Experiment set14S750 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete sodium bromide 250 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS00305 -5.5 -1.8 phosphoribosyl-ATP diphosphatase compare
MMP_RS07005 -4.4 -0.6 4Fe-4S binding protein compare
MMP_RS00300 -4.3 -0.6 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS03435 -4.2 -2.0 ketol-acid reductoisomerase compare
MMP_RS09020 -4.1 -1.7 hypothetical protein compare
MMP_RS04890 -3.8 -0.8 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS01225 -3.5 -4.6 DUF5379 domain-containing protein compare
MMP_RS03640 -3.5 -3.3 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS01020 -3.5 -0.9 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS06630 -3.4 -0.7 UPF0058 family protein compare
MMP_RS01385 -3.4 -0.7 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS03960 -3.3 -0.8 hypothetical protein compare
MMP_RS03315 -3.3 -1.4 ferrous iron transport protein A compare
MMP_RS02900 -3.3 -0.7 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS07735 -3.2 -0.7 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS06295 -3.2 -5.8 methanogenesis marker 14 protein compare
MMP_RS04090 -3.2 -2.9 hypothetical protein compare
MMP_RS06625 -3.1 -1.9 DNA primase compare
MMP_RS05845 -3.0 -1.7 tRNA-intron lyase compare
MMP_RS08645 -3.0 -9.1 UPF0179 family protein compare
MMP_RS06885 -3.0 -2.1 50S ribosome-binding GTPase compare
MMP_RS04480 -3.0 -20.6 lysine 2 3-aminomutase compare
MMP_RS06230 -3.0 -2.6 helix-turn-helix domain-containing protein compare
MMP_RS04585 -3.0 -9.2 AIR synthase related protein compare
MMP_RS08720 -2.9 -1.3 4Fe-4S binding protein compare
MMP_RS00130 -2.9 -1.1 nickel-responsive transcriptional regulator NikR compare
MMP_RS04485 -2.9 -16.3 putative beta-lysine N-acetyltransferase compare
MMP_RS01755 -2.9 -1.0 DUF2097 domain-containing protein compare
MMP_RS07635 -2.9 -5.6 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS02240 -2.9 -2.8 methanogenesis marker 7 protein compare
MMP_RS02280 -2.9 -0.8 DUF211 domain-containing protein compare
MMP_RS01500 -2.8 -1.5 CBS domain-containing protein compare
MMP_RS00515 -2.8 -1.0 DUF655 domain-containing protein compare
MMP_RS06680 -2.8 -7.8 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS05920 -2.7 -0.6 50S ribosomal protein L37e compare
MMP_RS06895 -2.7 -1.5 selenocysteine-specific translation elongation factor compare
MMP_RS07380 -2.6 -2.2 transcription elongation factor Spt5 compare
MMP_RS03305 -2.6 -7.8 winged helix-turn-helix domain-containing protein compare
MMP_RS05515 -2.6 -5.8 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS01380 -2.5 -3.6 PHP domain-containing protein compare
MMP_RS08715 -2.5 -1.5 formylmethanofuran dehydrogenase subunit B compare
MMP_RS07625 -2.5 -3.9 cobalt ECF transporter T component CbiQ compare
MMP_RS08635 -2.5 -2.0 UbiA family prenyltransferase compare
MMP_RS03400 -2.4 -1.9 archease compare
MMP_RS00110 -2.4 -2.6 hypothetical protein compare
MMP_RS06350 -2.4 -5.0 HesA/MoeB/ThiF family protein compare
MMP_RS03445 -2.4 -0.9 methanogenesis marker 17 protein compare
MMP_RS08460 -2.4 -2.1 proteasome-activating nucleotidase compare
MMP_RS03600 -2.4 -1.7 triose-phosphate isomerase compare
MMP_RS06685 -2.4 -7.2 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS05250 -2.4 -4.1 NFYB/HAP3 family transcription factor subunit compare
MMP_RS06975 -2.4 -2.2 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS07845 -2.3 -1.3 LL-diaminopimelate aminotransferase compare
MMP_RS06340 -2.3 -6.6 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS01610 -2.3 -2.2 hypothetical protein compare
MMP_RS07525 -2.3 -6.0 4Fe-4S binding protein compare
MMP_RS07580 -2.3 -2.2 DUF356 domain-containing protein compare
MMP_RS08820 -2.2 -4.3 hypothetical protein compare
MMP_RS06110 -2.2 -3.4 ATP-dependent protease LonB compare
MMP_RS07755 -2.2 -1.1 DUF555 domain-containing protein compare
MMP_RS06730 -2.1 -1.4 phosphopantothenate/pantothenate synthetase compare
MMP_RS03015 -2.1 -5.9 GTP 3' 8-cyclase MoaA compare
MMP_RS03555 -2.1 -5.9 transcriptional regulator compare
MMP_RS03205 -2.1 -1.3 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS08300 -2.1 -1.0 metal-sulfur cluster assembly factor compare
MMP_RS06355 -2.1 -2.0 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS06395 -2.1 -4.0 ThiF family adenylyltransferase compare
MMP_RS07765 -2.1 -8.5 sodium:alanine symporter family protein compare
MMP_RS07445 -2.0 -7.2 helix-turn-helix domain-containing protein compare
MMP_RS00895 -2.0 -3.5 hypothetical protein compare
MMP_RS01985 -2.0 -4.1 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS07600 -2.0 -2.0 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS05430 -2.0 -3.8 TIGR00288 family NYN domain-containing protein compare
MMP_RS06700 -2.0 -7.8 hypothetical protein compare
MMP_RS08790 -2.0 -1.9 translation initiation factor IF-2 subunit alpha compare
MMP_RS08165 -2.0 -2.5 phosphoglycerate dehydrogenase compare
MMP_RS07700 -2.0 -8.5 DUF1188 domain-containing protein compare
MMP_RS01005 -1.9 -1.0 riboflavin synthase compare
MMP_RS08650 -1.9 -2.8 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS00115 -1.9 -7.4 radical SAM protein compare
MMP_RS07630 -1.8 -1.5 ATP-binding cassette domain-containing protein compare
MMP_RS04955 -1.8 -4.1 DNA topoisomerase I compare
MMP_RS01800 -1.8 -2.8 TIGR00303 family protein compare
MMP_RS06725 -1.8 -6.9 hypothetical protein compare
MMP_RS01175 -1.8 -2.2 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS05540 -1.7 -3.1 hypothetical protein compare
MMP_RS06600 -1.7 -0.8 class III signal peptide-containing protein compare
MMP_RS01720 -1.7 -1.2 replication factor C large subunit compare
MMP_RS07425 -1.7 -4.5 GTP-binding protein compare
MMP_RS06105 -1.7 -5.5 hydrogenase maturation peptidase HycI compare
MMP_RS01795 -1.7 -1.1 methanogenesis marker 6 protein compare
MMP_RS03580 -1.6 -2.3 signal recognition particle-docking protein FtsY compare
MMP_RS00295 -1.6 -1.6 gamma carbonic anhydrase family protein compare
MMP_RS02800 -1.6 -5.3 nucleotidyltransferase domain-containing protein compare
MMP_RS00810 -1.6 -6.4 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS06020 -1.6 -3.5 archaeoflavoprotein AfpA compare
MMP_RS06855 -1.6 -5.4 hypothetical protein compare
MMP_RS03025 -1.6 -3.7 molybdenum cofactor guanylyltransferase compare
MMP_RS06475 -1.6 -2.8 FAD-dependent oxidoreductase compare
MMP_RS07620 -1.6 -4.1 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS01545 -1.6 -0.8 CBS domain-containing protein compare
MMP_RS02165 -1.6 -6.2 tRNA-dihydrouridine synthase compare
MMP_RS07685 -1.6 -6.6 TIGR01212 family radical SAM protein compare
MMP_RS06175 -1.6 -4.0 winged helix-turn-helix transcriptional regulator compare
MMP_RS07730 -1.6 -1.1 pyruvate synthase subunit beta compare
MMP_RS01365 -1.6 -2.4 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS00730 -1.6 -6.1 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS02875 -1.6 -6.9 chorismate pyruvate-lyase family protein compare
MMP_RS01335 -1.5 -2.1 prefoldin subunit beta compare
MMP_RS07615 -1.5 -5.3 energy-coupling factor ABC transporter permease compare
MMP_RS06345 -1.5 -6.9 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS02190 -1.5 -2.6 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS07365 -1.5 -7.1 2-phosphoglycerate kinase compare
MMP_RS07545 -1.5 -0.7 HTH domain-containing protein compare
MMP_RS01840 -1.5 -6.2 TIGR00289 family protein compare
MMP_RS00735 -1.5 -2.6 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS02175 -1.5 -0.7 DUF1611 domain-containing protein compare
MMP_RS05865 -1.5 -2.2 hypothetical protein compare
MMP_RS01075 -1.4 -1.4 hypothetical protein compare
MMP_RS07200 -1.4 -4.0 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS00725 -1.4 -7.1 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS06400 -1.4 -0.9 4Fe-4S binding protein compare
MMP_RS06120 -1.4 -1.7 UPF0147 family protein compare
MMP_RS01980 -1.4 -8.8 trimeric intracellular cation channel family protein compare
MMP_RS07775 -1.4 -3.1 alanine dehydrogenase compare
MMP_RS00685 -1.4 -2.9 2-phospho-L-lactate guanylyltransferase compare
MMP_RS07605 -1.4 -2.5 diadenylate cyclase compare
MMP_RS06015 -1.4 -4.9 flavodoxin family protein compare
MMP_RS07750 -1.4 -3.1 DUF357 domain-containing protein compare
MMP_RS09050 -1.4 -2.3 CAP domain-containing protein compare
MMP_RS00555 -1.3 -5.6 MFS transporter compare
MMP_RS05510 -1.3 -4.1 Rrf2 family transcriptional regulator compare
MMP_RS01265 -1.3 -0.9 hypothetical protein compare
MMP_RS03095 -1.3 -4.6 diphthine synthase compare
MMP_RS04850 -1.3 -9.2 UPF0254 family protein compare
MMP_RS09025 -1.3 -0.8 hypothetical protein compare
MMP_RS04710 -1.3 -1.1 hypothetical protein compare
MMP_RS05765 -1.3 -4.3 M42 family metallopeptidase compare
MMP_RS06200 -1.3 -6.3 M24 family metallopeptidase compare
MMP_RS01250 -1.3 -4.2 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS05295 -1.3 -6.6 minichromosome maintenance protein MCM compare
MMP_RS01600 -1.3 -1.7 50S ribosomal protein L15e compare
MMP_RS08785 -1.2 -0.7 RNA-protein complex protein Nop10 compare
MMP_RS01420 -1.2 -1.4 hypothetical protein compare
MMP_RS01790 -1.2 -3.9 restriction endonuclease compare
MMP_RS00900 -1.2 -1.4 50S ribosomal protein L39e compare
MMP_RS08675 -1.2 -2.1 class III signal peptide-containing protein compare
MMP_RS05355 -1.2 -0.7 hypothetical protein compare
MMP_RS05245 -1.2 -5.6 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS01960 -1.2 -0.5 hypothetical protein compare
MMP_RS07115 -1.2 -4.4 MBL fold metallo-hydrolase compare
MMP_RS08435 -1.2 -1.3 Era-like GTP-binding protein compare
MMP_RS03035 -1.2 -2.4 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS05875 -1.2 -2.5 hydroxyethylthiazole kinase compare
MMP_RS00915 -1.1 -2.7 DUF116 domain-containing protein compare
MMP_RS02100 -1.1 -2.3 metallophosphoesterase compare
MMP_RS05815 -1.1 -0.9 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS00315 -1.1 -3.3 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS05095 -1.1 -3.7 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMP_RS03140 -1.1 -5.1 hypothetical protein compare
MMP_RS04990 -1.1 -4.3 aquaporin family protein compare
MMP_RS06865 -1.1 -1.2 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS02195 -1.1 -1.9 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS05550 -1.1 -0.4 cation:proton antiporter compare
MMP_RS06315 -1.1 -0.5 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS02235 -1.1 -4.5 CBS domain-containing protein compare
MMP_RS07695 -1.0 -3.3 DUF3236 domain-containing protein compare
MMP_RS06930 -1.0 -6.0 MBL fold metallo-hydrolase compare
MMP_RS07090 -1.0 -3.3 tRNA (adenine-N1)-methyltransferase compare
MMP_RS05125 -1.0 -5.3 D-aminoacyl-tRNA deacylase compare
MMP_RS03145 -1.0 -3.0 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS01655 -1.0 -2.2 DsrE family protein compare
MMP_RS08940 -1.0 -0.9 MetS family NSS transporter small subunit compare
MMP_RS00320 -1.0 -0.9 class I SAM-dependent methyltransferase compare
MMP_RS00455 -1.0 -3.9 orotate phosphoribosyltransferase-like protein compare
MMP_RS01325 -0.9 -1.2 dihydroneopterin aldolase family protein compare
MMP_RS06980 -0.9 -2.9 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS03350 -0.9 -1.9 winged helix-turn-helix domain-containing protein compare
MMP_RS08210 -0.9 -1.1 phosphatidylglycerophosphatase A compare
MMP_RS00620 -0.9 -4.2 4Fe-4S binding protein compare
MMP_RS08570 -0.9 -4.6 coenzyme F420-0:L-glutamate ligase compare
MMP_RS07535 -0.9 -4.2 4Fe-4S binding protein compare
MMP_RS06515 -0.9 -1.5 UPF0489 family protein compare
MMP_RS02170 -0.9 -2.5 CBS domain-containing protein compare
MMP_RS08200 -0.9 -6.4 archaeosine synthase subunit alpha compare
MMP_RS01700 -0.9 -0.5 dihydroxy-acid dehydratase compare
MMP_RS08995 -0.9 -0.8 hypothetical protein compare
MMP_RS04870 -0.9 -2.1 TIGR02253 family HAD-type hydrolase compare
MMP_RS05075 -0.9 -5.6 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMP_RS04780 -0.9 -1.4 ribonuclease P compare
MMP_RS05100 -0.9 -6.5 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMP_RS00040 -0.9 -3.6 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS08745 -0.9 -2.4 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS05080 -0.9 -4.7 acetyl-CoA decarbonylase/synthase complex subunit delta compare
MMP_RS05060 -0.9 -3.9 AAA family ATPase compare
MMP_RS03680 -0.9 -2.8 hypothetical protein compare
MMP_RS01085 -0.9 -1.0 hypothetical protein compare
MMP_RS08415 -0.9 -1.9 radical SAM protein compare
MMP_RS02245 -0.8 -1.3 hypothetical protein compare
MMP_RS00185 -0.8 -5.0 potassium channel protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress sodium bromide across organisms