Experiment set15IT025 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

MoLS4 with L-Cysteine 5mM as nutrient

200 most detrimental genes:

  gene name fitness t score description  
DVU3223 aspB +6.0 39.7 aspartate aminotransferase (TIGR) compare
DVU2206 +3.9 7.7 conserved hypothetical protein (TIGR) compare
DVU0715 livG +2.5 8.1 branched-chain amino acid ABC transporter, ATP binding protein (TIGR) compare
DVU0712 +2.4 16.5 amino acid ABC transporter, periplasmic-binding protein (TIGR) compare
DVU0716 livF +2.4 10.3 branched-chain amino acid ABC transporter, ATP-binding protein (TIGR) compare
DVU2298 opuBB +2.3 11.4 glycine/betaine/L-proline ABC transporter, permease protein (TIGR) compare
DVU0713 livH +2.3 11.5 branched-chain amino acid ABC transporter, permease protein (TIGR) compare
DVU0714 livM +2.2 10.5 branched-chain amino acid ABC transporter, permease protein (TIGR) compare
DVU2297 +2.1 5.4 glycine/betaine/L-proline ABC transporter, periplasmic-binding protein (TIGR) compare
DVU2300 +2.0 2.4 hypothetical protein (TIGR) compare
DVU2299 proV +2.0 9.8 glycine/betaine/L-proline ABC transporter, ATP binding protein (TIGR) compare
DVU2577 +2.0 6.8 DNA-binding response regulator, LuxR family (TIGR) compare
DORF35977 +1.9 8.9 no description compare
DVU0365 +1.7 8.7 conserved hypothetical protein (TIGR) compare
DVU1600 +1.7 7.6 adenylate cyclase (TIGR) compare
DVU0951 moeA-2 +1.7 6.1 molybdopterin biosynthesis MoeA protein, putative (TIGR) compare
DVU0966 +1.7 7.5 amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) compare
DVU0967 +1.6 10.1 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU0451 +1.6 11.8 chloride channel family protein (TIGR) compare
DVU2990 moeA +1.5 11.4 molybdopterin biosynthesis MoeA protein (TIGR) compare
DVU2578 +1.5 6.3 response regulator (TIGR) compare
DVU0968 +1.5 7.2 amino acid ABC transporter, ATP-binding protein (TIGR) compare
DVU1377 ilvN-2 +1.5 1.1 acetolactate synthase, small subunit (TIGR) compare
DVU0971 +1.4 6.9 molybdenum cofactor biosynthesis protein (TIGR) compare
DVU0484 +1.4 4.5 ABC transporter, ATP-binding protein (TIGR) compare
DVU0684 hflK +1.3 4.7 hflK protein, putative (TIGR) compare
DVU0683 +1.3 7.0 hflC protein, putative (TIGR) compare
DVU0547 +1.3 8.5 high-affinity branched chain amino acid ABC transporter, periplasmic branched chain amino acid-binding protein (TIGR) compare
DVU1092 +1.3 8.7 sodium-dependent symporter family protein (TIGR) compare
DVU2109 mrp +1.3 6.4 MTH1175-like domain family protein (TIGR) compare
DVU1567 +1.2 5.4 hypothetical protein (TIGR) compare
DVU0551 livF +1.2 5.3 high-affinity branched-chain amino acid ABC transporter ATP-binding protein (TIGR) compare
DVU1280 +1.2 2.7 conserved hypothetical protein TIGR00159 (TIGR) compare
DVU2669 +1.2 3.6 conserved domain protein (TIGR) compare
DVU0548 livH +1.2 4.1 high-affinity branched-chain amino acid ABC transporter, permease protein (TIGR) compare
DVU1791 +1.1 1.8 GatB/Yqey family protein (TIGR) compare
DVU0690 +1.1 5.8 conserved hypothetical protein (TIGR) compare
DVU0580 moaA +1.1 5.5 molybdenum cofactor biosynthesis protein A (TIGR) compare
DVU0550 livG +1.1 4.9 high-affinity branched-chain amino acid ABC transporter, ATP binding protein (TIGR) compare
DVU1281 +1.1 5.6 conserved hypothetical protein (TIGR) compare
DVU0549 +1.1 4.8 proline/arginine ABC transporter, permease component (from data) compare
DVU1337 lon +1.1 5.9 ATP-dependent protease La (TIGR) compare
DVU0485 +1.1 3.9 membrane protein, putative (TIGR) compare
DVU0965 +1.0 0.8 hypothetical protein (TIGR) compare
DVU3364 +1.0 2.8 conserved hypothetical protein (TIGR) compare
DVU1179 aor +1.0 6.1 aldehyde:ferredoxin oxidoreductase, tungsten-containing (TIGR) compare
DORF13021 +1.0 2.6 no description compare
DVU1420 +1.0 1.4 Hpt domain protein (TIGR) compare
DVU0440 +1.0 6.8 conserved hypothetical protein (TIGR) compare
DVU1842 +0.9 0.9 lipoprotein, putative (TIGR) compare
DVU0034 +0.9 5.1 DSBA-like thioredoxin domain protein (TIGR) compare
DVU0598 +0.9 2.4 carbon starvation protein A, putative (TIGR) compare
DVU3348 +0.9 1.1 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit, putative (TIGR) compare
DVU2703 +0.9 0.8 hypothetical protein (TIGR) compare
DVU1651 +0.9 1.5 conserved hypothetical protein (TIGR) compare
DVU0511 +0.9 1.8 conserved hypothetical protein (TIGR) compare
DVU1653 +0.9 1.6 polyA polymerase family protein (TIGR) compare
DVU0859 +0.9 4.6 hypothetical protein (TIGR) compare
DVU1078 +0.9 4.6 R3H domain protein (TIGR) compare
DVU0424 cls +0.9 5.5 cardiolipin synthetase (TIGR) compare
DVU0257 +0.8 1.3 acetyltransferase, GNAT family (TIGR) compare
DVU2212 +0.8 4.9 conserved hypothetical protein (TIGR) compare
DVU1245 +0.8 2.7 ABC transporter, ATP-binding protein (TIGR) compare
DVU0698 rfbC +0.8 4.4 dTDP-4-dehydrorhamnose 3,5-epimerase (TIGR) compare
DVU1848 +0.8 3.9 conserved hypothetical protein (TIGR) compare
DVU2479 pstA-2 +0.8 2.5 phosphate ABC transporter, permease protein, putative (TIGR) compare
DVU3302 +0.8 2.1 hypothetical protein (TIGR) compare
DVU0411 +0.8 5.1 heptosyltransferase family protein (TIGR) compare
DVU1030 +0.8 2.2 universal stress protein family (TIGR) compare
DVU1838 trxB-2 +0.8 1.9 thioredoxin reductase (TIGR) compare
DVU1843 +0.8 2.7 hypothetical protein (TIGR) compare
DVU0486 +0.8 3.4 hypothetical protein (TIGR) compare
DVU2105 +0.8 3.8 hypothetical protein (TIGR) compare
DVU3304 +0.8 5.6 SEED: integral membrane sensor signal transduction histidine kinase compare
DVU2083 relA +0.8 1.5 GTP pyrophosphokinase (TIGR) compare
DVU1246 +0.8 2.8 membrane protein, putative (TIGR) compare
DVU3369 +0.7 2.7 conserved domain protein (TIGR) compare
DVU1446 +0.7 3.4 heptosyltransferase family protein (TIGR) compare
DVU1409 +0.7 1.0 hypothetical protein (TIGR) compare
DVU2477 pstS +0.7 5.2 phosphate ABC transporter, periplasmic phosphate-binding protein, putative (TIGR) compare
DVU2877 +0.7 2.4 hypothetical protein (TIGR) compare
DVU1631 +0.7 3.8 conserved hypothetical protein (TIGR) compare
DVU2725 +0.7 0.6 membrane protein, putative (TIGR) compare
DORF10286 +0.7 3.0 no description compare
DVU2251 +0.7 3.1 DNA-binding protein (TIGR) compare
DVU2747 +0.7 5.2 hypothetical protein (TIGR) compare
DVU0046 fliN +0.7 3.6 flagellar motor switch protein FliN (TIGR) compare
DVU0045 +0.7 2.6 flagellar biosynthesis protein, FliO, putative (TIGR) compare
DVU2096 +0.7 1.8 hypothetical protein (TIGR) compare
DVU0507 +0.7 1.3 conserved hypothetical protein (TIGR) compare
DVU2864 +0.7 1.5 hypothetical protein (TIGR) compare
DVU1084 pstB-1 +0.7 2.8 phosphate ABC transporter, ATP-binding protein (TIGR) compare
DVU3350 oorD +0.7 0.9 iron-sulfur cluster-binding protein (TIGR) compare
DORF7824 +0.7 3.6 SEED: FIG00603141: hypothetical protein compare
DVU3193 +0.7 2.2 DNA-binding domain, excisionase family (TIGR) compare
DVU2960 ntrC +0.7 5.3 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU0289 moaC +0.7 3.4 molybdenum cofactor biosynthesis protein C (TIGR) compare
DVU2417 +0.7 1.8 SlyX protein (TIGR) compare
DVU1244 +0.7 2.1 conserved hypothetical protein (TIGR) compare
DVU1465 +0.7 4.6 CgeB family protein (TIGR) compare
DORF43335 +0.7 0.8 no description compare
DVU0047 +0.7 4.0 flagellar protein FliL (TIGR) compare
DVU2785 pdhR +0.7 1.8 transcriptional regulator, GntR family (TIGR) compare
DVU0513 flgG +0.7 4.0 flagellar basal-body rod protein FlgG (TIGR) compare
DVU2909 +0.7 3.5 transcriptional regulator, MarR family (TIGR) compare
DVU1243 +0.7 3.1 conserved hypothetical protein (TIGR) compare
DVU0163 +0.6 2.2 lipoprotein, putative (TIGR) compare
DVU1499 +0.6 2.1 hypothetical protein (TIGR) compare
DVU3093 rdl +0.6 2.1 rubredoxin-like protein (TIGR) compare
DVU1630 ptsN +0.6 0.7 PTS system, IIA component (TIGR) compare
DVU0392 +0.6 3.1 aromatic aminotransferase (TIGR) compare
DVU1464 +0.6 2.7 heptosyltransferase family protein (TIGR) compare
DORF8192 +0.6 1.0 SEED: FIG00606834: hypothetical protein compare
DVU1363 rfbD +0.6 2.7 dTDP-4-dehydrorhamnose reductase (TIGR) compare
DVU2057 +0.6 1.9 conserved hypothetical protein (TIGR) compare
DVU1460 +0.6 0.8 hypothetical protein (TIGR) compare
DVU0428 +0.6 1.1 conserved hypothetical protein (TIGR) compare
DVU1436 +0.6 0.5 hypothetical protein (TIGR) compare
DVU2582 +0.6 2.1 transcriptional regulator, TetR family (TIGR) compare
DVU3305 atoC +0.6 4.1 sigma-54 dependent transcriptional regulator/response regulator (TIGR) compare
DVU0522 yviF +0.6 1.7 conserved hypothetical protein (TIGR) compare
DVU3287 +0.6 3.9 glycosyl transferase, group 2 family protein (TIGR) compare
DVU2132 +0.6 1.6 hypothetical protein (TIGR) compare
DVU2202 +0.6 3.0 transglycosylase SLT domain/bacterial extracellular solute-binding domain protein (TIGR) compare
DVU0745 +0.6 3.2 ABC transporter, periplasmic substrate-binding protein (TIGR) compare
DVU1447 +0.6 3.4 CgeB family protein (TIGR) compare
DVU1777 cynT +0.6 0.5 carbonic anhydrase (TIGR) compare
DVU1380 +0.6 1.7 hypothetical protein (TIGR) compare
DVU3325 +0.6 1.0 hypothetical protein (TIGR) compare
DVU0014 infA-1 +0.6 1.2 translation initiation factor IF-1 (TIGR) compare
DVU1226 +0.6 1.5 hypothetical protein (TIGR) compare
DVU2081 +0.6 0.8 hypothetical protein (TIGR) compare
DVU1369 +0.6 1.4 hypothetical protein (TIGR) compare
DVU1679 idi +0.6 1.3 isopentenyl-diphosphate delta-isomerase (TIGR) compare
DVU0747 cysA +0.6 2.3 ABC transporter, ATP-binding protein (TIGR) compare
DVU2198 +0.6 0.3 hypothetical protein (TIGR) compare
DORF32294 +0.6 2.0 no description compare
DVUA0141 +0.6 2.7 hypothetical protein (TIGR) compare
DVU0315 flgC +0.6 3.5 flagellar basal-body rod protein FlgC (TIGR) compare
DVU1247 +0.6 1.8 hypothetical protein (TIGR) compare
DVU3028 +0.6 3.3 iron-sulfur cluster-binding protein (TIGR) compare
DVU0215 +0.6 3.7 tail protein, putative (TIGR) compare
DVU0016 +0.6 0.4 hypothetical protein (TIGR) compare
DVU2391 +0.6 0.4 hypothetical protein (TIGR) compare
DVU1137 +0.5 3.2 hypothetical protein (TIGR) compare
DVU2514 pyk +0.5 3.1 pyruvate kinase (TIGR) compare
DVU2478 pstC-2 +0.5 3.1 phosphate ABC transporter, permease protein, putative (TIGR) compare
DVU2682 +0.5 1.3 DedA family protein (TIGR) compare
DVU1704 +0.5 0.4 conserved hypothetical protein (TIGR) compare
DVUA0144 +0.5 1.3 hypothetical protein (TIGR) compare
DVU1127 +0.5 3.3 hypothetical protein (TIGR) compare
DVU1962 +0.5 3.6 methyl-accepting chemotaxis protein (TIGR) compare
DVU0909 +0.5 1.8 hypothetical protein (TIGR) compare
DVU2231 typA +0.5 3.2 GTP-binding protein TypA (TIGR) compare
DVU1026 uraA +0.5 3.4 uracil permease (TIGR) compare
DVU2444 flaB3 +0.5 1.5 flagellin (TIGR) compare
DVU0295 +0.5 3.3 amine oxidase, flavin-containing (TIGR) compare
DVU1960 cheA-2 +0.5 3.6 chemotaxis protein CheA (TIGR) compare
DVU1421 +0.5 1.2 hypothetical protein (TIGR) compare
DVU1274 +0.5 1.8 hypothetical protein (TIGR) compare
DVU0755 +0.5 3.1 sensor histidine kinase, putative (TIGR) compare
DVU0165 oppF +0.5 2.6 oligopeptide/dipeptide ABC transporter, ATP-binding protein (TIGR) compare
DVU1242 vacJhomolog +0.5 0.5 vacJ lipoprotein, putative (TIGR) compare
DVU3027 glcD +0.5 1.8 glycolate oxidase, subunit GlcD (TIGR) compare
DVU1268 +0.5 2.3 hypothetical protein (TIGR) compare
DVU0302 +0.5 1.7 chemotaxis protein CheX, putative (TIGR) compare
DVUA0092 +0.5 2.5 hypothetical protein (TIGR) compare
DVU1455 +0.5 0.7 conserved hypothetical protein (TIGR) compare
DVU1875 +0.5 1.6 dafA protein (TIGR) compare
DORF10920 +0.5 1.2 no description compare
DVU1082 +0.5 2.7 3- 5 exonuclease domain protein (TIGR) compare
DVU1458 +0.5 2.5 chemotaxis protein CheZ, putative (TIGR) compare
DVU2677 +0.5 2.1 sensor histidine kinase/response regulator (TIGR) compare
DVU2283 +0.5 1.1 hypothetical protein (TIGR) compare
DVU1695 +0.5 1.8 tail fiber assembly protein, putative (TIGR) compare
DVU1335 clpP +0.5 1.2 ATP-dependent Clp protease, proteolytic subunit (TIGR) compare
DVU1162 +0.5 0.8 hypothetical protein (TIGR) compare
DVU0862 +0.5 2.6 flagellar protein FliS/hypothetical protein, fusion (TIGR) compare
DVU2644 +0.5 1.2 transcriptional regulator, GntR family (TIGR) compare
DORF47110 +0.5 1.4 no description compare
DVU1408 +0.5 1.9 hypothetical protein (TIGR) compare
DVU0272 +0.5 1.8 hypothetical protein (TIGR) compare
DVU2498 +0.5 1.5 hypothetical protein (TIGR) compare
DVU1799 fusA-2 +0.5 2.2 translation elongation factor G (TIGR) compare
DVU0763 gdp +0.5 3.1 GGDEF domain protein (TIGR) compare
DVU0410 +0.5 2.1 hypothetical protein (TIGR) compare
DVU0042 +0.5 2.3 RNA methyltransferase, TrmH family, group 3 (TIGR) compare
DVU2829 +0.5 1.9 hypothetical protein (TIGR) compare
DVU1275 +0.5 1.7 hypothetical protein (TIGR) compare
DVU0077 +0.5 3.1 conserved hypothetical protein (TIGR) compare
DVU0934 +0.5 1.6 hypothetical protein (TIGR) compare
DVU1129 +0.5 2.4 conserved hypothetical protein (TIGR) compare
DVU0168 +0.5 3.4 oligopeptide/dipeptide ABC transporter, permease protein (TIGR) compare
DVU3066 +0.5 2.1 DNA-binding protein (TIGR) compare
DVU1507 +0.5 1.1 hypothetical protein (TIGR) compare
DVU0858 +0.5 2.5 lipoprotein, putative (TIGR) compare
DVU0275 +0.5 2.2 polysaccharide deacetylase family protein (TIGR) compare
DVUA0109 +0.4 1.9 type III secretion system chaperone, LcrH/SycD family (TIGR) compare
DVU2475 +0.4 2.8 oxidoreductase, NAD-binding, putative (TIGR) compare
DVU2243 glgB +0.4 2.6 1,4-alpha-glucan branching enzyme (TIGR) compare


Specific Phenotypes

For 30 genes in this experiment

For nutrient L-Cysteine in Desulfovibrio vulgaris Hildenborough JW710

For nutrient L-Cysteine across organisms