Experiment set15IT024 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

MOLS with alpha-ketoglutaric acid 2.5mM as nutrient

200 most detrimental genes:

  gene name fitness t score description  
DVU1682 +1.4 3.9 GAF domain protein (TIGR) compare
DVU1420 +1.2 1.3 Hpt domain protein (TIGR) compare
DVU2957 +1.1 0.6 hypothetical protein (TIGR) compare
DVU0300 +1.1 0.5 radical SAM domain protein (TIGR) compare
DVU2048 +1.1 0.4 hypothetical protein (TIGR) compare
DVU3175 +1.0 1.7 membrane protein, putative (TIGR) compare
DVU1436 +1.0 0.6 hypothetical protein (TIGR) compare
DVU0965 +1.0 0.6 hypothetical protein (TIGR) compare
DVU1520 +1.0 0.6 hypothetical protein (TIGR) compare
DVU1726 +1.0 1.4 hypothetical protein (TIGR) compare
DVU2172 +1.0 2.2 hypothetical protein (TIGR) compare
DVU2669 +0.9 2.2 conserved domain protein (TIGR) compare
DVU1360 galE +0.9 0.8 UDP-glucose 4-epimerase (TIGR) compare
DVU2473 +0.9 0.6 hypothetical protein (TIGR) compare
DVU0008 +0.9 0.5 hypothetical protein (TIGR) compare
DORF8192 +0.9 1.8 SEED: FIG00606834: hypothetical protein compare
DVU2703 +0.9 0.6 hypothetical protein (TIGR) compare
DVU2046 +0.9 0.6 hypothetical protein (TIGR) compare
DVU1704 +0.9 0.6 conserved hypothetical protein (TIGR) compare
DVUA0071 +0.9 1.2 glycosyl transferase, group 1/2 family protein (TIGR) compare
DVU1679 idi +0.9 1.7 isopentenyl-diphosphate delta-isomerase (TIGR) compare
DVU1612 +0.9 3.8 ACT domain protein (TIGR) compare
DVU0257 +0.8 1.1 acetyltransferase, GNAT family (TIGR) compare
DVU0034 +0.8 4.8 DSBA-like thioredoxin domain protein (TIGR) compare
DVU2915 +0.8 1.5 hypothetical protein (TIGR) compare
DVU1251 +0.8 1.9 hypothetical protein (TIGR) compare
DVU1464 +0.8 6.0 heptosyltransferase family protein (TIGR) compare
DVU1409 +0.8 3.2 hypothetical protein (TIGR) compare
DVU1629 yfiA +0.8 3.5 ribosomal subunit interface protein (TIGR) compare
DVU0047 +0.8 3.8 flagellar protein FliL (TIGR) compare
DVU2510 +0.8 0.4 penicillin-binding protein (TIGR) compare
DVU3177 +0.8 3.4 hypothetical protein (TIGR) compare
DVU0016 +0.7 0.5 hypothetical protein (TIGR) compare
DVU0618 +0.7 0.5 hypothetical protein (TIGR) compare
DVU2067 +0.7 1.7 GGDEF domain protein (TIGR) compare
DVU1862 +0.7 3.6 GGDEF domain protein (TIGR) compare
DVU0410 +0.7 4.4 hypothetical protein (TIGR) compare
DVU1154 +0.7 0.5 hypothetical protein (TIGR) compare
DVU1748 +0.7 0.3 conserved hypothetical protein (TIGR) compare
DVU1842 +0.7 0.8 lipoprotein, putative (TIGR) compare
DVU0046 fliN +0.7 3.7 flagellar motor switch protein FliN (TIGR) compare
DVU2831 +0.7 1.6 hypothetical protein (TIGR) compare
DVU0311 +0.7 2.5 flagellar assembly protein FliH, putative (TIGR) compare
DVU1777 cynT +0.7 0.5 carbonic anhydrase (TIGR) compare
DVU0063 +0.7 1.3 transcriptional regulator, MarR family (TIGR) compare
DVU2024 +0.7 5.2 conserved hypothetical protein (TIGR) compare
DVU0512 flgF +0.7 3.0 flagellar basal-body rod protein, putative (TIGR) compare
DVU0001 dnaA-1 +0.7 1.8 chromosomal replication initiator protein DnaA (TIGR) compare
DVU3234 +0.6 3.2 flagellar biosynthetic protein FliR (TIGR) compare
DVU3117 +0.6 1.5 hypothetical protein (TIGR) compare
DVU3311 +0.6 1.7 hypothetical protein (TIGR) compare
DVU2300 +0.6 0.4 hypothetical protein (TIGR) compare
DVU1104 +0.6 3.2 baseplate assembly protein, putative (TIGR) compare
DVU1263 pppA +0.6 3.0 type IV prepilin-like proteins leader peptidase (TIGR) compare
DVU0318 +0.6 1.6 TPR domain protein (TIGR) compare
DVU1443 flgE +0.6 3.1 flagellar hook protein FlgE (TIGR) compare
DVU1955 +0.6 3.6 TPR domain protein (TIGR) compare
DVU1855 +0.6 2.3 integrase, truncation (TIGR) compare
DVU0314 fliE +0.6 2.4 flagellar basal body component FliE (TIGR) compare
DVU1170 +0.6 0.5 hypothetical protein (TIGR) compare
DVU0359 +0.6 2.2 HesB-like domain (TIGR) compare
DVU0186 +0.6 2.6 conserved hypothetical protein (TIGR) compare
DVUA0080 +0.6 0.4 glycosyl transferase, group 2 family protein (TIGR) compare
DVU1363 rfbD +0.6 2.1 dTDP-4-dehydrorhamnose reductase (TIGR) compare
DVU3232 flhA +0.6 4.7 flagellar biosynthetic protein FlhA (TIGR) compare
DVU0045 +0.6 3.7 flagellar biosynthesis protein, FliO, putative (TIGR) compare
DORF10286 +0.6 2.7 no description compare
DVU0232 +0.6 0.6 hypothetical protein (TIGR) compare
DVU2961 +0.6 3.2 hypothetical protein (TIGR) compare
DVU2674 sdhB +0.6 2.0 succinate dehydrogenase and fumarate reductase iron-sulfur protein (TIGR) compare
DVU0376 +0.6 0.7 hypothetical protein (TIGR) compare
DVU1567 +0.6 1.7 hypothetical protein (TIGR) compare
DORF25031 +0.6 1.0 SEED: FIG00606465: hypothetical protein compare
DVU0522 yviF +0.6 2.8 conserved hypothetical protein (TIGR) compare
DORF43335 +0.6 0.5 no description compare
DVUA0146 +0.6 2.4 hypothetical protein (TIGR) compare
DVU3260 +0.6 1.3 hypothetical protein (TIGR) compare
DVU1996 +0.6 2.8 quaternary ammonium compound-resistance protein QacC, putative (TIGR) compare
DVU2867 +0.5 0.6 holin (TIGR) compare
DVU1851 +0.5 2.4 peptidase, M23/M37 family (TIGR) compare
DVU0859 +0.5 3.6 hypothetical protein (TIGR) compare
DVU1695 +0.5 1.8 tail fiber assembly protein, putative (TIGR) compare
DVU0024 +0.5 0.5 conserved hypothetical protein (TIGR) compare
DVU0514 +0.5 2.1 FlgA family protein (TIGR) compare
DVU1142 +0.5 1.2 transcriptional regulator, putative (TIGR) compare
DVU3229 fliA +0.5 2.2 RNA polymerase sigma factor for flagellar operon FliA (TIGR) compare
DVU2853 +0.5 2.1 phage baseplate assembly protein V, putative (TIGR) compare
DVU2090 +0.5 2.3 EF hand domain protein (TIGR) compare
DVU1268 +0.5 1.4 hypothetical protein (TIGR) compare
DVU2894 flrA +0.5 2.6 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU2794 +0.5 2.2 NADH:quinone oxidoreductase subunit RnfG (Shelley Haveman) compare
DVU2391 +0.5 0.3 hypothetical protein (TIGR) compare
DVU2550 +0.5 0.5 hypothetical protein (TIGR) compare
DVU0833 +0.5 2.2 conserved hypothetical protein TIGR00252 (TIGR) compare
DVU1593 cheY-1 +0.5 1.5 chemotaxis protein CheY (TIGR) compare
DVU2303 +0.5 1.2 conserved domain protein (TIGR) compare
DVU1604 +0.5 2.6 hypothetical protein (TIGR) compare
DVU1588 hpt +0.5 1.3 hypoxanthine phosphoribosyltransferase (TIGR) compare
DORF13021 +0.5 0.8 no description compare
DVU1187 +0.5 2.1 hypothetical protein (TIGR) compare
DVU1084 pstB-1 +0.5 3.5 phosphate ABC transporter, ATP-binding protein (TIGR) compare
DVU0206 +0.5 1.0 hypothetical protein (TIGR) compare
DVU0227 +0.5 1.1 conserved hypothetical protein (TIGR) compare
DVU2063 +0.5 1.2 conserved hypothetical protein (TIGR) compare
DVU1705 +0.5 1.4 type I restriction-modification enzyme, S subunit (TIGR) compare
DVU0400 +0.5 2.4 hypothetical protein (TIGR) compare
DVU1850 +0.5 0.7 CBS domain protein (TIGR) compare
DVU2624 +0.5 1.8 hypothetical protein (TIGR) compare
DVU0295 +0.5 3.1 amine oxidase, flavin-containing (TIGR) compare
DVU1859 +0.5 1.3 hypothetical protein (TIGR) compare
DVU2070 +0.5 1.7 TPR domain protein (TIGR) compare
DVU0293 +0.5 1.3 prokaryotic dksA/traR C4-type zinc finger family protein (TIGR) compare
DORF10920 +0.5 1.1 no description compare
DVU0097 potB +0.5 1.8 polyamine ABC transporter, permease protein (TIGR) compare
DVU1193 radC +0.5 1.1 DNA repair protein RadC (TIGR) compare
DVU3139 +0.5 0.9 bacterial extracellular solute-binding protein, family 3 (TIGR) compare
DVU0205 +0.5 0.9 hypothetical protein (TIGR) compare
DVU1133 +0.5 1.0 hypothetical protein (TIGR) compare
DVU2411 +0.5 1.9 EF hand domain protein (TIGR) compare
DVU2112 +0.5 2.7 hypothetical protein (TIGR) compare
DVU2847 +0.5 1.3 hypothetical protein (TIGR) compare
DVU0307 +0.5 2.6 flagella basal body rod domain protein (TIGR) compare
DORF10632 +0.5 1.9 SEED: FIG00602944: hypothetical protein compare
DVU0382 +0.5 1.8 hypothetical protein (TIGR) compare
DORF768 +0.5 2.7 no description compare
DVU2023 +0.5 2.3 hypothetical protein (TIGR) compare
DVU0764 hup-2 +0.5 1.1 DNA-binding protein HU (TIGR) compare
DVU1114 +0.5 2.1 virion morphogenesis protein (TIGR) compare
DVU0507 +0.5 0.6 conserved hypothetical protein (TIGR) compare
DVU2495 +0.5 0.6 thioesterase family protein (TIGR) compare
DVU2846 +0.5 0.7 hypothetical protein (TIGR) compare
DVU2909 +0.5 2.4 transcriptional regulator, MarR family (TIGR) compare
DVU0219 +0.5 0.8 tail protein, putative (TIGR) compare
DVU2871 +0.4 1.3 minor capsid protein C (TIGR) compare
DVU1088 +0.4 0.8 hypothetical protein (TIGR) compare
DVU1175 +0.4 0.6 hypothetical protein (TIGR) compare
DVU2307 +0.4 1.8 C4-type zinc finger protein, DksA/TraR family (TIGR) compare
DVU3022 +0.4 0.2 sensory box histidine kinase/response regulator (TIGR) compare
DVU0298 +0.4 1.9 hypothetical protein (TIGR) compare
DVU1670 +0.4 2.0 conserved hypothetical protein (TIGR) compare
DVU1070 rbsA +0.4 2.1 branched chain amino acid ABC transporter, ATP-binding protein (TIGR) compare
DVU1408 +0.4 1.4 hypothetical protein (TIGR) compare
DVU2607 +0.4 2.1 hypothetical protein (TIGR) compare
DVU3233 flhB +0.4 2.8 flagellar biosynthetic protein FlhB (TIGR) compare
DVU1085 phoU +0.4 2.9 phosphate transport system protein PhoU (TIGR) compare
DVU1445 +0.4 2.0 flagellar hook-length control domain protein (TIGR) compare
DVU0951 moeA-2 +0.4 1.4 molybdopterin biosynthesis MoeA protein, putative (TIGR) compare
DVU1338 +0.4 0.9 conserved hypothetical protein (TIGR) compare
DVU1272 gspE +0.4 2.7 general secretion pathway protein E, putative (TIGR) compare
DVU1621 +0.4 0.3 hypothetical protein (TIGR) compare
DVUA0074 +0.4 1.7 sulfotransferase family protein (TIGR) compare
DVU0310 fliI +0.4 2.6 flagellum-specific ATP synthase FliI (TIGR) compare
DVU1099 +0.4 1.9 tail fiber assembly protein, putative (TIGR) compare
DVU1158 +0.4 0.3 hypothetical protein (TIGR) compare
DVU1766 aspA +0.4 2.3 aspartate ammonia-lyase, putative (TIGR) compare
DVU2777 +0.4 1.8 hypothetical protein (TIGR) compare
DVU1276 +0.4 2.5 hypothetical protein (TIGR) compare
DVU3287 +0.4 2.6 glycosyl transferase, group 2 family protein (TIGR) compare
DVU0043 fliQ +0.4 1.1 flagellar biosynthetic protein FliQ (TIGR) compare
DVU0163 +0.4 1.6 lipoprotein, putative (TIGR) compare
DVU1262 pilT-1 +0.4 1.6 twitching motility protein PilT (TIGR) compare
DVU1264 +0.4 1.7 transglycosylase SLT domain protein (TIGR) compare
DVU1556 +0.4 1.3 conserved domain protein (TIGR) compare
DVU0669 +0.4 0.8 hypothetical protein (TIGR) compare
DVU0044 fliP +0.4 2.5 flagellar biosynthetic protein fliP (TIGR) compare
DVU0204 +0.4 1.3 lipoprotein, putative (TIGR) compare
DVU1449 +0.4 1.3 anti-anti-sigma factor, putative (TIGR) compare
DVU1875 +0.4 1.4 dafA protein (TIGR) compare
DORF10446 +0.4 1.5 SEED: FIG00604570: hypothetical protein compare
DVU0519 +0.4 2.8 flagellar hook-associated protein FlgK, putative (TIGR) compare
DVU1034 +0.4 1.8 hypothetical protein (TIGR) compare
DVU0035 +0.4 1.0 hypothetical protein (TIGR) compare
DVU1944 oorD +0.4 0.8 pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative (TIGR) compare
DVU3200 recR +0.4 2.1 recombination protein RecR (TIGR) compare
DVU3302 +0.4 1.0 hypothetical protein (TIGR) compare
DVU1265 +0.4 1.6 hypothetical protein (TIGR) compare
DVU0829 ptsI +0.4 1.7 phosphoenolpyruvate-protein phosphotransferase (TIGR) compare
DVU0726 tgt +0.4 2.6 queuine tRNA-ribosyltransferase (TIGR) compare
DVU0910 fliM +0.4 1.9 flagellar motor switch protein FliM (TIGR) compare
DVU1103 +0.4 1.6 baseplate assembly protein, putative (TIGR) compare
DVU2115 +0.4 0.4 hypothetical protein (TIGR) compare
DORF702 +0.4 0.7 no description compare
DVU2843 vsr +0.4 1.6 DNA mismatch endonuclease Vsr, putative (TIGR) compare
DVU0979 b1200 +0.4 1.7 DAK1 domain protein (TIGR) compare
DVU3329 +0.4 2.3 hypothetical protein (TIGR) compare
DVU0989 +0.4 2.1 periplasmic divalent cation tolerance protein cutA, putative (TIGR) compare
DVU2099 cooC-2 +0.4 1.2 carbon monoxide dehydrogenase accessory protein CooC, putative (TIGR) compare
DVU0858 +0.4 1.5 lipoprotein, putative (TIGR) compare
DVU3360 parB +0.4 2.0 ParB family protein (TIGR) compare
DVU1762 +0.4 1.0 membrane protein, putative (TIGR) compare
DVU1702 +0.4 1.4 conserved hypothetical protein (TIGR) compare
DVU0711 +0.4 1.8 hypothetical protein (TIGR) compare
DVU1127 +0.4 1.9 hypothetical protein (TIGR) compare
DVU0926 +0.4 1.3 hypothetical protein (TIGR) compare
DVU3118 +0.4 1.1 conserved hypothetical protein (TIGR) compare
DVU0250 +0.4 0.9 hypothetical protein (TIGR) compare
DVU2147 sda +0.4 2.2 L-serine dehydratase, putative (TIGR) compare
DVU3289 +0.4 0.9 hypothetical protein (TIGR) compare
DVU1123 +0.4 1.6 conserved domain protein (TIGR) compare
DVU2111 +0.4 2.3 transcriptional regulator, LysR family (TIGR) compare


Specific Phenotypes

None in this experiment

For Desulfovibrio vulgaris Hildenborough JW710 in nutrient experiments

For nutrient a-Ketoglutaric acid disodium salt hydrate across organisms