Experiment set15IT089 for Pseudomonas fluorescens FW300-N2E3

Compare to:

L-Citrulline

200 most important genes:

  gene name fitness t score description  
AO353_02995 -4.9 -7.5 succinylglutamate desuccinylase compare
AO353_13070 -4.3 -7.8 phosphoserine phosphatase compare
AO353_20620 -3.8 -3.7 isopropylmalate isomerase compare
AO353_02040 -3.8 -2.6 integration host factor subunit beta compare
AO353_20540 -3.6 -9.9 aromatic amino acid aminotransferase compare
AO353_25635 -3.5 -6.6 citrulline utilization hydrolase (from data) conserved
AO353_13165 -3.5 -4.7 ATP phosphoribosyltransferase regulatory subunit compare
AO353_20635 -3.4 -8.3 3-isopropylmalate dehydrogenase compare
AO353_05115 -3.4 -5.7 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO353_20695 -3.3 -5.5 O-succinylhomoserine sulfhydrylase compare
AO353_25640 -3.3 -2.3 AsnC family transcriptional regulator compare
AO353_20800 -3.3 -1.3 hypothetical protein compare
AO353_22025 -3.3 -3.1 iron-sulfur cluster repair di-iron protein compare
AO353_07220 -3.2 -5.4 anthranilate synthase compare
AO353_08185 -3.2 -6.5 methionine biosynthesis protein MetW compare
AO353_20625 -3.2 -3.8 3-isopropylmalate dehydratase compare
AO353_15830 -3.2 -2.1 transcriptional regulator compare
AO353_11775 -3.1 -4.7 phosphoenolpyruvate carboxykinase [ATP] compare
AO353_07215 -3.1 -3.7 anthranilate phosphoribosyltransferase compare
AO353_08345 -3.1 -5.1 dihydroxy-acid dehydratase compare
AO353_26945 -3.1 -2.1 transcriptional regulator compare
AO353_12085 -3.1 -5.1 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO353_07230 -3.0 -12.5 anthranilate synthase compare
AO353_25630 -3.0 -7.6 arginine N-succinyltransferase compare
AO353_11850 -3.0 -5.6 3'(2'),5'-bisphosphate nucleotidase CysQ compare
AO353_02075 -2.9 -7.6 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_12070 -2.9 -5.9 imidazoleglycerol-phosphate dehydratase compare
AO353_15925 -2.9 -10.8 2-isopropylmalate synthase compare
AO353_27675 -2.9 -7.8 ATP-dependent Clp protease ATP-binding subunit ClpA compare
AO353_08475 -2.8 -6.8 phosphoserine phosphatase compare
AO353_07210 -2.8 -3.8 indole-3-glycerol-phosphate synthase compare
AO353_22800 -2.8 -1.9 sulfite reductase compare
AO353_13925 -2.8 -3.2 XRE family transcriptional regulator compare
AO353_14505 -2.8 -8.0 ketol-acid reductoisomerase compare
AO353_12090 -2.8 -1.9 imidazole glycerol phosphate synthase subunit HisF compare
AO353_03025 -2.7 -2.7 acetylornithine aminotransferase compare
AO353_01375 -2.7 -6.4 phosphate acyltransferase compare
AO353_03585 -2.7 -2.6 ATP-dependent DNA helicase RuvA compare
AO353_12365 -2.7 -2.6 phosphoribosyl-AMP cyclohydrolase compare
AO353_20665 -2.6 -8.6 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO353_07560 -2.6 -10.8 malate synthase G compare
AO353_02175 -2.6 -2.6 carbon storage regulator compare
AO353_00520 -2.6 -4.6 universal stress protein UspA compare
AO353_08180 -2.6 -9.8 homoserine O-acetyltransferase compare
AO353_07515 -2.5 -1.7 transporter compare
AO353_09720 -2.5 -1.4 hypothetical protein compare
AO353_01725 -2.5 -2.5 phosphohistidine phosphatase compare
AO353_10230 -2.5 -9.3 glycosyltransferase compare
AO353_02280 -2.5 -1.8 DNA mismatch repair protein MutS compare
AO353_02070 -2.5 -3.7 prephenate dehydratase compare
AO353_12075 -2.4 -6.0 imidazole glycerol phosphate synthase subunit HisH compare
AO353_09285 -2.4 -9.3 reactive intermediate/imine deaminase compare
AO353_17175 -2.4 -2.8 beta-ketoadipyl CoA thiolase compare
AO353_19610 -2.4 -3.9 hypothetical protein compare
AO353_22810 -2.4 -1.2 hypothetical protein compare
AO353_03035 -2.4 -4.6 AraC family transcriptional regulator compare
AO353_06460 -2.4 -7.3 hypothetical protein compare
AO353_10670 -2.4 -3.9 shikimate dehydrogenase compare
AO353_05110 -2.4 -9.1 histidinol dehydrogenase compare
AO353_03055 -2.3 -8.2 ABC transporter for L-Arginine and L-Citrulline, periplasmic substrate-binding component (from data) compare
AO353_25645 -2.3 -5.8 amino acid transporter conserved
AO353_26830 -2.3 -3.8 histidine kinase compare
AO353_17100 -2.3 -3.1 hypothetical protein compare
AO353_12360 -2.3 -6.5 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO353_01350 -2.3 -5.6 4-amino-4-deoxychorismate lyase compare
AO353_02720 -2.2 -4.7 cysteine synthase compare
AO353_02100 -2.2 -4.0 phosphoglycolate phosphatase compare
AO353_22820 -2.2 -14.2 NAD-glutamate dehydrogenase compare
AO353_20495 -2.2 -2.8 NUDIX hydrolase compare
AO353_27735 -2.2 -7.5 isocitrate lyase compare
AO353_14150 -2.2 -2.1 peptidylprolyl isomerase compare
AO353_05105 -2.2 -8.9 histidinol-phosphate aminotransferase compare
AO353_10235 -2.2 -8.5 glycosyltransferase compare
AO353_22700 -2.2 -1.9 LexA family transcriptional regulator compare
AO353_27680 -2.2 -5.0 ATP-dependent Clp protease adaptor ClpS compare
AO353_03630 -2.2 -9.0 porin compare
AO353_15900 -2.2 -2.4 GTP-binding protein compare
AO353_19280 -2.1 -2.2 hypothetical protein compare
AO353_03060 -2.1 -15.5 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) compare
AO353_01685 -2.1 -1.6 hypothetical protein compare
AO353_02685 -2.1 -2.8 phosphoribosylglycinamide formyltransferase compare
AO353_09030 -2.0 -1.2 iron donor protein CyaY compare
AO353_02220 -2.0 -1.4 hypothetical protein compare
AO353_10035 -2.0 -7.3 LysR family transcriptional regulator compare
AO353_26080 -2.0 -2.1 hypothetical protein compare
AO353_08510 -2.0 -2.4 3-phosphoglycerate dehydrogenase compare
AO353_01975 -2.0 -5.1 glycosyl transferase compare
AO353_10025 -2.0 -10.5 pyruvate carboxylase subunit B compare
AO353_14595 -2.0 -8.3 carbonate dehydratase compare
AO353_23280 -2.0 -3.6 hypothetical protein compare
AO353_00510 -2.0 -6.0 multifunctional fatty acid oxidation complex subunit alpha compare
AO353_04105 -2.0 -4.9 argininosuccinate synthase compare
AO353_02130 -2.0 -4.3 disulfide bond formation protein DsbA compare
AO353_14940 -2.0 -2.3 malate:quinone oxidoreductase compare
AO353_10710 -2.0 -3.0 tryptophan synthase subunit beta compare
AO353_08645 -1.9 -2.3 transporter compare
AO353_00865 -1.9 -7.7 phosphoenolpyruvate synthase compare
AO353_27995 -1.9 -3.8 RpiR family transcriptional regulator compare
AO353_04220 -1.9 -5.7 chemotaxis protein CheY compare
AO353_04665 -1.9 -9.2 ATPase compare
AO353_08885 -1.9 -14.6 polyphosphate kinase compare
AO353_13390 -1.9 -8.2 N-acylglucosamine 2-epimerase compare
AO353_05625 -1.9 -1.1 transcription elongation factor GreA compare
AO353_07295 -1.9 -11.2 aminoglycoside phosphotransferase compare
AO353_00430 -1.9 -2.5 glyceraldehyde-3-phosphate dehydrogenase compare
AO353_03005 -1.9 -4.7 succinylarginine dihydrolase compare
AO353_27585 -1.9 -2.8 DNA repair protein compare
AO353_27380 -1.9 -2.0 pyocin R2, holin compare
AO353_02025 -1.9 -9.2 mannose-1-phosphate guanyltransferase compare
AO353_17675 -1.8 -4.2 hypothetical protein compare
AO353_10030 -1.8 -8.4 pyruvate carboxylase subunit A compare
AO353_02940 -1.8 -2.1 DNA-binding protein compare
AO353_27335 -1.8 -2.1 hypothetical protein compare
AO353_17935 -1.8 -2.1 hypothetical protein compare
AO353_03580 -1.8 -1.7 ATP-dependent DNA helicase RuvB compare
AO353_19060 -1.8 -5.2 CysB family transcriptional regulator compare
AO353_05075 -1.8 -8.0 adenylylsulfate kinase compare
AO353_09235 -1.8 -6.5 phosphoglucomutase compare
AO353_11945 -1.8 -0.7 4-oxalocrotonate tautomerase compare
AO353_03250 -1.8 -1.5 gluconokinase compare
AO353_05010 -1.8 -1.9 HopJ type III effector protein compare
AO353_05080 -1.8 -8.0 sulfate adenylyltransferase compare
AO353_00260 -1.8 -2.3 hypothetical protein compare
AO353_09885 -1.7 -3.6 transcriptional regulator PhoU compare
AO353_09950 -1.7 -5.5 aspartate ammonia-lyase compare
AO353_19090 -1.7 -1.2 MarR family transcriptional regulator compare
AO353_03015 -1.7 -3.0 arginine N-succinyltransferase compare
AO353_04365 -1.7 -4.2 recombinase XerD compare
AO353_09135 -1.7 -1.2 cytochrome C compare
AO353_03590 -1.7 -1.6 crossover junction endodeoxyribonuclease RuvC compare
AO353_15590 -1.7 -3.7 hypothetical protein compare
AO353_11165 -1.7 -7.6 hypothetical protein compare
AO353_08350 -1.7 -5.9 hypothetical protein compare
AO353_08875 -1.7 -1.9 amino acid ABC transporter ATP-binding protein compare
AO353_07875 -1.7 -2.8 hypothetical protein compare
AO353_11750 -1.7 -1.6 ATPase compare
AO353_16380 -1.6 -3.2 hypothetical protein compare
AO353_03295 -1.6 -10.0 ribonuclease BN compare
AO353_14495 -1.6 -4.3 acetolactate synthase 3 catalytic subunit compare
AO353_26115 -1.6 -1.9 hypothetical protein compare
AO353_09560 -1.6 -1.3 type VI secretion protein compare
AO353_07290 -1.6 -6.9 mannose-1-phosphate guanylyltransferase compare
AO353_09745 -1.6 -1.5 hypothetical protein compare
AO353_18925 -1.6 -1.2 ATPase compare
AO353_25320 -1.6 -2.7 phosphoribosyl-dephospho-CoA transferase compare
AO353_07895 -1.6 -2.0 fructose-bisphosphate aldolase compare
AO353_26045 -1.6 -1.9 hypothetical protein compare
AO353_12510 -1.6 -8.5 cell division protein compare
AO353_19015 -1.6 -8.6 hypothetical protein compare
AO353_00560 -1.6 -4.0 23S rRNA methyltransferase compare
AO353_03370 -1.5 -2.9 aldose epimerase compare
AO353_08780 -1.5 -5.6 5-formyltetrahydrofolate cyclo-ligase compare
AO353_08015 -1.5 -3.8 5,10-methylenetetrahydrofolate reductase compare
AO353_22500 -1.5 -1.8 hypothetical protein compare
AO353_21770 -1.5 -2.1 3-hydroxybutyrate dehydrogenase compare
AO353_23495 -1.5 -1.5 SAM-dependent methyltransferase compare
AO353_21895 -1.5 -2.5 molybdenum cofactor biosynthesis protein MoaD compare
AO353_20340 -1.5 -2.0 gamma-carboxygeranoyl-CoA hydratase compare
AO353_14500 -1.5 -4.1 acetolactate synthase 3 regulatory subunit compare
AO353_03010 -1.5 -3.4 succinylglutamate-semialdehyde dehydrogenase compare
AO353_20175 -1.5 -1.4 ATP-dependent Clp protease proteolytic subunit compare
AO353_00875 -1.5 -6.2 transcriptional regulator compare
AO353_23620 -1.5 -1.8 hypothetical protein compare
AO353_06405 -1.5 -3.6 hypothetical protein compare
AO353_04410 -1.5 -1.6 phosphoribosylglycinamide formyltransferase compare
AO353_13600 -1.5 -2.6 precorrin-6Y C5,15-methyltransferase compare
AO353_07315 -1.5 -2.1 rRNA methyltransferase compare
AO353_10560 -1.5 -2.7 hypothetical protein compare
AO353_10430 -1.4 -2.9 chromosome partitioning protein ParB compare
AO353_00655 -1.4 -5.4 coproporphyrinogen III oxidase compare
AO353_02010 -1.4 -4.4 glycosyl transferase family 1 compare
AO353_12055 -1.4 -4.0 cell envelope biogenesis protein AsmA compare
AO353_09320 -1.4 -6.2 ATP-dependent DNA helicase RecG compare
AO353_18005 -1.4 -3.5 allophanate hydrolase compare
AO353_04565 -1.4 -3.4 nucleoid-associated protein compare
AO353_16440 -1.4 -3.0 ArsC family transcriptional regulator compare
AO353_09000 -1.4 -1.0 argininosuccinate lyase compare
AO353_14120 -1.4 -2.7 hypothetical protein compare
AO353_04440 -1.4 -3.9 hypothetical protein compare
AO353_03290 -1.4 -1.6 peptide deformylase compare
AO353_07460 -1.4 -2.1 DNA-binding protein compare
AO353_08505 -1.4 -7.0 FAD-linked oxidase compare
AO353_10170 -1.4 -6.9 fatty acid methyltransferase compare
AO353_26990 -1.4 -2.2 hypothetical protein compare
AO353_27650 -1.4 -3.4 cell division protein FtsK compare
AO353_01990 -1.4 -4.5 UDP-N-acetylglucosamine 2-epimerase compare
AO353_23745 -1.4 -3.1 acetylglucosaminylphosphatidylinositol deacetylase compare
AO353_08265 -1.4 -3.2 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
AO353_11225 -1.4 -5.2 disulfide bond formation protein DsbA compare
AO353_11780 -1.4 -2.3 hypothetical protein compare
AO353_15185 -1.3 -2.4 ATPase compare
AO353_06745 -1.3 -1.8 zinc-binding protein compare
AO353_29195 -1.3 -3.2 transposase compare
AO353_14395 -1.3 -3.2 poly(A) polymerase compare
AO353_03525 -1.3 -6.4 quinolinate synthase A compare
AO353_04135 -1.3 -5.1 bacterioferritin compare
AO353_18305 -1.3 -3.4 RNA helicase compare
AO353_29215 -1.3 -1.7 alpha/beta hydrolase compare
AO353_20590 -1.3 -1.6 hydrolase compare
AO353_26595 -1.3 -2.7 copper resistance protein CopD compare


Specific Phenotypes

For 8 genes in this experiment

For carbon source L-Citrulline in Pseudomonas fluorescens FW300-N2E3

For carbon source L-Citrulline across organisms