Experiment set15IT060 for Pseudomonas fluorescens SBW25-INTG

Compare to:

Glucose (C) and Ammonium chloride (N); with MOPS

200 most detrimental genes:

  gene name fitness t score description  
PFLU_RS29480 +1.9 14.8 exodeoxyribonuclease III compare
PFLU_RS14805 +1.5 2.7 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
PFLU_RS08665 +1.5 4.5 cytochrome c maturation protein CcmE compare
PFLU_RS12800 +1.4 2.4 amino acid ABC transporter ATP-binding protein compare
PFLU_RS31675 +1.4 2.7 hypothetical protein compare
PFLU_RS26660 +1.4 3.7 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
PFLU_RS14050 +1.4 2.4 hypothetical protein compare
PFLU_RS28310 +1.4 2.0 response regulator compare
PFLU_RS00460 +1.3 9.6 glutamate/aspartate:proton symporter GltP compare
PFLU_RS29810 +1.2 8.0 LysR family transcriptional regulator compare
PFLU_RS21795 +1.1 10.3 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS31590 +1.1 2.0 hypothetical protein compare
PFLU_RS13370 +1.1 1.1 DUF2790 domain-containing protein compare
PFLU_RS13350 +1.1 1.8 ParD-like family protein compare
PFLU_RS29400 +1.1 2.2 DUF1127 domain-containing protein compare
PFLU_RS29065 +1.1 1.5 amino acid ABC transporter ATP-binding protein compare
PFLU_RS31825 +1.1 4.8 hypothetical protein compare
PFLU_RS10765 +1.0 8.1 UvrY/SirA/GacA family response regulator transcription factor compare
PFLU_RS05020 +1.0 1.3 DUF1120 domain-containing protein compare
PFLU_RS14550 +1.0 5.3 UTP--glucose-1-phosphate uridylyltransferase GalU compare
PFLU_RS02825 +1.0 1.7 phosphate starvation-inducible protein PsiF compare
PFLU_RS13945 +0.9 2.0 hypothetical protein compare
PFLU_RS27300 +0.9 8.3 peptidoglycan DD-metalloendopeptidase family protein compare
PFLU_RS10405 +0.9 2.2 helix-turn-helix transcriptional regulator compare
PFLU_RS18410 +0.9 4.0 response regulator compare
PFLU_RS00445 +0.9 2.4 hypothetical protein compare
PFLU_RS23325 +0.9 6.3 GlxA family transcriptional regulator compare
PFLU_RS08660 +0.9 1.9 heme exporter protein CcmD compare
PFLU_RS25865 +0.9 1.9 YhbY family RNA-binding protein compare
PFLU_RS11885 +0.9 0.9 type II secretion system protein M compare
PFLU_RS00040 +0.9 7.0 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
PFLU_RS12915 +0.9 2.6 methyltransferase domain-containing protein compare
PFLU_RS06745 +0.9 4.4 protocatechuate 3,4-dioxygenase subunit alpha compare
PFLU_RS13665 +0.8 1.3 MarR family transcriptional regulator compare
PFLU_RS07775 +0.8 3.6 DUF4404 family protein compare
PFLU_RS31580 +0.8 2.9 hypothetical protein compare
PFLU_RS02575 +0.8 5.5 GTPase HflX compare
PFLU_RS25225 +0.8 4.9 disulfide bond formation protein B compare
PFLU_RS00850 +0.8 2.3 hypothetical protein compare
PFLU_RS04530 +0.8 1.8 hypothetical protein compare
PFLU_RS15910 +0.7 1.6 homoprotocatechuate degradation operon regulator HpaR compare
PFLU_RS31635 +0.7 1.9 IS21 family transposase compare
PFLU_RS00410 +0.7 5.6 cytochrome c4 compare
PFLU_RS04200 +0.7 5.9 cytochrome bc complex cytochrome b subunit compare
PFLU_RS00405 +0.7 3.5 cytochrome c5 family protein compare
PFLU_RS30790 +0.7 1.5 hypothetical protein compare
PFLU_RS23595 +0.7 5.9 LacI family DNA-binding transcriptional regulator compare
PFLU_RS04205 +0.7 5.2 cytochrome c1 compare
PFLU_RS20390 +0.7 1.8 DUF1654 domain-containing protein compare
PFLU_RS22535 +0.7 5.9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase compare
PFLU_RS21765 +0.7 4.2 flagellar assembly protein FliH compare
PFLU_RS13200 +0.7 2.6 Ldh family oxidoreductase compare
PFLU_RS14555 +0.7 3.5 glutathione-disulfide reductase compare
PFLU_RS18885 +0.7 1.6 peptidyl-prolyl cis-trans isomerase compare
PFLU_RS15810 +0.7 1.8 hypothetical protein compare
PFLU_RS18515 +0.7 1.8 fluoride efflux transporter CrcB compare
PFLU_RS09480 +0.7 1.4 hypothetical protein compare
PFLU_RS17005 +0.7 2.5 tRNA hydroxylase compare
PFLU_RS08650 +0.7 1.1 heme exporter protein CcmB compare
PFLU_RS16440 +0.7 2.9 acyl-CoA dehydrogenase compare
PFLU_RS13250 +0.6 3.0 sugar kinase compare
PFLU_RS13205 +0.6 2.2 DUF883 family protein compare
PFLU_RS03995 +0.6 0.7 hypothetical protein compare
PFLU_RS30905 +0.6 2.3 hypothetical protein compare
PFLU_RS02555 +0.6 3.0 AMIN domain-containing protein compare
PFLU_RS07935 +0.6 2.1 type 1 fimbrial protein compare
PFLU_RS21910 +0.6 5.5 BamA/TamA family outer membrane protein compare
PFLU_RS30470 +0.6 1.8 addiction module antidote protein compare
PFLU_RS30730 +0.6 1.3 helix-turn-helix domain-containing protein compare
PFLU_RS02365 +0.6 4.8 glycosyltransferase compare
PFLU_RS12025 +0.6 2.6 crotonase/enoyl-CoA hydratase family protein compare
PFLU_RS23430 +0.6 3.1 TetR/AcrR family transcriptional regulator compare
PFLU_RS01860 +0.6 2.4 amino acid ABC transporter ATP-binding protein compare
PFLU_RS07630 +0.6 5.2 transglycosylase SLT domain-containing protein compare
PFLU_RS18115 +0.6 2.6 thioesterase compare
PFLU_RS31465 +0.6 3.5 hypothetical protein compare
PFLU_RS07695 +0.6 1.9 beta-N-acetylhexosaminidase compare
PFLU_RS25220 +0.6 3.5 ubiquinol oxidase subunit II compare
PFLU_RS23015 +0.6 2.9 TetR/AcrR family transcriptional regulator compare
PFLU_RS17850 +0.6 1.9 hypothetical protein compare
PFLU_RS12260 +0.6 1.1 hypothetical protein compare
PFLU_RS26595 +0.6 1.0 lipoprotein compare
PFLU_RS08360 +0.6 2.5 hypothetical protein compare
PFLU_RS18040 +0.6 2.1 GGDEF domain-containing protein compare
PFLU_RS17545 +0.6 0.9 DUF465 domain-containing protein compare
PFLU_RS02105 +0.6 3.3 NAD(P)/FAD-dependent oxidoreductase compare
PFLU_RS13065 +0.6 3.0 ser/threonine protein phosphatase compare
PFLU_RS29780 +0.6 3.1 acyl-CoA thioesterase compare
PFLU_RS14715 +0.6 3.9 protein-glutamate O-methyltransferase CheR compare
PFLU_RS15485 +0.6 2.9 SDR family oxidoreductase compare
PFLU_RS22370 +0.6 4.4 cadmium-translocating P-type ATPase compare
PFLU_RS25210 +0.6 2.5 cytochrome o ubiquinol oxidase subunit III compare
PFLU_RS15790 +0.6 2.1 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
PFLU_RS15470 +0.6 1.2 LysR family transcriptional regulator compare
PFLU_RS12840 +0.6 1.0 3-hydroxybutyrate dehydrogenase compare
PFLU_RS25215 +0.6 3.8 cytochrome o ubiquinol oxidase subunit I compare
PFLU_RS16310 +0.6 1.3 hypothetical protein compare
PFLU_RS22640 +0.6 4.2 PLP-dependent aminotransferase family protein compare
PFLU_RS16845 +0.6 2.4 helix-turn-helix transcriptional regulator compare
PFLU_RS19550 +0.5 0.8 ABC transporter ATP-binding protein compare
PFLU_RS14980 +0.5 2.3 RidA family protein compare
PFLU_RS20730 +0.5 1.3 hypothetical protein compare
PFLU_RS09495 +0.5 1.9 helix-turn-helix transcriptional regulator compare
PFLU_RS08280 +0.5 1.7 hypothetical protein compare
PFLU_RS11720 +0.5 1.8 hypothetical protein compare
PFLU_RS14320 +0.5 1.3 DUF2946 domain-containing protein compare
PFLU_RS03600 +0.5 2.1 hypothetical protein compare
PFLU_RS21850 +0.5 4.2 flagellar basal body L-ring protein FlgH compare
PFLU_RS31755 +0.5 1.1 hypothetical protein compare
PFLU_RS00310 +0.5 1.2 twin transmembrane helix small protein compare
PFLU_RS21530 +0.5 4.5 transporter substrate-binding domain-containing protein compare
PFLU_RS14370 +0.5 1.5 hypothetical protein compare
PFLU_RS31405 +0.5 3.3 hypothetical protein compare
PFLU_RS20395 +0.5 3.5 deoxyribonuclease compare
PFLU_RS20625 +0.5 1.4 TetR/AcrR family transcriptional regulator compare
PFLU_RS23350 +0.5 3.6 ABC transporter substrate-binding protein compare
PFLU_RS01475 +0.5 4.5 UDP-forming cellulose synthase catalytic subunit compare
PFLU_RS23180 +0.5 3.7 flagellar basal body rod protein FlgB compare
PFLU_RS12945 +0.5 1.7 hypothetical protein compare
PFLU_RS16115 +0.5 2.7 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS05620 +0.5 2.1 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS04195 +0.5 2.0 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
PFLU_RS24175 +0.5 2.7 bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ compare
PFLU_RS19830 +0.5 1.5 type VI secretion system tube protein Hcp compare
PFLU_RS21695 +0.5 2.6 flagellar biosynthesis protein FlhB compare
PFLU_RS26350 +0.5 2.8 RNA polymerase sigma factor compare
PFLU_RS14075 +0.5 1.7 hypothetical protein compare
PFLU_RS11285 +0.5 1.5 hypothetical protein compare
PFLU_RS22395 +0.5 2.2 fumarate/nitrate reduction transcriptional regulator Fnr compare
PFLU_RS25115 +0.5 1.8 cytochrome c family protein compare
PFLU_RS18000 +0.5 1.1 AhpC/TSA family protein compare
PFLU_RS03555 +0.5 0.5 EscS/YscS/HrcS family type III secretion system export apparatus protein compare
PFLU_RS02580 +0.5 3.2 FtsH protease activity modulator HflK compare
PFLU_RS19010 +0.5 1.7 sigma-70 family RNA polymerase sigma factor compare
PFLU_RS22375 +0.5 3.6 cbb3-type cytochrome oxidase assembly protein CcoS compare
PFLU_RS29165 +0.5 1.5 TIGR02444 family protein compare
PFLU_RS22610 +0.5 1.5 hypothetical protein compare
PFLU_RS26525 +0.5 4.5 hybrid sensor histidine kinase/response regulator compare
PFLU_RS14910 +0.5 2.5 ATP-binding protein compare
PFLU_RS31530 +0.5 0.5 transposase compare
PFLU_RS28180 +0.5 2.9 DEAD/DEAH box helicase compare
PFLU_RS26165 +0.5 1.9 hypothetical protein compare
PFLU_RS10500 +0.5 1.7 DUF480 domain-containing protein compare
PFLU_RS21580 +0.5 1.4 MOSC domain-containing protein compare
PFLU_RS13150 +0.5 1.6 hypothetical protein compare
PFLU_RS07195 +0.5 1.9 hypothetical protein compare
PFLU_RS14995 +0.5 1.1 response regulator transcription factor compare
PFLU_RS19650 +0.5 2.5 biotin-dependent carboxyltransferase family protein compare
PFLU_RS05780 +0.5 3.0 helix-turn-helix transcriptional regulator compare
PFLU_RS11640 +0.5 1.6 aldehyde dehydrogenase (NADP(+)) compare
PFLU_RS20210 +0.5 1.9 hypothetical protein compare
PFLU_RS26145 +0.5 0.9 hypothetical protein compare
PFLU_RS09600 +0.5 1.7 LysR family transcriptional regulator compare
PFLU_RS15435 +0.5 1.9 hypothetical protein compare
PFLU_RS19800 +0.5 1.6 cupin domain-containing protein compare
PFLU_RS17160 +0.5 1.2 hypothetical protein compare
PFLU_RS02370 +0.5 2.7 glycosyltransferase compare
PFLU_RS15565 +0.5 1.8 SDR family oxidoreductase compare
PFLU_RS01960 +0.5 0.7 ATP-dependent protease ATPase subunit HslU compare
PFLU_RS30555 +0.5 1.1 hypothetical protein compare
PFLU_RS16865 +0.5 1.5 hypothetical protein compare
PFLU_RS04780 +0.5 1.5 hypothetical protein compare
PFLU_RS19875 +0.4 1.7 amino acid ABC transporter ATP-binding protein compare
PFLU_RS27690 +0.4 0.8 response regulator compare
PFLU_RS09570 +0.4 2.4 ornithine cyclodeaminase family protein compare
PFLU_RS23450 +0.4 2.6 LysR family transcriptional regulator compare
PFLU_RS25190 +0.4 1.3 hypothetical protein compare
PFLU_RS18225 +0.4 1.3 helix-turn-helix transcriptional regulator compare
PFLU_RS30390 +0.4 1.2 type III secretion system rspB compare
PFLU_RS24695 +0.4 0.9 PTS glucose transporter subunit IIB compare
PFLU_RS20770 +0.4 1.5 membrane protein compare
PFLU_RS28315 +0.4 0.6 response regulator compare
PFLU_RS11440 +0.4 2.2 DUF1989 domain-containing protein compare
PFLU_RS26400 +0.4 1.7 HAD family hydrolase compare
PFLU_RS14190 +0.4 2.3 Ku protein compare
PFLU_RS20705 +0.4 1.5 hypothetical protein compare
PFLU_RS19595 +0.4 1.9 iron export ABC transporter permease subunit FetB compare
PFLU_RS22400 +0.4 1.5 adenine phosphoribosyltransferase compare
PFLU_RS31190 +0.4 2.6 taurine ABC transporter substrate-binding protein compare
PFLU_RS08990 +0.4 0.3 hypothetical protein compare
PFLU_RS15240 +0.4 2.1 tetratricopeptide repeat protein compare
PFLU_RS17660 +0.4 1.9 DUF2946 domain-containing protein compare
PFLU_RS28290 +0.4 2.7 chemotaxis protein CheW compare
PFLU_RS13180 +0.4 1.6 hypothetical protein compare
PFLU_RS17035 +0.4 2.4 2-hydroxyacid dehydrogenase compare
PFLU_RS23675 +0.4 1.2 hypothetical protein compare
PFLU_RS31520 +0.4 1.5 TonB-dependent receptor compare
PFLU_RS30890 +0.4 1.7 hypothetical protein compare
PFLU_RS16710 +0.4 1.4 nitrite reductase small subunit NirD compare
PFLU_RS16785 +0.4 0.9 GAF domain-containing protein compare
PFLU_RS14670 +0.4 1.6 GNAT family N-acetyltransferase compare
PFLU_RS28725 +0.4 3.0 DUF2059 domain-containing protein compare
PFLU_RS14135 +0.4 1.5 hypothetical protein compare
PFLU_RS19655 +0.4 2.8 5-oxoprolinase subunit PxpB compare
PFLU_RS03260 +0.4 1.9 hypothetical protein compare
PFLU_RS31225 +0.4 2.1 membrane protein insertion efficiency factor YidD compare
PFLU_RS19820 +0.4 1.7 GNAT family N-acetyltransferase compare
PFLU_RS22365 +0.4 2.3 membrane protein compare
PFLU_RS19870 +0.4 1.5 ABC transporter substrate-binding protein compare
PFLU_RS07600 +0.4 1.5 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM compare


Specific Phenotypes

For 1 genes in this experiment

For no stress control D-Glucose in Pseudomonas fluorescens SBW25-INTG

For no stress control D-Glucose across organisms