcriptional regulator compare
SMc03070 -1.3 -5.8 glucose-6-phosphate 1-dehydrogenase compare
SMc00088 -1.3 -1.4 hypothetical protein compare
SM_b20701 -1.3 -1.3 hypothetical protein compare
SMc03900 -1.3 -8.9 cyclic beta-1,2-glucan ABc transporter compare
SMc00982 -1.3 -4.6 dioxygenase compare
SMc01595 -1.2 -2.5 sensor histidine kinase transmembrane protein compare
SMc03008 -1.2 -1.2 chemotaxis protein compare
SMc02867 -1.2 -2.9 multidrug-efflux system transmembrane protein compare
SMa0753 -1.2 -0.7 hypothetical protein compare
SMc03978 -1.2 -2.2 transketolase compare
SMc01206 -1.1 -1.0 queuine tRNA-ribosyltransferase compare
SMc04092 -1.1 -1.2 hypothetical protein compare
SMc02572 -1.1 -3.2 imidazole glycerol phosphate synthase subunit HisH compare
SMc00041 -1.1 -2.4 hypothetical protein compare
SMc03046 -1.1 -3.1 transcriptional regulator compare
SMc02561 -1.1 -2.1 hypothetical protein compare
SMc02143 -1.1 -2.6 phosphate ABC transporter permease compare
SMa0349 -1.1 -1.5 hypothetical protein compare
SMc01569 -1.1 -0.5 carbamoyl phosphate synthase small subunit compare
SMc02141 -1.0 -3.1 phosphate transporter PhoU compare
SM_b21633 -1.0 -1.1 enoyl-CoA hydratase compare
SMc03159 -1.0 -2.2 ABC transporter ATP-binding protein compare
SMc04085 -1.0 -3.7 hypothetical protein compare
SMc01089 -1.0 -1.3 hypothetical protein compare
SMc02520 -1.0 -5.2 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SM_b20452 -1.0 -2.1 hypothetical protein compare
SMa1894 -1.0 -1.5 methionine sulfoxide reductase B compare
SMc02307 -1.0 -4.3 histidinol dehydrogenase compare
SMc00981 -0.9 -4.0 ferredoxin protein compare
SMc01850 -0.9 -1.6 hypothetical protein compare
SMc04382 -0.9 -8.7 beta-(1,2)-glucan production associated transmembrane protein compare
SMc00361 -0.9 -2.3 hypothetical protein compare
SMc01726 -0.9 -3.2 acetylglutamate kinase compare
SMc01933 -0.9 -1.0 hypothetical protein compare
SMc01454 -0.9 -6.0 hypothetical protein compare
SMc00414 -0.9 -6.3 hypothetical protein compare
SMc03127 -0.9 -1.4 ABC transporter permease compare
SMc01578 -0.9 -5.1 aspartate aminotransferase compare
SMc00513 -0.9 -2.8 amino acid-binding periplasmic protein compare
SMc03979 -0.9 -1.8 glyceraldehyde-3-phosphate dehydrogenase compare
SMc00667 -0.9 -1.6 hypothetical protein compare
SM_b20387 -0.9 -1.0 transcriptional regulator compare
SMc02137 -0.9 -2.3 ornithine carbamoyltransferase compare
SM_b20746 -0.9 -0.7 hypothetical protein compare
SMc03158 -0.9 -1.5 ABC transporter permease compare
SMa5010 -0.9 -0.9 hypothetical protein compare
SMc04213 -0.9 -1.6 diacylglycerol kinase compare
SM_b20105 -0.9 -1.1 transcriptional regulator compare
SMa0848 -0.9 -1.9 hypothetical protein compare
SMc01770 -0.9 -1.0 serine hydroxymethyltransferase compare
SMc02362 -0.9 -1.1 cytochrome c-type biogenesis protein CcmE compare
SMc04003 -0.8 -1.4 50S ribosomal protein L36 compare
SMc04327 -0.8 -0.8 hypothetical protein compare
SMc03069 -0.8 -1.7 6-phosphogluconolactonase compare
SMc04298 -0.8 -1.6 hypothetical protein compare
SMa1007 -0.8 -1.5 copper protein compare
SMc00588 -0.8 -1.3 L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data) compare
SM_b21482 -0.8 -1.0 hypothetical protein compare
SM_b20624 -0.8 -3.5 methylthioribose-1-phosphate isomerase compare
SMc02659 -0.8 -2.5 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc01991 -0.8 -1.3 short chain dehydrogenase compare
SMc02983 -0.8 -3.1 ornithine, DAP, or arginine decarboxylase compare
SMc00351 -0.8 -1.0 hypothetical protein compare
SM_b20258 -0.8 -1.3 transcriptional regulator compare
SMc02280 -0.8 -1.2 hypothetical protein compare
SMa0861 -0.8 -2.1 transposase, fragment compare
SMc02838 -0.8 -2.2 phosphoglyceromutase compare
SMc00458 -0.8 -6.2 transcriptional regulator compare
SMa0326 -0.8 -1.6 short chain alcohol dehydrogenase-related dehydrogenase compare
SMa0933 -0.8 -1.4 TraC conjugal transfer protein compare
SMc01215 -0.8 -0.5 carbamoyl phosphate synthase large subunit compare
SM_b20026 -0.8 -1.3 hypothetical protein compare
SMc00585 -0.8 -4.6 leucyl aminopeptidase compare
SMc01147 -0.8 -1.4 coproporphyrinogen III oxidase compare
SMc02909 -0.8 -1.1 transglycosylase transmembrane protein compare
SMc01028 -0.8 -5.4 phosphopyruvate hydratase compare
SMc01568 -0.8 -0.9 hypothetical protein compare
SM_b20209 -0.8 -2.7 hypothetical protein compare
SMc00053 -0.7 -0.6 monovalent cation/H+ antiporter subunit C compare
SMc01440 -0.7 -3.5 hydrolase serine protease transmembrane protein compare
SMc01441 -0.7 -2.7 membrane bound protease compare
SMc01187 -0.7 -0.9 rare lipoprotein A compare
SMa0759 -0.7 -2.1 hypothetical protein compare
SMc02574 -0.7 -2.4 imidazoleglycerol-phosphate dehydratase compare
SMc00013 -0.7 -0.6 cytochrome C oxidase subunit III transmembrane protein compare
SMc02683 -0.7 -1.2 hypothetical protein compare
SMc00576 -0.7 -1.6 hypothetical protein compare
SM_b20955 -0.7 -1.7 endo-beta-1,3-1,4-glycanase compare
SMa5023 -0.7 -1.4 hypothetical protein compare
SM_b21641 -0.7 -3.1 ArsR family transcriptional regulator compare
SM_b20086 -0.7 -1.2 hypothetical protein compare
SMc00914 -0.7 -1.9 oxidoreductase compare
SM_b22023 -0.7 -1.3 molecular chaperone GroES compare
SMc02115 -0.7 -0.6 hypothetical protein compare
SM_b20547 -0.7 -1.3 hypothetical protein compare
SMc02114 -0.7 -1.7 hypothetical protein compare
SMc04000 -0.7 -0.8 hypothetical protein compare
SMa1073 -0.7 -1.1 TRm23b IS ATP-binding protein compare
SMc00466 -0.7 -2.7 hypothetical protein compare
SMa0093 -0.7 -1.3 Branched-chain amino acid aminotransferase compare
SM_b21677 -0.7 -1.1 signal peptide compare
SMc01853 -0.7 -2.4 hypothetical protein compare
SMa5033 -0.7 -0.7 hypothetical protein compare
SMc02112 -0.7 -3.7 hypothetical protein compare
SMc02868 -0.7 -2.1 multidrug efflux system protein compare
SMc02835 -0.7 -3.5 glucokinase compare
SM_b21125 -0.7 -3.4 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) (from data) compare
SMc02758 -0.7 -2.2 nucleotidyl transferase compare
SMc00579 -0.7 -1.8 dimethyladenosine transferase compare
SMc00619 -0.7 -0.6 hypothetical protein compare
SMc02234 -0.7 -1.3 hypothetical protein compare
SM_b20474 -0.7 -1.0 hypothetical protein compare
SMa0657 -0.6 -2.0 cytochrome c binding protein, amino terminus compare
SM_b20261 -0.6 -3.3 malate dehydrogenase compare
SMc01769 -0.6 -5.2 hypothetical protein compare
SMa0223 -0.6 -3.3 TetR family transcriptional regulator compare
SM_b20128 -0.6 -2.1 deaminase compare
SMa1092 -0.6 -1.6 hypothetical protein compare
SMc00877 -0.6 -4.4 transcriptional regulator compare
SMc01448 -0.6 -2.5 hypothetical protein compare
SMa1585 -0.6 -2.1 hypothetical protein compare
SMc02850 -0.6 -1.5 DNA polymerase I compare
SMc02544 -0.6 -0.7 hypothetical protein compare
SM_b21222 -0.6 -3.0 transcriptional regulator compare
SMc01342 -0.6 -2.3 hypothetical protein compare
SM_b20392 -0.6 -2.3 transcriptional regulator NanR compare
SMc03834 -0.6 -0.9 pterin-4-alpha-carbinolamine dehydratase compare
SM_b21163 -0.6 -4.1 Urocanate hydratase (EC 4.2.1.49) (from data) compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in r2a control experiments