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Experiment set15IT076 for
Klebsiella michiganensis M5al
Compare to:
Go
rhizosphere sample 1; outgrowth in LB
200 most important genes:
gene
name
fitness
t score
description
BWI76
_RS26395
-9.1
-3.5
cell division protein FtsE
compare
BWI76
_RS26390
-8.7
-4.8
cell division protein FtsX
compare
BWI76
_RS06525
-7.2
-3.8
ATP-dependent Clp protease proteolytic subunit
compare
BWI76
_RS20190
-7.1
-3.6
NADH-quinone oxidoreductase subunit A
compare
BWI76
_RS27170
-6.8
-4.7
MltR family transcriptional regulator
compare
BWI76
_RS01210
-6.1
-2.5
tyrosine recombinase XerC
compare
BWI76
_RS20160
-5.8
-2.7
NADH-quinone oxidoreductase subunit H
compare
BWI76
_RS26460
-5.7
-3.6
4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE
compare
BWI76
_RS09645
-5.5
-1.3
thioredoxin-disulfide reductase
compare
BWI76
_RS17975
-5.4
-4.5
tail-specific protease
compare
BWI76
_RS20170
-5.3
-3.7
NADH-quinone oxidoreductase subunit F
compare
BWI76
_RS20135
-5.3
-3.4
NADH-quinone oxidoreductase subunit M
compare
BWI76
_RS06530
-5.3
-2.9
ATP-dependent Clp protease ATP-binding subunit ClpX
compare
BWI76
_RS20150
-5.2
-2.1
NADH:ubiquinone oxidoreductase subunit J
compare
BWI76
_RS01325
-4.9
-2.0
twin-arginine translocase subunit TatB
compare
BWI76
_RS08720
-4.8
-2.0
imidazolonepropionase
compare
BWI76
_RS16965
-4.7
-1.6
murein lipoprotein
compare
BWI76
_RS17720
-4.7
-1.1
muramoyltetrapeptide carboxypeptidase
compare
BWI76
_RS26245
-4.7
-3.5
transcriptional regulator
compare
BWI76
_RS27475
-4.6
-8.3
regulatory protein GntR family protein
compare
BWI76
_RS08210
-4.6
-1.6
N-acetylglucosamine-6-phosphate deacetylase
compare
BWI76
_RS20270
-4.5
-5.6
hypothetical protein
compare
BWI76
_RS22240
-4.4
-4.5
transcriptional regulator
compare
BWI76
_RS15975
-4.4
-1.0
hypothetical protein
compare
BWI76
_RS20130
-4.3
-4.7
NADH-quinone oxidoreductase subunit N
compare
BWI76
_RS20180
-4.2
-5.3
NADH-quinone oxidoreductase subunit C/D
compare
BWI76
_RS00865
-4.1
-2.9
DNA-binding transcriptional regulator OxyR
compare
BWI76
_RS27165
-4.0
-2.8
mannitol-1-phosphate 5-dehydrogenase
compare
BWI76
_RS04510
-4.0
-1.6
bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
compare
BWI76
_RS19070
-4.0
-9.0
rhamnosyltransferase
compare
BWI76
_RS20155
-4.0
-1.6
NADH-quinone oxidoreductase subunit I
compare
BWI76
_RS04715
-4.0
-1.3
division/cell wall cluster transcriptional repressor MraZ
compare
BWI76
_RS23265
-4.0
-2.2
hypothetical protein
compare
BWI76
_RS08520
-3.9
-1.6
colicin transporter TolQ
compare
BWI76
_RS20140
-3.9
-4.6
NADH-quinone oxidoreductase subunit L
compare
BWI76
_RS26190
-3.9
-5.0
glycerol-3-phosphate dehydrogenase
compare
BWI76
_RS02610
-3.8
-4.3
transcriptional regulator
compare
BWI76
_RS19055
-3.7
-8.6
dTDP-4-dehydrorhamnose 3,5-epimerase
compare
BWI76
_RS25280
-3.6
-1.2
RNase adaptor protein RapZ
compare
BWI76
_RS03595
-3.6
-1.2
ethanolamine utilization protein EutM
compare
BWI76
_RS19050
-3.6
-10.1
NAD(P)-dependent oxidoreductase
compare
BWI76
_RS25420
-3.5
-5.0
malate dehydrogenase
compare
BWI76
_RS26455
-3.4
-1.9
4-amino-4-deoxy-L-arabinose-phospho-UDP flippase
compare
BWI76
_RS25335
-3.4
-2.0
stringent starvation protein A
compare
BWI76
_RS06730
-3.4
-1.5
lac repressor
compare
BWI76
_RS17980
-3.4
-5.0
RNA chaperone ProQ
compare
BWI76
_RS19040
-3.4
-4.1
hypothetical protein
compare
BWI76
_RS22420
-3.3
-1.9
LacI family transcriptional regulator
compare
BWI76
_RS19700
-3.2
-1.9
deoxyribonuclease IV
compare
BWI76
_RS08530
-3.2
-1.1
protein TolA
compare
BWI76
_RS01350
-3.1
-0.7
NAD(P)H-flavin reductase
compare
BWI76
_RS19035
-3.0
-4.6
dTDP-rhamnosyl transferase
compare
BWI76
_RS20165
-3.0
-4.0
NADH-quinone oxidoreductase subunit G
compare
BWI76
_RS08395
-3.0
-1.2
succinate dehydrogenase cytochrome b556 large subunit
compare
BWI76
_RS24850
-3.0
-4.7
DeoR family transcriptional regulator
compare
BWI76
_RS04160
-3.0
-3.9
phosphoserine phosphatase
compare
BWI76
_RS27235
-2.9
-10.2
murein hydrolase activator EnvC
compare
BWI76
_RS08205
-2.9
-3.4
DNA-binding transcriptional dual regulator NagC
compare
BWI76
_RS15825
-2.9
-1.3
hypothetical protein
compare
BWI76
_RS03880
-2.9
-2.1
homoprotocatechuate degradation operon regulator, HpaR
compare
BWI76
_RS24075
-2.9
-2.6
glutathione synthase
compare
BWI76
_RS08425
-2.9
-2.6
succinyl-CoA ligase subunit beta
compare
BWI76
_RS04255
-2.9
-6.6
threonine synthase
compare
BWI76
_RS16955
-2.8
-0.7
hypothetical protein
compare
BWI76
_RS26775
-2.8
-4.9
endo-1,4-D-glucanase
compare
BWI76
_RS21100
-2.8
-2.1
nucleoside-diphosphate kinase
compare
BWI76
_RS09755
-2.8
-5.1
phosphoserine transaminase
compare
BWI76
_RS12040
-2.8
-0.9
hypothetical protein
compare
BWI76
_RS24025
-2.8
-4.5
agmatinase
compare
BWI76
_RS20145
-2.7
-1.1
NADH-quinone oxidoreductase subunit K
compare
BWI76
_RS19840
-2.7
-0.9
hypothetical protein
compare
BWI76
_RS04240
-2.7
-1.6
thr operon leader peptide
compare
BWI76
_RS25960
-2.7
-3.0
NUDIX hydrolase
compare
BWI76
_RS25920
-2.7
-1.5
peptidylprolyl isomerase
compare
BWI76
_RS19045
-2.7
-4.7
capsular polysaccharide biosynthesis protein
compare
BWI76
_RS08430
-2.7
-3.4
succinate--CoA ligase subunit alpha
compare
BWI76
_RS05450
-2.7
-0.9
ribonuclease HI
compare
BWI76
_RS09760
-2.7
-4.3
3-phosphoshikimate 1-carboxyvinyltransferase
compare
BWI76
_RS06490
-2.6
-4.2
cytochrome ubiquinol oxidase subunit I
compare
BWI76
_RS19770
-2.6
-1.5
bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase
compare
BWI76
_RS26570
-2.6
-2.7
anion permease
compare
BWI76
_RS04645
-2.6
-4.2
3-dehydroquinase
compare
BWI76
_RS03415
-2.6
-2.1
LacI family transcriptional regulator
compare
BWI76
_RS12070
-2.6
-0.9
hypothetical protein
compare
BWI76
_RS05835
-2.6
-1.6
gamma-glutamyl-phosphate reductase
compare
BWI76
_RS08725
-2.5
-3.7
Formiminoglutamase (EC 3.5.3.8)
(from data)
compare
BWI76
_RS06485
-2.5
-1.7
cytochrome o ubiquinol oxidase subunit III
compare
BWI76
_RS04705
-2.5
-2.3
DNA-binding transcriptional regulator FruR
compare
BWI76
_RS26940
-2.5
-6.2
transcriptional regulator
compare
BWI76
_RS00355
-2.5
-1.5
DNA polymerase I
compare
BWI76
_RS15955
-2.5
-3.2
transcriptional regulator
compare
BWI76
_RS27280
-2.5
-7.1
polymerase
compare
BWI76
_RS25060
-2.5
-2.5
lipoprotein NlpI
compare
BWI76
_RS19730
-2.4
-2.1
1-phosphofructokinase
compare
BWI76
_RS05005
-2.4
-1.3
polynucleotide adenylyltransferase
compare
BWI76
_RS00025
-2.4
-0.8
hypothetical protein
compare
BWI76
_RS26670
-2.4
-7.4
two-component sensor histidine kinase
compare
BWI76
_RS23895
-2.4
-1.2
Xaa-Pro aminopeptidase
compare
BWI76
_RS04570
-2.4
-4.1
RNA polymerase-associated protein RapA
compare
BWI76
_RS20390
-2.4
-2.1
erythronate-4-phosphate dehydrogenase
compare
BWI76
_RS07675
-2.4
-2.8
DeoR family transcriptional regulator
compare
BWI76
_RS21535
-2.4
-4.2
inner membrane protein YpjD
compare
BWI76
_RS02545
-2.4
-4.5
protease modulator HflK
compare
BWI76
_RS05260
-2.4
-1.0
chaperone
compare
BWI76
_RS18935
-2.4
-6.1
bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase
compare
BWI76
_RS07435
-2.3
-3.1
LacI family transcriptional regulator
compare
BWI76
_RS00240
-2.3
-1.5
FMN-binding protein MioC
compare
BWI76
_RS01330
-2.3
-2.8
twin-arginine translocase subunit TatC
compare
BWI76
_RS26085
-2.3
-0.9
3-dehydroquinate synthase
compare
BWI76
_RS12345
-2.3
-1.7
nitrite transporter
compare
BWI76
_RS20435
-2.3
-0.8
chorismate synthase
compare
BWI76
_RS08525
-2.3
-1.3
colicin transporter
compare
BWI76
_RS01220
-2.3
-3.8
DNA-dependent helicase II
compare
BWI76
_RS09640
-2.3
-1.3
cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
compare
BWI76
_RS05120
-2.2
-4.9
bifunctional glycosyl transferase/transpeptidase
compare
BWI76
_RS23360
-2.2
-2.4
diaminopimelate decarboxylase
compare
BWI76
_RS18950
-2.2
-3.4
imidazole glycerol phosphate synthase cyclase subunit
compare
BWI76
_RS16605
-2.2
-4.2
hypothetical protein
compare
BWI76
_RS16485
-2.2
-0.7
ribonuclease T
compare
BWI76
_RS23915
-2.2
-1.3
5-formyltetrahydrofolate cyclo-ligase
compare
BWI76
_RS18920
-2.2
-2.0
ATP phosphoribosyltransferase
compare
BWI76
_RS10575
-2.2
-1.1
polar amino acid ABC transporter permease
compare
BWI76
_RS27430
-2.2
-0.7
(p)ppGpp synthetase
compare
BWI76
_RS00345
-2.2
-2.6
protein disulfide oxidoreductase DsbA
compare
BWI76
_RS14170
-2.2
-1.9
hypothetical protein
compare
BWI76
_RS01115
-2.2
-1.9
dTDP-4-amino-4,6-dideoxygalactose transaminase
compare
BWI76
_RS20355
-2.2
-1.9
colicin V production protein
compare
BWI76
_RS14835
-2.1
-1.0
hypothetical protein
compare
BWI76
_RS27915
-2.1
-1.3
YceK/YidQ family lipoprotein
compare
BWI76
_RS10305
-2.1
-6.0
transposase
compare
BWI76
_RS19010
-2.1
-1.3
polysaccharide pyruvyl transferase yvff
compare
BWI76
_RS18940
-2.1
-3.6
imidazole glycerol phosphate synthase subunit HisH
compare
BWI76
_RS19705
-2.1
-3.0
kinase
compare
BWI76
_RS26470
-2.1
-2.9
4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase
compare
BWI76
_RS13820
-2.1
-1.1
hypothetical protein
compare
BWI76
_RS21810
-2.1
-1.0
universal stress protein
compare
BWI76
_RS23920
-2.1
-3.7
D-3-phosphoglycerate dehydrogenase
compare
BWI76
_RS19060
-2.0
-10.8
glucose-1-phosphate thymidylyltransferase
compare
BWI76
_RS26410
-2.0
-1.1
membrane protein
compare
BWI76
_RS08385
-2.0
-1.0
citrate (Si)-synthase
compare
BWI76
_RS21370
-2.0
-0.6
ATP-dependent RNA helicase SrmB
compare
BWI76
_RS08535
-2.0
-0.8
translocation protein TolB
compare
BWI76
_RS02970
-2.0
-3.6
trehalose operon repressor
compare
BWI76
_RS09725
-2.0
-2.3
MurR/RpiR family transcriptional regulator
compare
BWI76
_RS14390
-2.0
-0.6
hypothetical protein
compare
BWI76
_RS09660
-2.0
-1.0
DNA translocase FtsK
compare
BWI76
_RS21715
-2.0
-1.2
transcriptional regulator
compare
BWI76
_RS00400
-2.0
-0.8
glutamine synthetase
compare
BWI76
_RS04250
-2.0
-4.3
homoserine kinase
compare
BWI76
_RS00380
-1.9
-4.5
oxygen-independent coproporphyrinogen III oxidase
compare
BWI76
_RS05840
-1.9
-3.7
glutamate 5-kinase
compare
BWI76
_RS12320
-1.9
-6.3
hypothetical protein
compare
BWI76
_RS04465
-1.9
-2.7
carbamoyl-phosphate synthase small subunit
compare
BWI76
_RS18550
-1.9
-1.0
tRNA-Asn
compare
BWI76
_RS27305
-1.9
-5.1
glycosyl transferase
compare
BWI76
_RS19085
-1.9
-9.5
protein-tyrosine-phosphatase
compare
BWI76
_RS27275
-1.9
-4.7
hypothetical protein
compare
BWI76
_RS20380
-1.9
-0.6
tRNA pseudouridine(38-40) synthase TruA
compare
BWI76
_RS10465
-1.9
-1.8
hypothetical protein
compare
BWI76
_RS12090
-1.9
-1.7
HNH endonuclease
compare
BWI76
_RS21675
-1.9
-0.8
hypothetical protein
compare
BWI76
_RS20895
-1.9
-3.3
phosphoribosylaminoimidazolesuccinocarboxamide synthase
compare
BWI76
_RS10990
-1.8
-1.5
dihydroorotase
compare
BWI76
_RS27950
-1.8
-2.0
transcriptional regulator
compare
BWI76
_RS13590
-1.8
-1.3
hypothetical protein
compare
BWI76
_RS23830
-1.8
-4.1
hypothetical protein
compare
BWI76
_RS14320
-1.8
-0.9
hypothetical protein
compare
BWI76
_RS11255
-1.8
-0.9
putrescine/spermidine ABC transporter ATP-binding protein
compare
BWI76
_RS18455
-1.8
-0.8
tRNA-Ser
compare
BWI76
_RS24635
-1.8
-2.0
autoinducer-2 (AI-2) modifying protein LsrG
compare
BWI76
_RS04305
-1.8
-0.6
molecular chaperone DnaJ
compare
BWI76
_RS06545
-1.8
-2.3
peptidylprolyl isomerase
compare
BWI76
_RS27440
-1.8
-2.8
DNA helicase RecG
compare
BWI76
_RS24585
-1.8
-2.0
glycerol dehydrogenase
compare
BWI76
_RS09190
-1.8
-1.7
hypothetical protein
compare
BWI76
_RS12220
-1.8
-7.1
hypothetical protein
compare
BWI76
_RS01120
-1.8
-3.5
O-antigen translocase
compare
BWI76
_RS10035
-1.8
-1.0
hypothetical protein
compare
BWI76
_RS16900
-1.7
-1.5
4-hydroxy-2-oxovalerate aldolase
compare
BWI76
_RS02580
-1.7
-0.9
23S rRNA (guanosine(2251)-2'-O)-methyltransferase
compare
BWI76
_RS20795
-1.7
-0.7
ethanolamine catabolic microcompartment shell protein EutN
compare
BWI76
_RS04470
-1.7
-5.1
carbamoyl phosphate synthase large subunit
compare
BWI76
_RS12400
-1.7
-3.7
TetR family transcriptional regulator
compare
BWI76
_RS01095
-1.7
-1.3
UDP-N-acetyl-D-mannosamine dehydrogenase
compare
BWI76
_RS24120
-1.7
-3.1
YggW family oxidoreductase
compare
BWI76
_RS11845
-1.7
-1.7
tryptophan synthase subunit beta
compare
BWI76
_RS11155
-1.7
-1.2
penicillin-binding protein activator LpoB
compare
BWI76
_RS06765
-1.7
-2.1
transcriptional regulator
compare
BWI76
_RS23365
-1.7
-3.8
LysR family transcriptional regulator
compare
BWI76
_RS19905
-1.7
-3.1
OmpK36 porin
compare
BWI76
_RS04670
-1.7
-5.5
3-isopropylmalate dehydratase large subunit
compare
BWI76
_RS21685
-1.7
-0.8
hypothetical protein
compare
BWI76
_RS00180
-1.7
-0.6
F0F1 ATP synthase subunit epsilon
compare
BWI76
_RS01110
-1.7
-2.4
TDP-fucosamine acetyltransferase
compare
BWI76
_RS15115
-1.7
-3.9
MFS transporter
compare
BWI76
_RS25480
-1.7
-1.7
ribonuclease E/G
compare
BWI76
_RS25600
-1.7
-0.6
tRNA-Thr
compare
BWI76
_RS00850
-1.7
-5.0
acetylglutamate kinase
compare
BWI76
_RS00760
-1.7
-4.6
cell division protein FtsN
compare
BWI76
_RS00855
-1.7
-6.6
argininosuccinate lyase
compare
Specific Phenotypes
For 25 genes in this experiment