Experiment set14S755 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete 3-nitroxypropanol 0.000416666666666667 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS06730 -5.9 -1.4 phosphopantothenate/pantothenate synthetase compare
MMP_RS00320 -5.4 -0.9 class I SAM-dependent methyltransferase compare
MMP_RS08715 -5.3 -1.3 formylmethanofuran dehydrogenase subunit B compare
MMP_RS06230 -5.2 -1.7 helix-turn-helix domain-containing protein compare
MMP_RS08650 -5.1 -2.6 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS01175 -5.0 -2.5 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS06600 -4.9 -0.8 class III signal peptide-containing protein compare
MMP_RS01385 -4.6 -0.6 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS08460 -4.5 -2.2 proteasome-activating nucleotidase compare
MMP_RS02900 -4.5 -0.5 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS01005 -4.4 -0.8 riboflavin synthase compare
MMP_RS04775 -4.3 -2.9 adenosylhomocysteinase compare
MMP_RS03640 -4.2 -2.9 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS08300 -4.2 -0.9 metal-sulfur cluster assembly factor compare
MMP_RS07005 -4.2 -0.5 4Fe-4S binding protein compare
MMP_RS00515 -4.1 -0.7 DUF655 domain-containing protein compare
MMP_RS05920 -4.0 -0.5 50S ribosomal protein L37e compare
MMP_RS00300 -4.0 -0.5 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS09025 -3.9 -0.8 hypothetical protein compare
MMP_RS00685 -3.7 -2.8 2-phospho-L-lactate guanylyltransferase compare
MMP_RS00110 -3.6 -2.6 hypothetical protein compare
MMP_RS03435 -3.6 -1.6 ketol-acid reductoisomerase compare
MMP_RS05265 -3.6 -2.2 2-isopropylmalate synthase compare
MMP_RS04890 -3.6 -0.6 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS07380 -3.6 -2.0 transcription elongation factor Spt5 compare
MMP_RS05845 -3.6 -1.4 tRNA-intron lyase compare
MMP_RS07755 -3.5 -0.8 DUF555 domain-containing protein compare
MMP_RS00305 -3.4 -1.6 phosphoribosyl-ATP diphosphatase compare
MMP_RS06020 -3.4 -3.7 archaeoflavoprotein AfpA compare
MMP_RS03400 -3.4 -1.9 archease compare
MMP_RS08645 -3.4 -5.1 UPF0179 family protein compare
MMP_RS01755 -3.2 -0.8 DUF2097 domain-containing protein compare
MMP_RS03600 -3.2 -1.8 triose-phosphate isomerase compare
MMP_RS04685 -3.2 -2.3 DUF126 domain-containing protein compare
MMP_RS01020 -3.1 -0.7 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS03025 -3.1 -4.3 molybdenum cofactor guanylyltransferase compare
MMP_RS08210 -3.1 -1.5 phosphatidylglycerophosphatase A compare
MMP_RS08350 -3.1 -0.8 hypothetical protein compare
MMP_RS08790 -3.0 -1.8 translation initiation factor IF-2 subunit alpha compare
MMP_RS03300 -3.0 -0.6 TOBE domain-containing protein compare
MMP_RS05930 -3.0 -1.6 3-isopropylmalate dehydratase large subunit compare
MMP_RS07735 -3.0 -0.5 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS03315 -2.9 -1.0 ferrous iron transport protein A compare
MMP_RS06895 -2.9 -1.1 selenocysteine-specific translation elongation factor compare
MMP_RS07600 -2.8 -1.7 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS06120 -2.8 -1.6 UPF0147 family protein compare
MMP_RS08820 -2.8 -3.8 hypothetical protein compare
MMP_RS09020 -2.8 -1.1 hypothetical protein compare
MMP_RS07445 -2.6 -5.7 helix-turn-helix domain-containing protein compare
MMP_RS02165 -2.6 -6.3 tRNA-dihydrouridine synthase compare
MMP_RS02240 -2.5 -1.6 methanogenesis marker 7 protein compare
MMP_RS01500 -2.5 -1.3 CBS domain-containing protein compare
MMP_RS04585 -2.4 -8.8 AIR synthase related protein compare
MMP_RS06625 -2.4 -1.3 DNA primase compare
MMP_RS01225 -2.4 -3.7 DUF5379 domain-containing protein compare
MMP_RS03580 -2.4 -2.0 signal recognition particle-docking protein FtsY compare
MMP_RS06295 -2.4 -3.6 methanogenesis marker 14 protein compare
MMP_RS06400 -2.4 -1.0 4Fe-4S binding protein compare
MMP_RS02875 -2.4 -4.7 chorismate pyruvate-lyase family protein compare
MMP_RS07390 -2.4 -1.7 cell division protein FtsZ compare
MMP_RS05550 -2.4 -0.5 cation:proton antiporter compare
MMP_RS06340 -2.3 -4.4 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS03205 -2.3 -1.0 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS07525 -2.3 -6.3 4Fe-4S binding protein compare
MMP_RS00730 -2.3 -3.8 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS06630 -2.2 -0.5 UPF0058 family protein compare
MMP_RS02280 -2.1 -0.6 DUF211 domain-containing protein compare
MMP_RS03960 -2.1 -0.6 hypothetical protein compare
MMP_RS01380 -2.1 -2.6 PHP domain-containing protein compare
MMP_RS00900 -2.1 -1.1 50S ribosomal protein L39e compare
MMP_RS06725 -2.1 -3.7 hypothetical protein compare
MMP_RS05245 -2.1 -6.9 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS01800 -2.1 -2.1 TIGR00303 family protein compare
MMP_RS07200 -2.0 -3.6 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS02480 -2.0 -1.6 hypothetical protein compare
MMP_RS00735 -2.0 -2.7 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS07425 -2.0 -3.4 GTP-binding protein compare
MMP_RS05250 -1.9 -2.5 NFYB/HAP3 family transcription factor subunit compare
MMP_RS04090 -1.9 -1.7 hypothetical protein compare
MMP_RS07625 -1.9 -2.3 cobalt ECF transporter T component CbiQ compare
MMP_RS06015 -1.9 -3.8 flavodoxin family protein compare
MMP_RS07385 -1.9 -1.8 protein translocase SEC61 complex subunit gamma compare
MMP_RS00115 -1.8 -7.6 radical SAM protein compare
MMP_RS08635 -1.8 -1.2 UbiA family prenyltransferase compare
MMP_RS07620 -1.8 -2.7 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS07635 -1.8 -2.1 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS07605 -1.8 -1.9 diadenylate cyclase compare
MMP_RS03385 -1.8 -0.7 cation diffusion facilitator family transporter compare
MMP_RS00810 -1.8 -4.0 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS05430 -1.7 -2.3 TIGR00288 family NYN domain-containing protein compare
MMP_RS08280 -1.7 -1.9 proteasome assembly chaperone family protein compare
MMP_RS05765 -1.7 -3.1 M42 family metallopeptidase compare
MMP_RS06475 -1.7 -3.0 FAD-dependent oxidoreductase compare
MMP_RS03465 -1.7 -0.9 adenine phosphoribosyltransferase compare
MMP_RS03445 -1.7 -0.6 methanogenesis marker 17 protein compare
MMP_RS01335 -1.6 -1.5 prefoldin subunit beta compare
MMP_RS03555 -1.6 -4.5 transcriptional regulator compare
MMP_RS08600 -1.6 -1.1 flagellar protein D compare
MMP_RS00895 -1.6 -2.2 hypothetical protein compare
MMP_RS01600 -1.6 -1.6 50S ribosomal protein L15e compare
MMP_RS03450 -1.6 -1.5 glycine synthesis protein GlyXS (from data) compare
MMP_RS05545 -1.6 -2.8 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS08435 -1.5 -1.3 Era-like GTP-binding protein compare
MMP_RS06285 -1.5 -1.1 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS06110 -1.5 -1.8 ATP-dependent protease LonB compare
MMP_RS00315 -1.5 -3.3 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS03035 -1.5 -2.2 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS00725 -1.5 -3.5 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS05815 -1.5 -1.1 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS02495 -1.5 -1.3 hypothetical protein compare
MMP_RS07615 -1.5 -3.3 energy-coupling factor ABC transporter permease compare
MMP_RS06200 -1.5 -4.8 M24 family metallopeptidase compare
MMP_RS01980 -1.5 -6.0 trimeric intracellular cation channel family protein compare
MMP_RS00850 -1.5 -3.1 TIGR01177 family methyltransferase compare
MMP_RS08165 -1.5 -1.4 phosphoglycerate dehydrogenase compare
MMP_RS01250 -1.5 -5.0 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS06325 -1.4 -0.9 hypothetical protein compare
MMP_RS02815 -1.4 -1.2 hypothetical protein compare
MMP_RS03305 -1.4 -3.0 winged helix-turn-helix domain-containing protein compare
MMP_RS01610 -1.4 -1.0 hypothetical protein compare
MMP_RS05875 -1.4 -1.6 hydroxyethylthiazole kinase compare
MMP_RS06855 -1.4 -4.6 hypothetical protein compare
MMP_RS07730 -1.4 -1.0 pyruvate synthase subunit beta compare
MMP_RS05835 -1.4 -0.4 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS04985 -1.4 -4.0 DUF2180 family protein compare
MMP_RS04850 -1.3 -7.4 UPF0254 family protein compare
MMP_RS04485 -1.3 -4.4 putative beta-lysine N-acetyltransferase compare
MMP_RS01985 -1.3 -3.1 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS02235 -1.3 -4.4 CBS domain-containing protein compare
MMP_RS06975 -1.3 -1.1 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS07685 -1.3 -4.4 TIGR01212 family radical SAM protein compare
MMP_RS07700 -1.2 -4.7 DUF1188 domain-containing protein compare
MMP_RS07365 -1.2 -4.6 2-phosphoglycerate kinase compare
MMP_RS02245 -1.2 -1.8 hypothetical protein compare
MMP_RS02145 -1.2 -2.7 winged helix-turn-helix transcriptional regulator compare
MMP_RS02190 -1.2 -1.4 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS07875 -1.2 -1.7 hypothetical protein compare
MMP_RS05830 -1.2 -2.2 peptidyl-prolyl cis-trans isomerase compare
MMP_RS03910 -1.2 -1.4 hypothetical protein compare
MMP_RS00430 -1.2 -1.9 hypothetical protein compare
MMP_RS07775 -1.2 -3.4 alanine dehydrogenase compare
MMP_RS01720 -1.2 -1.0 replication factor C large subunit compare
MMP_RS08200 -1.2 -6.6 archaeosine synthase subunit alpha compare
MMP_RS01435 -1.2 -2.8 DMT family transporter compare
MMP_RS07575 -1.2 -2.2 RNA ligase partner protein compare
MMP_RS06270 -1.2 -1.9 TIGR00300 family protein compare
MMP_RS07860 -1.1 -0.3 hypothetical protein compare
MMP_RS04980 -1.1 -5.5 DUF2193 domain-containing protein compare
MMP_RS05540 -1.1 -1.5 hypothetical protein compare
MMP_RS00040 -1.1 -3.3 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS01570 -1.1 -0.8 hypothetical protein compare
MMP_RS02170 -1.1 -1.5 CBS domain-containing protein compare
MMP_RS03800 -1.1 -1.7 hypothetical protein compare
MMP_RS08195 -1.1 -4.0 hypothetical protein compare
MMP_RS03145 -1.1 -2.4 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS07880 -1.1 -3.9 AAA family ATPase compare
MMP_RS06585 -1.0 -0.8 DMT family protein compare
MMP_RS04870 -1.0 -1.6 TIGR02253 family HAD-type hydrolase compare
MMP_RS06155 -1.0 -1.3 DUF4186 domain-containing protein compare
MMP_RS00050 -1.0 -2.9 AarF/UbiB family protein compare
MMP_RS00570 -1.0 -1.0 protein-L-isoaspartate O-methyltransferase compare
MMP_RS06920 -1.0 -3.9 AAA family ATPase compare
MMP_RS01445 -1.0 -3.1 hypothetical protein compare
MMP_RS01655 -1.0 -0.9 DsrE family protein compare
MMP_RS01420 -1.0 -1.0 hypothetical protein compare
MMP_RS05070 -1.0 -2.5 4Fe-4S dicluster domain-containing protein compare
MMP_RS03350 -1.0 -2.2 winged helix-turn-helix domain-containing protein compare
MMP_RS06930 -1.0 -3.5 MBL fold metallo-hydrolase compare
MMP_RS08370 -1.0 -0.3 cation:proton antiporter subunit C compare
MMP_RS02745 -1.0 -0.7 hypothetical protein compare
MMP_RS06885 -1.0 -1.0 50S ribosome-binding GTPase compare
MMP_RS07540 -1.0 -1.4 CBS domain-containing protein compare
MMP_RS02675 -1.0 -1.1 hypothetical protein compare
MMP_RS00720 -1.0 -2.8 metal-dependent hydrolase compare
MMP_RS05700 -1.0 -3.5 TfuA-related McrA-glycine thioamidation protein compare
MMP_RS03680 -1.0 -3.7 hypothetical protein compare
MMP_RS02410 -1.0 -1.2 ABC transporter substrate-binding protein compare
MMP_RS08675 -0.9 -1.1 class III signal peptide-containing protein compare
MMP_RS01260 -0.9 -1.2 HDIG domain-containing protein compare
MMP_RS00185 -0.9 -4.4 potassium channel protein compare
MMP_RS01575 -0.9 -2.2 aldolase compare
MMP_RS01195 -0.9 -0.5 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS01700 -0.9 -0.4 dihydroxy-acid dehydratase compare
MMP_RS05365 -0.9 -0.7 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS03325 -0.9 -2.2 hypothetical protein compare
MMP_RS00665 -0.9 -1.9 hypothetical protein compare
MMP_RS03470 -0.9 -3.3 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS06175 -0.9 -2.2 winged helix-turn-helix transcriptional regulator compare
MMP_RS00295 -0.9 -0.8 gamma carbonic anhydrase family protein compare
MMP_RS01325 -0.8 -0.6 dihydroneopterin aldolase family protein compare
MMP_RS05020 -0.8 -1.6 hypothetical protein compare
MMP_RS07750 -0.8 -1.6 DUF357 domain-containing protein compare
MMP_RS02940 -0.8 -2.3 TatD family hydrolase compare
MMP_RS03490 -0.8 -0.7 DUF2115 domain-containing protein compare
MMP_RS08225 -0.8 -2.7 RimK family alpha-L-glutamate ligase compare
MMP_RS01745 -0.8 -2.2 AMP phosphorylase compare
MMP_RS08570 -0.8 -2.7 coenzyme F420-0:L-glutamate ligase compare
MMP_RS07115 -0.8 -2.2 MBL fold metallo-hydrolase compare
MMP_RS07845 -0.8 -0.5 LL-diaminopimelate aminotransferase compare
MMP_RS05100 -0.8 -5.1 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress 3-nitroxypropanol across organisms