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Experiment set15IT094 for
Sinorhizobium meliloti 1021
Compare to:
Go
R2A control
200 most important genes:
gene
name
fitness
t score
description
SMc02245
-4.2
-4.8
dihydroorotate dehydrogenase 2
compare
SMc00412
-4.0
-3.9
orotidine 5'-phosphate decarboxylase
compare
SMc02166
-3.7
-10.0
dihydroorotase
compare
SMc00963
-3.7
-4.1
hypothetical protein
compare
SMc00017
-3.6
-1.7
homoserine kinase
compare
SMc01360
-3.6
-2.4
aspartate carbamoyltransferase catalytic subunit
compare
SMc02165
-3.5
-6.7
orotate phosphoribosyltransferase
compare
SMc02246
-3.5
-1.2
hypothetical protein
compare
SMc00815
-3.2
-2.0
inosine 5'-monophosphate dehydrogenase
compare
SMc03763
-3.2
-2.2
cytosine-specific methyltransferase
compare
SMc01800
-3.1
-1.5
cytochrome C oxidase assembly transmembrane protein
compare
SMc03229
-3.0
-2.4
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
compare
SMc04001
-2.9
-2.0
phosphoribosylaminoimidazole carboxylase catalytic subunit protein
compare
SMc00614
-2.9
-8.3
phosphoribosylglycinamide formyltransferase
compare
SMc04088
-2.8
-12.0
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
compare
SMc00494
-2.7
-2.8
phosphoribosylformylglycinamidine synthase subunit PurS
compare
SMc02144
-2.7
-3.9
phosphate ABC transporter permease
compare
SMc01361
-2.7
-3.6
dihydroorotase
compare
SMc00993
-2.7
-10.1
phosphoribosylamine--glycine ligase
compare
SMc00236
-2.6
-5.3
Indole-3-glycerol phosphate synthase
compare
SMc01880
-2.6
-2.5
pantoate--beta-alanine ligase
compare
SMc01124
-2.6
-7.9
PII uridylyl-transferase
compare
SMc04005
-2.5
-10.4
pyruvate kinase
compare
SMc00493
-2.4
-5.8
phosphoribosylformylglycinamidine synthase I
compare
SMc00554
-2.4
-8.8
amidophosphoribosyltransferase
compare
SMc02766
-2.4
-14.3
tryptophan synthase subunit beta
compare
SM
_b21177
-2.3
-8.3
phosphate uptake ABC transporter ATP-binding protein
compare
SMc02145
-2.3
-1.1
signal peptide protein
compare
SMc02753
-2.3
-1.6
PTS system transporter subunit IIA
compare
SMc02765
-2.3
-14.4
tryptophan synthase subunit alpha
compare
SMc02833
-2.2
-2.3
penicillin-insensitive murein endopeptidase
compare
SMc00488
-2.2
-13.5
phosphoribosylformylglycinamidine synthase II
compare
SMc02755
-2.1
-5.5
S-adenosyl-L-homocysteine hydrolase
compare
SMc02569
-2.1
-4.3
imidazole glycerol phosphate synthase subunit HisF
compare
SMc00615
-2.1
-7.0
phosphoribosylaminoimidazole synthetase
compare
SMc03935
-2.1
-10.2
hypothetical protein
compare
SMc00918
-2.1
-10.0
ATP phosphoribosyltransferase regulatory subunit
compare
SMc02725
-2.1
-12.1
anthranilate synthase
compare
SMc00419
-2.0
-4.7
glutathione synthetase
compare
SMa1635
-1.9
-2.1
hypothetical protein
compare
SM
_b21174
-1.9
-3.4
phosphate uptake ABC transporter permease
compare
SMc00495
-1.9
-3.4
phosphoribosylaminoimidazolesuccinocarboxamide synthase
compare
SMc00917
-1.9
-4.8
ATP phosphoribosyltransferase (EC 2.4.2.17)
(from data)
compare
SMc04052
-1.9
-1.8
transcriptional regulator
compare
SMc00293
-1.9
-7.4
homoserine dehydrogenase
compare
SMc03850
-1.9
-0.8
heme exporter D (cytochrome C-type biogenesis protein) transmembrane
compare
SMc03967
-1.8
-1.5
Holliday junction resolvase
compare
SMc02140
-1.8
-1.2
phosphate regulon transcriptional regulatory protein
compare
SMc03100
-1.8
-1.9
hypothetical protein
compare
SMc02767
-1.7
-9.1
N-(5'-phosphoribosyl)anthranilate isomerase
compare
SMc00492
-1.7
-1.0
hypothetical protein
compare
SMc02147
-1.6
-4.6
phosphate regulon sensor histidine kinase transmembrane protein
compare
SMc01447
-1.6
-1.6
hypothetical protein
compare
SM
_b21175
-1.6
-2.8
phosphate uptake ABC transporter permease
compare
SM
_b21176
-1.6
-3.7
phosphate uptake ABC transporter substrate-binding protein precursor
compare
SMc04002
-1.6
-6.5
phosphoribosylaminoimidazole carboxylase ATPase subunit
compare
SMa1002
-1.5
-2.1
hypothetical protein
compare
SMc03140
-1.5
-4.1
transcriptional regulator
compare
SMc02435
-1.5
-2.1
methyltransferase
compare
SMc02570
-1.5
-6.7
1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16)
(from data)
compare
SMc01881
-1.5
-2.5
3-methyl-2-oxobutanoate hydroxymethyltransferase
compare
SMc00235
-1.5
-8.6
anthranilate phosphoribosyltransferase
compare
SMa0789
-1.5
-3.3
GntR family transcriptional regulator
compare
SMc01004
-1.5
-5.9
phosphoribosyl-AMP cyclohydrolase
compare
SMc02142
-1.4
-3.4
phosphate transporter ATP-binding protein
compare
SMc04296
-1.4
-1.0
cell division protein FtsZ
compare
SMc02232
-1.4
-2.3
hypothetical protein
compare
SMc00353
-1.4
-2.4
transmembrane protein
compare
SMc02425
-1.4
-2.2
transcriptional regulator
compare
SMc03849
-1.4
-0.8
heme exporter C (cytochrome C-type biogenesis protein) transmembrane
compare
SMc05020
-1.4
-2.0
entericidin A precursor
compare
SMa2215
-1.4
-2.7
GntR family transcriptional regulator
compare
SMc03070
-1.3
-5.8
glucose-6-phosphate 1-dehydrogenase
compare
SMc00088
-1.3
-1.4
hypothetical protein
compare
SM
_b20701
-1.3
-1.3
hypothetical protein
compare
SMc03900
-1.3
-8.9
cyclic beta-1,2-glucan ABc transporter
compare
SMc00982
-1.3
-4.6
dioxygenase
compare
SMc01595
-1.2
-2.5
sensor histidine kinase transmembrane protein
compare
SMc03008
-1.2
-1.2
chemotaxis protein
compare
SMc02867
-1.2
-2.9
multidrug-efflux system transmembrane protein
compare
SMa0753
-1.2
-0.7
hypothetical protein
compare
SMc03978
-1.2
-2.2
transketolase
compare
SMc01206
-1.1
-1.0
queuine tRNA-ribosyltransferase
compare
SMc04092
-1.1
-1.2
hypothetical protein
compare
SMc02572
-1.1
-3.2
imidazole glycerol phosphate synthase subunit HisH
compare
SMc00041
-1.1
-2.4
hypothetical protein
compare
SMc03046
-1.1
-3.1
transcriptional regulator
compare
SMc02561
-1.1
-2.1
hypothetical protein
compare
SMc02143
-1.1
-2.6
phosphate ABC transporter permease
compare
SMa0349
-1.1
-1.5
hypothetical protein
compare
SMc01569
-1.1
-0.5
carbamoyl phosphate synthase small subunit
compare
SMc02141
-1.0
-3.1
phosphate transporter PhoU
compare
SM
_b21633
-1.0
-1.1
enoyl-CoA hydratase
compare
SMc03159
-1.0
-2.2
ABC transporter ATP-binding protein
compare
SMc04085
-1.0
-3.7
hypothetical protein
compare
SMc01089
-1.0
-1.3
hypothetical protein
compare
SMc02520
-1.0
-5.2
glycerol-3-phosphate dehydrogenase (EC 1.1.5.3)
(from data)
compare
SM
_b20452
-1.0
-2.1
hypothetical protein
compare
SMa1894
-1.0
-1.5
methionine sulfoxide reductase B
compare
SMc02307
-1.0
-4.3
histidinol dehydrogenase
compare
SMc00981
-0.9
-4.0
ferredoxin protein
compare
SMc01850
-0.9
-1.6
hypothetical protein
compare
SMc04382
-0.9
-8.7
beta-(1,2)-glucan production associated transmembrane protein
compare
SMc00361
-0.9
-2.3
hypothetical protein
compare
SMc01726
-0.9
-3.2
acetylglutamate kinase
compare
SMc01933
-0.9
-1.0
hypothetical protein
compare
SMc01454
-0.9
-6.0
hypothetical protein
compare
SMc00414
-0.9
-6.3
hypothetical protein
compare
SMc03127
-0.9
-1.4
ABC transporter permease
compare
SMc01578
-0.9
-5.1
aspartate aminotransferase
compare
SMc00513
-0.9
-2.8
amino acid-binding periplasmic protein
compare
SMc03979
-0.9
-1.8
glyceraldehyde-3-phosphate dehydrogenase
compare
SMc00667
-0.9
-1.6
hypothetical protein
compare
SM
_b20387
-0.9
-1.0
transcriptional regulator
compare
SMc02137
-0.9
-2.3
ornithine carbamoyltransferase
compare
SM
_b20746
-0.9
-0.7
hypothetical protein
compare
SMc03158
-0.9
-1.5
ABC transporter permease
compare
SMa5010
-0.9
-0.9
hypothetical protein
compare
SMc04213
-0.9
-1.6
diacylglycerol kinase
compare
SM
_b20105
-0.9
-1.1
transcriptional regulator
compare
SMa0848
-0.9
-1.9
hypothetical protein
compare
SMc01770
-0.9
-1.0
serine hydroxymethyltransferase
compare
SMc02362
-0.9
-1.1
cytochrome c-type biogenesis protein CcmE
compare
SMc04003
-0.8
-1.4
50S ribosomal protein L36
compare
SMc04327
-0.8
-0.8
hypothetical protein
compare
SMc03069
-0.8
-1.7
6-phosphogluconolactonase
compare
SMc04298
-0.8
-1.6
hypothetical protein
compare
SMa1007
-0.8
-1.5
copper protein
compare
SMc00588
-0.8
-1.3
L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48)
(from data)
compare
SM
_b21482
-0.8
-1.0
hypothetical protein
compare
SM
_b20624
-0.8
-3.5
methylthioribose-1-phosphate isomerase
compare
SMc02659
-0.8
-2.5
GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein
compare
SMc01991
-0.8
-1.3
short chain dehydrogenase
compare
SMc02983
-0.8
-3.1
ornithine, DAP, or arginine decarboxylase
compare
SMc00351
-0.8
-1.0
hypothetical protein
compare
SM
_b20258
-0.8
-1.3
transcriptional regulator
compare
SMc02280
-0.8
-1.2
hypothetical protein
compare
SMa0861
-0.8
-2.1
transposase, fragment
compare
SMc02838
-0.8
-2.2
phosphoglyceromutase
compare
SMc00458
-0.8
-6.2
transcriptional regulator
compare
SMa0326
-0.8
-1.6
short chain alcohol dehydrogenase-related dehydrogenase
compare
SMa0933
-0.8
-1.4
TraC conjugal transfer protein
compare
SMc01215
-0.8
-0.5
carbamoyl phosphate synthase large subunit
compare
SM
_b20026
-0.8
-1.3
hypothetical protein
compare
SMc00585
-0.8
-4.6
leucyl aminopeptidase
compare
SMc01147
-0.8
-1.4
coproporphyrinogen III oxidase
compare
SMc02909
-0.8
-1.1
transglycosylase transmembrane protein
compare
SMc01028
-0.8
-5.4
phosphopyruvate hydratase
compare
SMc01568
-0.8
-0.9
hypothetical protein
compare
SM
_b20209
-0.8
-2.7
hypothetical protein
compare
SMc00053
-0.7
-0.6
monovalent cation/H+ antiporter subunit C
compare
SMc01440
-0.7
-3.5
hydrolase serine protease transmembrane protein
compare
SMc01441
-0.7
-2.7
membrane bound protease
compare
SMc01187
-0.7
-0.9
rare lipoprotein A
compare
SMa0759
-0.7
-2.1
hypothetical protein
compare
SMc02574
-0.7
-2.4
imidazoleglycerol-phosphate dehydratase
compare
SMc00013
-0.7
-0.6
cytochrome C oxidase subunit III transmembrane protein
compare
SMc02683
-0.7
-1.2
hypothetical protein
compare
SMc00576
-0.7
-1.6
hypothetical protein
compare
SM
_b20955
-0.7
-1.7
endo-beta-1,3-1,4-glycanase
compare
SMa5023
-0.7
-1.4
hypothetical protein
compare
SM
_b21641
-0.7
-3.1
ArsR family transcriptional regulator
compare
SM
_b20086
-0.7
-1.2
hypothetical protein
compare
SMc00914
-0.7
-1.9
oxidoreductase
compare
SM
_b22023
-0.7
-1.3
molecular chaperone GroES
compare
SMc02115
-0.7
-0.6
hypothetical protein
compare
SM
_b20547
-0.7
-1.3
hypothetical protein
compare
SMc02114
-0.7
-1.7
hypothetical protein
compare
SMc04000
-0.7
-0.8
hypothetical protein
compare
SMa1073
-0.7
-1.1
TRm23b IS ATP-binding protein
compare
SMc00466
-0.7
-2.7
hypothetical protein
compare
SMa0093
-0.7
-1.3
Branched-chain amino acid aminotransferase
compare
SM
_b21677
-0.7
-1.1
signal peptide
compare
SMc01853
-0.7
-2.4
hypothetical protein
compare
SMa5033
-0.7
-0.7
hypothetical protein
compare
SMc02112
-0.7
-3.7
hypothetical protein
compare
SMc02868
-0.7
-2.1
multidrug efflux system protein
compare
SMc02835
-0.7
-3.5
glucokinase
compare
SM
_b21125
-0.7
-3.4
Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
(from data)
compare
SMc02758
-0.7
-2.2
nucleotidyl transferase
compare
SMc00579
-0.7
-1.8
dimethyladenosine transferase
compare
SMc00619
-0.7
-0.6
hypothetical protein
compare
SMc02234
-0.7
-1.3
hypothetical protein
compare
SM
_b20474
-0.7
-1.0
hypothetical protein
compare
SMa0657
-0.6
-2.0
cytochrome c binding protein, amino terminus
compare
SM
_b20261
-0.6
-3.3
malate dehydrogenase
compare
SMc01769
-0.6
-5.2
hypothetical protein
compare
SMa0223
-0.6
-3.3
TetR family transcriptional regulator
compare
SM
_b20128
-0.6
-2.1
deaminase
compare
SMa1092
-0.6
-1.6
hypothetical protein
compare
SMc00877
-0.6
-4.4
transcriptional regulator
compare
SMc01448
-0.6
-2.5
hypothetical protein
compare
SMa1585
-0.6
-2.1
hypothetical protein
compare
SMc02850
-0.6
-1.5
DNA polymerase I
compare
SMc02544
-0.6
-0.7
hypothetical protein
compare
SM
_b21222
-0.6
-3.0
transcriptional regulator
compare
SMc01342
-0.6
-2.3
hypothetical protein
compare
SM
_b20392
-0.6
-2.3
transcriptional regulator NanR
compare
SMc03834
-0.6
-0.9
pterin-4-alpha-carbinolamine dehydratase
compare
SM
_b21163
-0.6
-4.1
Urocanate hydratase (EC 4.2.1.49)
(from data)
compare
Specific Phenotypes
None in this experiment
For Sinorhizobium meliloti 1021 in r2a control experiments