Experiment set15H22 for Pseudomonas stutzeri RCH2

Compare to:

LB with 2-Furfuraldehyde 0.05 vol%

200 most important genes:

  gene name fitness t score description  
Psest_1463 -5.4 -1.0 SufE protein probably involved in Fe-S center assembly compare
Psest_4078 -4.9 -2.3 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D compare
Psest_2491 -4.6 -8.2 succinyl-CoA synthetase, beta subunit compare
Psest_1656 -4.2 -2.3 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit compare
Psest_1657 -3.8 -1.8 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit compare
Psest_3113 -3.6 -2.1 electron transport complex, RnfABCDGE type, B subunit compare
Psest_1663 -3.5 -4.3 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes compare
Psest_2945 -3.3 -1.4 septum site-determining protein MinC compare
Psest_0958 -3.3 -5.9 Oligoketide cyclase/lipid transport protein compare
Psest_2527 -3.2 -7.4 cytochrome c oxidase, cbb3-type, subunit I compare
Psest_0466 -3.2 -6.1 Lipopolysaccharide kinase (Kdo/WaaP) family. compare
Psest_3338 -3.1 -1.7 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain compare
Psest_2490 -3.1 -11.3 succinyl-CoA synthetase, alpha subunit compare
Psest_2025 -2.8 -1.1 cold shock domain protein CspD compare
Psest_0309 -2.8 -1.2 RND family efflux transporter, MFP subunit compare
Psest_1655 -2.7 -5.1 NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit compare
Psest_1824 -2.6 -3.7 Sugar transferases involved in lipopolysaccharide synthesis compare
Psest_1496 -2.6 -1.2 Holliday junction DNA helicase, RuvA subunit compare
Psest_1661 -2.6 -1.7 Membrane-associated lipoprotein involved in thiamine biosynthesis compare
Psest_2726 -2.6 -1.7 Rhodanese-related sulfurtransferase compare
Psest_3546 -2.5 -1.5 Phosphatidylglycerophosphatase A and related proteins compare
Psest_2104 -2.5 -1.5 IscR-regulated protein YhgI compare
Psest_1295 -2.4 -4.6 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_1505 -2.4 -2.2 Organic radical activating enzymes compare
Psest_1518 -2.4 -2.5 tRNA_Ser_CGA compare
Psest_2243 -2.4 -1.4 glyceraldehyde-3-phosphate dehydrogenase, type I compare
Psest_0722 -2.3 -8.0 Predicted ATPase compare
Psest_3045 -2.3 -1.9 Cold shock proteins compare
Psest_2756 -2.3 -1.3 hypothetical protein compare
Psest_3803 -2.2 -1.4 DNA repair protein radc compare
Psest_0489 -2.2 -1.5 phosphoserine phosphatase SerB compare
Psest_1704 -2.2 -1.2 Dehydrogenases (flavoproteins) compare
Psest_1456 -2.1 -4.4 Protein of unknown function (DUF2892). compare
Psest_3159 -2.1 -5.8 phosphoribosylformylglycinamidine synthase, single chain form compare
Psest_0212 -2.1 -2.0 exodeoxyribonuclease V, gamma subunit compare
Psest_0028 -2.0 -3.4 Coproporphyrinogen III oxidase compare
Psest_2067 -2.0 -1.6 ABC-type oligopeptide transport system, periplasmic component compare
Psest_2530 -2.0 -5.2 cytochrome c oxidase, cbb3-type, subunit III compare
Psest_3790 -2.0 -8.8 Cytochrome c5 compare
Psest_2023 -1.9 -3.0 isocitrate dehydrogenase, NADP-dependent, monomeric type compare
Psest_3937 -1.9 -2.1 ATP-dependent protease HslVU, ATPase subunit compare
Psest_1888 -1.9 -1.0 Sua5/YciO/YrdC/YwlC family protein compare
Psest_0417 -1.9 -1.8 Acyl-CoA dehydrogenases compare
Psest_3908 -1.9 -1.2 Cytochrome c553 compare
Psest_2240 -1.9 -1.6 hypothetical protein compare
Psest_1804 -1.8 -1.7 Superfamily II DNA and RNA helicases compare
Psest_0969 -1.7 -1.5 transcription elongation factor GreA compare
Psest_2714 -1.7 -1.9 7-cyano-7-deazaguanine reductase compare
Psest_2018 -1.7 -2.1 Uncharacterized conserved protein compare
Psest_1506 -1.7 -4.4 queuosine biosynthesis protein QueC compare
Psest_1474 -1.7 -3.5 phosphoribosylaminoimidazole synthetase compare
Psest_2809 -1.6 -3.2 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psest_3853 -1.6 -2.6 ABC-type branched-chain amino acid transport systems, ATPase component compare
Psest_1480 -1.6 -2.6 arsenate reductase (glutaredoxin) compare
Psest_3927 -1.6 -3.3 thiazole biosynthesis/tRNA modification protein ThiI compare
Psest_1920 -1.5 -0.8 Uncharacterized protein conserved in bacteria compare
Psest_4044 -1.5 -2.9 type I site-specific deoxyribonuclease, HsdR family compare
Psest_1814 -1.5 -9.4 pseudaminic acid biosynthesis N-acetyl transferase compare
Psest_0678 -1.5 -2.4 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region compare
Psest_3816 -1.5 -1.0 DNA-directed RNA polymerase, omega subunit compare
Psest_4325 -1.5 -2.3 hypothetical protein compare
Psest_2579 -1.5 -4.8 amidophosphoribosyltransferase compare
Psest_2872 -1.5 -1.4 protein RecA compare
Psest_3114 -1.5 -6.0 electron transport complex, RnfABCDGE type, C subunit compare
Psest_3145 -1.5 -1.2 hypothetical protein compare
Psest_3129 -1.5 -1.0 tyrosine recombinase XerD compare
Psest_0170 -1.4 -4.6 5,10-methenyltetrahydrofolate synthetase compare
Psest_2923 -1.4 -1.4 hypothetical protein compare
Psest_2637 -1.4 -1.0 putative methyltransferase, YaeB/AF_0241 family compare
Psest_2719 -1.4 -2.0 acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family compare
Psest_2532 -1.4 -2.1 Uncharacterized protein conserved in bacteria compare
Psest_4274 -1.4 -1.8 hypothetical protein compare
Psest_3112 -1.3 -3.2 electron transport complex, RnfABCDGE type, A subunit compare
Psest_2122 -1.3 -1.0 Parvulin-like peptidyl-prolyl isomerase compare
Psest_2775 -1.3 -2.6 Glycerol-3-phosphate dehydrogenase compare
Psest_1349 -1.3 -1.6 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) compare
Psest_3042 -1.3 -1.0 Nitrate reductase cytochrome c-type subunit compare
Psest_2976 -1.3 -1.2 hypothetical protein compare
Psest_1179 -1.3 -1.3 2-hydroxy-3-oxopropionate reductase compare
Psest_0558 -1.3 -0.7 urease, beta subunit compare
Psest_1199 -1.3 -3.4 OHCU decarboxylase compare
Psest_3960 -1.3 -0.9 3'(2'),5'-bisphosphate nucleotidase, bacterial compare
Psest_3490 -1.3 -2.0 Signal transduction histidine kinase, nitrate/nitrite-specific compare
Psest_1013 -1.2 -2.5 phosphoribosylamine--glycine ligase compare
Psest_0442 -1.2 -2.1 ATPases of the AAA+ class compare
Psest_2757 -1.2 -0.8 hypothetical protein compare
Psest_0401 -1.2 -1.4 isopentenyl-diphosphate delta-isomerase, type 2 compare
Psest_1665 -1.2 -2.7 hypothetical protein compare
Psest_0243 -1.2 -1.1 hypothetical protein compare
Psest_1524 -1.2 -2.3 Sel1 repeat. compare
Psest_2173 -1.2 -3.3 competence/damage-inducible protein CinA C-terminal domain compare
Psest_0449 -1.2 -6.4 Glutamine synthetase adenylyltransferase compare
Psest_3303 -1.2 -3.4 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) compare
Psest_4067 -1.2 -2.3 Predicted membrane protein compare
Psest_4298 -1.1 -0.6 Response regulator containing a CheY-like receiver domain and a GGDEF domain compare
Psest_3123 -1.1 -0.8 dihydroorotase, homodimeric type compare
Psest_1166 -1.1 -1.0 transcriptional regulator, ArgP family compare
Psest_0083 -1.1 -1.8 Uncharacterized conserved protein compare
Psest_2229 -1.1 -1.4 Uncharacterized protein conserved in bacteria compare
Psest_0782 -1.1 -4.4 Transcriptional regulator of aromatic amino acids metabolism compare
Psest_0501 -1.1 -2.0 Predicted nucleoside-diphosphate-sugar epimerases compare
Psest_4151 -1.1 -2.0 Flagellar hook capping protein compare
Psest_3237 -1.1 -1.0 hypothetical protein compare
Psest_3828 -1.1 -0.7 zinc-binding alcohol dehydrogenase family protein compare
Psest_3398 -1.1 -2.5 large conductance mechanosensitive channel protein compare
Psest_3910 -1.1 -1.0 Uncharacterized protein conserved in bacteria compare
Psest_2651 -1.1 -2.2 DNA topoisomerase I, bacterial compare
Psest_0503 -1.1 -1.2 Acyl dehydratase compare
Psest_4241 -1.1 -3.1 hypothetical protein compare
Psest_4177 -1.1 -1.1 flagellar biosynthetic protein FliP compare
Psest_2545 -1.1 -1.9 recombination protein RecR compare
Psest_1327 -1.1 -6.0 Superfamily II DNA/RNA helicases, SNF2 family compare
Psest_2594 -1.1 -1.4 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_0376 -1.1 -2.2 glucarate dehydratase compare
Psest_3832 -1.1 -1.3 hypothetical protein compare
Psest_2956 -1.1 -2.8 Uncharacterized conserved protein compare
Psest_0771 -1.1 -5.5 Acyl-CoA hydrolase compare
Psest_4310 -1.1 -0.9 ABC-type Mn2+/Zn2+ transport systems, permease components compare
Psest_2743 -1.1 -2.3 Methylase involved in ubiquinone/menaquinone biosynthesis compare
Psest_3226 -1.1 -0.6 Predicted membrane protein compare
Psest_0498 -1.1 -0.8 ribosome small subunit-dependent GTPase A compare
Psest_1215 -1.1 -1.7 Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) compare
Psest_4057 -1.1 -3.4 Peroxiredoxin compare
Psest_3190 -1.1 -3.5 pyruvate kinase compare
Psest_3884 -1.0 -0.7 Signal transduction histidine kinase compare
Psest_0165 -1.0 -2.1 protein-export chaperone SecB compare
Psest_1782 -1.0 -1.3 Predicted transcriptional regulators compare
Psest_1562 -1.0 -1.0 Uncharacterized protein conserved in bacteria compare
Psest_1195 -1.0 -1.6 xanthine permease compare
Psest_1249 -1.0 -3.8 serine O-acetyltransferase compare
Psest_4319 -1.0 -2.7 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily compare
Psest_3178 -1.0 -1.9 formyltetrahydrofolate deformylase compare
Psest_1012 -1.0 -2.1 Signal transduction histidine kinase compare
Psest_1408 -1.0 -3.5 Predicted unusual protein kinase compare
Psest_2037 -1.0 -2.9 uroporphyrin-III C-methyltransferase compare
Psest_4287 -1.0 -3.0 Predicted glutamine amidotransferases compare
Psest_3351 -1.0 -3.4 peptide chain release factor 3 compare
Psest_0737 -1.0 -0.6 Cu(I)-responsive transcriptional regulator compare
Psest_3736 -1.0 -1.6 Uncharacterized protein conserved in bacteria compare
Psest_3850 -1.0 -0.4 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_1532 -1.0 -1.6 DNA recombination-dependent growth factor C compare
Psest_3022 -1.0 -2.9 Predicted membrane protein compare
Psest_3212 -1.0 -2.1 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Psest_2612 -0.9 -2.5 hypothetical protein compare
Psest_1997 -0.9 -1.4 6-phosphogluconolactonase compare
Psest_3070 -0.9 -1.2 3-oxoadipyl-CoA thiolase compare
Psest_3115 -0.9 -3.1 electron transport complex, RnfABCDGE type, D subunit compare
Psest_1601 -0.9 -1.3 Signal transduction histidine kinase compare
Psest_3307 -0.9 -3.3 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Psest_1317 -0.9 -2.5 phosphonate ABC transporter, permease protein PhnE compare
Psest_0510 -0.9 -2.4 iojap-like ribosome-associated protein compare
Psest_3735 -0.9 -1.1 uncharacterized domain 1 compare
Psest_3304 -0.9 -3.2 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Psest_1372 -0.9 -2.6 Methyl-accepting chemotaxis protein compare
Psest_3795 -0.9 -3.6 Glycine/D-amino acid oxidases (deaminating) compare
Psest_3904 -0.9 -1.0 hypothetical protein compare
Psest_2285 -0.9 -2.2 ATP-dependent protease La compare
Psest_3998 -0.9 -3.6 glutamate--cysteine ligase compare
Psest_3177 -0.9 -1.2 hypothetical protein compare
Psest_4191 -0.9 -1.7 Transcriptional regulator compare
Psest_1878 -0.9 -1.6 Uncharacterized protein conserved in bacteria compare
Psest_3871 -0.9 -2.2 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) compare
Psest_3361 -0.9 -2.8 Uncharacterized protein conserved in bacteria compare
Psest_1424 -0.9 -1.6 Lipoate-protein ligase A compare
Psest_0275 -0.9 -1.6 Protein of unknown function (DUF3392). compare
Psest_3048 -0.9 -1.7 hypothetical protein compare
Psest_3697 -0.9 -1.2 Outer membrane lipoprotein carrier protein LolA. compare
Psest_1527 -0.9 -4.6 Na+/proline symporter compare
Psest_0547 -0.9 -2.5 Urease accessory protein UreF compare
Psest_3306 -0.9 -2.0 conserved hypothetical integral membrane protein compare
Psest_1819 -0.9 -6.5 Nucleoside-diphosphate-sugar epimerases compare
Psest_1752 -0.9 -0.9 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB compare
Psest_1813 -0.9 -4.5 pseudaminic acid biosynthesis-associated protein PseG compare
Psest_4209 -0.9 -1.4 Uncharacterized conserved small protein compare
Psest_2225 -0.9 -1.5 Diacylglycerol kinase compare
Psest_3350 -0.9 -5.1 Diaminopimelate decarboxylase compare
Psest_3767 -0.9 -2.0 tyrosine recombinase XerC compare
Psest_1073 -0.9 -2.0 TRAP-type mannitol/chloroaromatic compound transport system, small permease component compare
Psest_1242 -0.9 -1.2 tRNA-guanine transglycosylase, queuosine-34-forming compare
Psest_3480 -0.9 -1.4 molybdenum cofactor biosynthesis protein B, proteobacterial compare
Psest_0320 -0.9 -2.4 ABC-type multidrug transport system, ATPase component compare
Psest_0134 -0.9 -2.1 type VI secretion-associated protein, VC_A0119 family compare
Psest_3174 -0.9 -5.2 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
Psest_2239 -0.9 -1.8 RES domain. compare
Psest_2738 -0.8 -3.7 hypothetical protein compare
Psest_3838 -0.8 -1.6 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol compare
Psest_0757 -0.8 -2.5 hypothetical protein compare
Psest_2232 -0.8 -5.7 UTP-glucose-1-phosphate uridylyltransferase compare
Psest_0511 -0.8 -0.8 rRNA large subunit m3Psi methyltransferase RlmH compare
Psest_1602 -0.8 -0.9 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_2626 -0.8 -1.6 Flp pilus assembly protein CpaB compare
Psest_3690 -0.8 -2.4 Acyl carrier protein compare
Psest_1999 -0.8 -0.7 pseudouridine synthase compare
Psest_1491 -0.8 -1.1 Cold shock proteins compare
Psest_4196 -0.8 -2.1 Type II secretory pathway, component PulK compare
Psest_2748 -0.8 -0.8 Transcriptional regulator compare
Psest_3936 -0.8 -2.6 ATP-dependent protease HslVU, peptidase subunit compare
Psest_0357 -0.8 -1.2 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_3565 -0.8 -0.7 hypothetical protein compare
Psest_0836 -0.8 -3.1 Collagenase and related proteases compare


Specific Phenotypes

For 1 genes in this experiment

For stress 2-Furfuraldehyde in Pseudomonas stutzeri RCH2

For stress 2-Furfuraldehyde across organisms