Experiment set15IT093 for Sinorhizobium meliloti 1021

Compare to:

R2A control

200 most important genes:

  gene name fitness t score description  
SMc02245 -5.2 -5.0 dihydroorotate dehydrogenase 2 compare
SMc00412 -3.8 -4.5 orotidine 5'-phosphate decarboxylase compare
SMc01360 -3.6 -2.5 aspartate carbamoyltransferase catalytic subunit compare
SMc00017 -3.6 -1.7 homoserine kinase compare
SMc02246 -3.5 -1.3 hypothetical protein compare
SMc04005 -3.3 -9.7 pyruvate kinase compare
SMc01361 -3.2 -3.1 dihydroorotase compare
SMa1639 -3.2 -1.5 hypothetical protein compare
SMc00963 -3.1 -4.5 hypothetical protein compare
SMc02166 -2.9 -8.3 dihydroorotase compare
SMc02165 -2.8 -6.8 orotate phosphoribosyltransferase compare
SMc00815 -2.8 -1.7 inosine 5'-monophosphate dehydrogenase compare
SMc03763 -2.7 -3.1 cytosine-specific methyltransferase compare
SMc04001 -2.6 -2.1 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc00295 -2.6 -1.3 hypothetical protein compare
SMc01153 -2.5 -1.7 enoyl-CoA hydratase compare
SMc04088 -2.4 -12.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc00993 -2.4 -10.1 phosphoribosylamine--glycine ligase compare
SMc00554 -2.4 -9.0 amidophosphoribosyltransferase compare
SMc02145 -2.3 -1.1 signal peptide protein compare
SMc00236 -2.3 -6.0 Indole-3-glycerol phosphate synthase compare
SMc03935 -2.2 -11.6 hypothetical protein compare
SMc00614 -2.2 -8.3 phosphoribosylglycinamide formyltransferase compare
SMc02147 -2.2 -4.5 phosphate regulon sensor histidine kinase transmembrane protein compare
SMc02766 -2.2 -13.1 tryptophan synthase subunit beta compare
SMc00494 -2.2 -2.8 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc00235 -2.1 -10.5 anthranilate phosphoribosyltransferase compare
SMc02765 -2.1 -14.5 tryptophan synthase subunit alpha compare
SMc02142 -2.1 -4.3 phosphate transporter ATP-binding protein compare
SM_b21177 -2.1 -8.0 phosphate uptake ABC transporter ATP-binding protein compare
SMc02767 -2.0 -10.5 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc00495 -2.0 -5.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc02725 -2.0 -10.9 anthranilate synthase compare
SMc00293 -2.0 -7.2 homoserine dehydrogenase compare
SMc01881 -2.0 -3.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02144 -1.9 -3.9 phosphate ABC transporter permease compare
SMc00488 -1.9 -13.1 phosphoribosylformylglycinamidine synthase II compare
SMc00493 -1.9 -4.7 phosphoribosylformylglycinamidine synthase I compare
SMc01124 -1.9 -6.5 PII uridylyl-transferase compare
SMc00615 -1.9 -6.7 phosphoribosylaminoimidazole synthetase compare
SMa1635 -1.9 -2.2 hypothetical protein compare
SMc01880 -1.9 -2.7 pantoate--beta-alanine ligase compare
SMa1365 -1.8 -1.1 ATP-binding protein compare
SM_b21174 -1.8 -5.0 phosphate uptake ABC transporter permease compare
SMc01770 -1.8 -2.8 serine hydroxymethyltransferase compare
SM_b21175 -1.8 -2.9 phosphate uptake ABC transporter permease compare
SMc03070 -1.8 -7.4 glucose-6-phosphate 1-dehydrogenase compare
SMc02572 -1.8 -4.4 imidazole glycerol phosphate synthase subunit HisH compare
SMc02232 -1.8 -2.6 hypothetical protein compare
SMc00917 -1.7 -4.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc02137 -1.7 -3.2 ornithine carbamoyltransferase compare
SMa5033 -1.7 -1.4 hypothetical protein compare
SMc00918 -1.7 -8.6 ATP phosphoribosyltransferase regulatory subunit compare
SMc03978 -1.7 -2.8 transketolase compare
SMc02755 -1.7 -5.6 S-adenosyl-L-homocysteine hydrolase compare
SMc01004 -1.6 -8.3 phosphoribosyl-AMP cyclohydrolase compare
SMc03100 -1.6 -1.5 hypothetical protein compare
SMc02055 -1.5 -1.8 phytoene synthase compare
SMc00856 -1.5 -1.2 hypothetical protein compare
SMc02141 -1.5 -4.1 phosphate transporter PhoU compare
SM_b21176 -1.5 -4.2 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc01595 -1.5 -4.3 sensor histidine kinase transmembrane protein compare
SMc03849 -1.4 -0.8 heme exporter C (cytochrome C-type biogenesis protein) transmembrane compare
SMc02983 -1.4 -5.3 ornithine, DAP, or arginine decarboxylase compare
SMc00981 -1.4 -4.3 ferredoxin protein compare
SMc02978 -1.4 -4.6 hypothetical protein compare
SMc00053 -1.4 -1.1 monovalent cation/H+ antiporter subunit C compare
SMc03051 -1.4 -2.1 flagellar biosynthesis repressor FlbT compare
SMc00982 -1.4 -5.1 dioxygenase compare
SMc01991 -1.4 -2.1 short chain dehydrogenase compare
SMc01850 -1.4 -2.4 hypothetical protein compare
SMc04002 -1.3 -3.8 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc01206 -1.3 -1.8 queuine tRNA-ribosyltransferase compare
SMc02570 -1.3 -4.1 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc03900 -1.3 -9.4 cyclic beta-1,2-glucan ABc transporter compare
SMc02140 -1.3 -1.0 phosphate regulon transcriptional regulatory protein compare
SMc02850 -1.2 -2.8 DNA polymerase I compare
SMc02362 -1.2 -1.8 cytochrome c-type biogenesis protein CcmE compare
SMa1118 -1.2 -1.7 HspC2 heat shock protein compare
SMc00588 -1.2 -1.1 L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data) compare
SMc00791 -1.2 -1.8 hypothetical protein compare
SMc02569 -1.2 -2.1 imidazole glycerol phosphate synthase subunit HisF compare
SM_b20948 -1.1 -1.6 glucosyltransferase compare
SMc00302 -1.1 -2.0 hypothetical protein compare
SMc02901 -1.1 -0.9 hypothetical protein compare
SMc03967 -1.1 -0.9 Holliday junction resolvase compare
SMc04000 -1.1 -1.3 hypothetical protein compare
SMc04085 -1.1 -3.5 hypothetical protein compare
SMc01568 -1.1 -1.2 hypothetical protein compare
SMc02143 -1.1 -3.5 phosphate ABC transporter permease compare
SMc01569 -1.1 -0.5 carbamoyl phosphate synthase small subunit compare
SM_b20701 -1.1 -1.2 hypothetical protein compare
SMc04391 -1.1 -2.0 3-ketoacyl-ACP reductase compare
SMc03140 -1.1 -2.9 transcriptional regulator compare
SMc02906 -1.1 -1.0 hypothetical protein compare
SMc03127 -1.0 -1.8 ABC transporter permease compare
SMc01801 -1.0 -2.4 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SM_b20258 -1.0 -2.2 transcriptional regulator compare
SMc01765 -1.0 -1.5 hypothetical protein compare
SMc02753 -1.0 -1.1 PTS system transporter subunit IIA compare
SMc02758 -1.0 -2.0 nucleotidyl transferase compare
SMc02234 -1.0 -1.8 hypothetical protein compare
SMc00024 -1.0 -3.4 chromosome partition protein compare
SMa0789 -1.0 -1.9 GntR family transcriptional regulator compare
SMc02520 -1.0 -6.0 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SM_b20746 -1.0 -0.8 hypothetical protein compare
SMc00414 -1.0 -6.1 hypothetical protein compare
SMc02164 -1.0 -1.2 fructokinase compare
SMc00492 -1.0 -0.7 hypothetical protein compare
SMc02909 -0.9 -1.3 transglycosylase transmembrane protein compare
SMa1413 -0.9 -1.9 hypothetical protein compare
SMc00838 -0.9 -4.6 hypothetical protein compare
SMc02112 -0.9 -3.3 hypothetical protein compare
SMc03229 -0.9 -1.4 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc03833 -0.9 -2.3 hypothetical protein compare
SMc00404 -0.9 -1.0 hypothetical protein compare
SM_b21679 -0.9 -1.0 hypothetical protein compare
SMc01119 -0.9 -1.8 hypothetical protein compare
SMa0222 -0.9 -2.4 GntR family transcriptional regulator compare
SMc04382 -0.9 -8.1 beta-(1,2)-glucan production associated transmembrane protein compare
SMc02050 -0.9 -2.4 trigger factor compare
SMc02407 -0.8 -3.8 hypothetical protein compare
SMc01147 -0.8 -1.4 coproporphyrinogen III oxidase compare
SMc01578 -0.8 -4.7 aspartate aminotransferase compare
SM_b20089 -0.8 -1.9 hypothetical protein compare
SM_b20655 -0.8 -1.6 hypothetical protein compare
SMc01215 -0.8 -0.6 carbamoyl phosphate synthase large subunit compare
SMc03046 -0.8 -3.3 transcriptional regulator compare
SMa1176 -0.8 -1.9 hypothetical protein compare
SMc01501 -0.8 -1.3 mannitol 2-dehydrogenase compare
SMc02451 -0.8 -0.8 hypothetical protein compare
SMc04337 -0.8 -2.2 hypothetical protein compare
SMa5031 -0.8 -1.4 hypothetical protein compare
SMc02838 -0.8 -3.2 phosphoglyceromutase compare
SM_b20385 -0.8 -2.4 hypothetical protein compare
SMc01556 -0.8 -1.1 hypothetical protein compare
SMc00576 -0.8 -2.3 hypothetical protein compare
SMc00419 -0.8 -2.2 glutathione synthetase compare
SMc03006 -0.8 -0.9 chemotaxis regulator protein compare
SMc02695 -0.8 -4.4 GTP-dependent nucleic acid-binding protein EngD compare
SMc02861 -0.8 -1.0 phosphate transporter compare
SMc04344 -0.7 -1.7 signal peptide protein compare
SM_b20955 -0.7 -1.9 endo-beta-1,3-1,4-glycanase compare
SMc00585 -0.7 -4.4 leucyl aminopeptidase compare
SMc00806 -0.7 -1.6 hypothetical protein compare
SMa0431 -0.7 -1.0 hypothetical protein compare
SMc01178 -0.7 -1.4 multidrug transmembrane resistance signal peptide protein compare
SMc01831 -0.7 -2.3 urease accessory protein compare
SMc02825 -0.7 -2.6 aminopeptidase compare
SMc02718 -0.7 -1.6 hypothetical protein compare
SMc00427 -0.7 -1.7 peptide chain release factor RF-3 protein compare
SMc01028 -0.7 -4.5 phosphopyruvate hydratase compare
SMc00795 -0.7 -2.0 hypothetical protein compare
SMa1367 -0.7 -1.5 short chain alcohol dehydrogenase-related dehydrogenase compare
SMc02582 -0.7 -2.2 hypothetical protein compare
SMa0286 -0.7 -1.4 hypothetical protein compare
SMc01726 -0.7 -3.5 acetylglutamate kinase compare
SMc00670 -0.7 -2.3 histidine transport ATP-binding ABC transporter protein compare
SM_b20075 -0.7 -1.3 hypothetical protein compare
SMa1052 -0.7 -1.1 hypothetical protein compare
SMc00006 -0.7 -1.8 hypothetical protein compare
SMc03801 -0.7 -1.4 thioredoxin protein compare
SM_b20758 -0.7 -1.4 ArsR family transcriptional regulator compare
SMa0805 -0.7 -1.9 GabD4 succinate-semialdehyde dehdyrogenase compare
SMa1547 -0.7 -1.6 protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) compare
SM_b20474 -0.7 -1.0 hypothetical protein compare
SM_b20302 -0.7 -1.2 hypothetical protein compare
SMc02495 -0.7 -0.9 translaldolase compare
SMc03053 -0.7 -0.9 flagellar biosynthesis protein FliQ compare
SMc01930 -0.7 -1.6 hypothetical protein compare
SMc02435 -0.7 -1.3 methyltransferase compare
SMc00129 -0.7 -4.9 sensor histidine kinase compare
SMa1002 -0.7 -0.6 hypothetical protein compare
SM_b20387 -0.7 -0.9 transcriptional regulator compare
SMc03826 -0.7 -0.8 argininosuccinate synthase compare
SMc02307 -0.6 -2.7 histidinol dehydrogenase compare
SMc03839 -0.6 -1.0 hypothetical protein compare
SMc02780 -0.6 -3.2 succinate-semialdehyde dehydrogenase [NADP+] protein compare
SMc02844 -0.6 -1.0 transcriptional regulator compare
SMc02306 -0.6 -0.9 hypothetical protein compare
SMa0265 -0.6 -1.6 dehydrogenase compare
SMc01819 -0.6 -2.4 transcriptional regulator compare
SMc02488 -0.6 -2.9 hypothetical protein compare
SMc03069 -0.6 -1.6 6-phosphogluconolactonase compare
SMc04298 -0.6 -2.5 hypothetical protein compare
SMc02631 -0.6 -1.1 hypothetical protein compare
SMc01454 -0.6 -4.2 hypothetical protein compare
SMc02052 -0.6 -0.7 hypothetical protein compare
SMc04244 -0.6 -2.7 high-affinity zinc uptake system ATP-binding ABC transporter protein compare
SM_b21441 -0.6 -1.6 inosine-5'-monophosphate dehydrogenase compare
SMa1882 -0.6 -2.0 transcriptional activator compare
SMc03790 -0.6 -1.5 hypothetical protein compare
SM_b20226 -0.6 -0.9 hypothetical protein compare
SMc03996 -0.6 -2.2 thiamine-phosphate pyrophosphorylase compare
SMc01916 -0.6 -1.2 signal peptide protein compare
SM_b20725 -0.6 -1.2 hypothetical protein compare
SM_b20307 -0.6 -0.5 dihydroxyacetone kinase compare
SMa1170 -0.6 -1.2 hypothetical protein compare
SMc01342 -0.6 -2.2 hypothetical protein compare
SMc01723 -0.6 -1.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in r2a control experiments