Experiment set14S747 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete no stress control

200 most important genes:

  gene name fitness t score description  
MMP_RS01020 -5.5 -0.8 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS06625 -4.9 -1.9 DNA primase compare
MMP_RS05265 -4.8 -2.4 2-isopropylmalate synthase compare
MMP_RS07860 -4.6 -0.7 hypothetical protein compare
MMP_RS02900 -4.6 -0.7 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS01175 -4.5 -2.9 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS08300 -4.3 -1.1 metal-sulfur cluster assembly factor compare
MMP_RS00305 -4.2 -1.8 phosphoribosyl-ATP diphosphatase compare
MMP_RS07380 -4.2 -2.4 transcription elongation factor Spt5 compare
MMP_RS01225 -3.9 -4.9 DUF5379 domain-containing protein compare
MMP_RS01500 -3.7 -1.6 CBS domain-containing protein compare
MMP_RS04890 -3.7 -0.8 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS01325 -3.7 -1.9 dihydroneopterin aldolase family protein compare
MMP_RS05845 -3.7 -1.7 tRNA-intron lyase compare
MMP_RS08790 -3.7 -1.8 translation initiation factor IF-2 subunit alpha compare
MMP_RS06230 -3.6 -2.8 helix-turn-helix domain-containing protein compare
MMP_RS07635 -3.4 -6.3 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS04585 -3.4 -8.8 AIR synthase related protein compare
MMP_RS01795 -3.4 -1.4 methanogenesis marker 6 protein compare
MMP_RS06110 -3.4 -4.0 ATP-dependent protease LonB compare
MMP_RS08715 -3.3 -1.6 formylmethanofuran dehydrogenase subunit B compare
MMP_RS06120 -3.3 -1.9 UPF0147 family protein compare
MMP_RS06630 -3.3 -0.7 UPF0058 family protein compare
MMP_RS08635 -3.3 -2.0 UbiA family prenyltransferase compare
MMP_RS01610 -3.2 -2.3 hypothetical protein compare
MMP_RS01755 -3.2 -0.9 DUF2097 domain-containing protein compare
MMP_RS00685 -3.2 -3.3 2-phospho-L-lactate guanylyltransferase compare
MMP_RS00695 -3.1 -0.6 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS08210 -3.0 -1.9 phosphatidylglycerophosphatase A compare
MMP_RS03600 -3.0 -1.9 triose-phosphate isomerase compare
MMP_RS06295 -2.9 -5.8 methanogenesis marker 14 protein compare
MMP_RS04710 -2.8 -1.5 hypothetical protein compare
MMP_RS08435 -2.8 -1.8 Era-like GTP-binding protein compare
MMP_RS08460 -2.7 -2.3 proteasome-activating nucleotidase compare
MMP_RS07525 -2.7 -7.8 4Fe-4S binding protein compare
MMP_RS07005 -2.6 -0.5 4Fe-4S binding protein compare
MMP_RS07445 -2.6 -7.1 helix-turn-helix domain-containing protein compare
MMP_RS02280 -2.6 -0.7 DUF211 domain-containing protein compare
MMP_RS03555 -2.6 -8.0 transcriptional regulator compare
MMP_RS08645 -2.6 -6.7 UPF0179 family protein compare
MMP_RS06285 -2.5 -1.8 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS00320 -2.5 -1.3 class I SAM-dependent methyltransferase compare
MMP_RS08720 -2.5 -1.2 4Fe-4S binding protein compare
MMP_RS02240 -2.5 -2.1 methanogenesis marker 7 protein compare
MMP_RS06725 -2.5 -8.6 hypothetical protein compare
MMP_RS00515 -2.4 -0.8 DUF655 domain-containing protein compare
MMP_RS01265 -2.4 -2.1 hypothetical protein compare
MMP_RS07200 -2.3 -4.8 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS06975 -2.3 -2.1 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS06340 -2.3 -5.9 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS04685 -2.3 -2.4 DUF126 domain-containing protein compare
MMP_RS06015 -2.3 -7.6 flavodoxin family protein compare
MMP_RS09020 -2.3 -1.1 hypothetical protein compare
MMP_RS03960 -2.2 -0.7 hypothetical protein compare
MMP_RS03205 -2.2 -1.2 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS06400 -2.2 -1.2 4Fe-4S binding protein compare
MMP_RS03435 -2.2 -1.5 ketol-acid reductoisomerase compare
MMP_RS05355 -2.2 -0.8 hypothetical protein compare
MMP_RS01380 -2.2 -3.3 PHP domain-containing protein compare
MMP_RS00115 -2.1 -9.5 radical SAM protein compare
MMP_RS01005 -2.1 -0.9 riboflavin synthase compare
MMP_RS02165 -2.1 -7.9 tRNA-dihydrouridine synthase compare
MMP_RS08820 -2.1 -2.3 hypothetical protein compare
MMP_RS03400 -2.1 -2.0 archease compare
MMP_RS03640 -2.1 -2.5 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS03580 -2.1 -2.9 signal recognition particle-docking protein FtsY compare
MMP_RS02875 -2.0 -6.6 chorismate pyruvate-lyase family protein compare
MMP_RS05815 -2.0 -1.5 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS05430 -2.0 -3.6 TIGR00288 family NYN domain-containing protein compare
MMP_RS03110 -2.0 -4.8 glycosyltransferase family 2 protein compare
MMP_RS07385 -2.0 -2.4 protein translocase SEC61 complex subunit gamma compare
MMP_RS06680 -2.0 -7.1 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS06730 -1.9 -1.1 phosphopantothenate/pantothenate synthetase compare
MMP_RS01800 -1.9 -3.0 TIGR00303 family protein compare
MMP_RS01700 -1.9 -0.6 dihydroxy-acid dehydratase compare
MMP_RS07600 -1.9 -1.4 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS02235 -1.9 -8.2 CBS domain-containing protein compare
MMP_RS03035 -1.9 -3.0 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS07755 -1.9 -0.9 DUF555 domain-containing protein compare
MMP_RS06885 -1.9 -2.0 50S ribosome-binding GTPase compare
MMP_RS06020 -1.9 -2.2 archaeoflavoprotein AfpA compare
MMP_RS06395 -1.8 -2.7 ThiF family adenylyltransferase compare
MMP_RS08165 -1.8 -1.9 phosphoglycerate dehydrogenase compare
MMP_RS06855 -1.8 -6.4 hypothetical protein compare
MMP_RS00895 -1.8 -3.0 hypothetical protein compare
MMP_RS00315 -1.8 -6.2 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS07630 -1.8 -1.2 ATP-binding cassette domain-containing protein compare
MMP_RS06270 -1.8 -3.5 TIGR00300 family protein compare
MMP_RS07620 -1.8 -3.6 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS05020 -1.8 -2.8 hypothetical protein compare
MMP_RS02110 -1.8 -1.8 hypothetical protein compare
MMP_RS08675 -1.7 -2.4 class III signal peptide-containing protein compare
MMP_RS05545 -1.7 -3.7 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS06685 -1.7 -6.4 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS07425 -1.7 -4.4 GTP-binding protein compare
MMP_RS00300 -1.7 -0.4 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS01250 -1.7 -4.8 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS05865 -1.7 -2.4 hypothetical protein compare
MMP_RS07765 -1.7 -6.5 sodium:alanine symporter family protein compare
MMP_RS00725 -1.6 -6.4 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS00810 -1.6 -4.6 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS03025 -1.6 -3.4 molybdenum cofactor guanylyltransferase compare
MMP_RS05245 -1.6 -6.9 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS01620 -1.6 -3.1 hypothetical protein compare
MMP_RS04775 -1.6 -2.4 adenosylhomocysteinase compare
MMP_RS00675 -1.6 -0.7 nitroreductase family protein compare
MMP_RS07700 -1.6 -5.9 DUF1188 domain-containing protein compare
MMP_RS03445 -1.6 -0.7 methanogenesis marker 17 protein compare
MMP_RS06200 -1.5 -6.6 M24 family metallopeptidase compare
MMP_RS06035 -1.5 -7.2 glycosyltransferase family 2 protein compare
MMP_RS07390 -1.5 -1.7 cell division protein FtsZ compare
MMP_RS07615 -1.5 -3.9 energy-coupling factor ABC transporter permease compare
MMP_RS03145 -1.5 -3.8 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS05515 -1.5 -4.4 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS06350 -1.5 -3.8 HesA/MoeB/ThiF family protein compare
MMP_RS07625 -1.5 -2.2 cobalt ECF transporter T component CbiQ compare
MMP_RS01985 -1.5 -3.1 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS08855 -1.4 -6.3 hypothetical protein compare
MMP_RS01085 -1.4 -1.2 hypothetical protein compare
MMP_RS00130 -1.4 -0.8 nickel-responsive transcriptional regulator NikR compare
MMP_RS01980 -1.4 -8.3 trimeric intracellular cation channel family protein compare
MMP_RS07775 -1.4 -3.2 alanine dehydrogenase compare
MMP_RS05765 -1.4 -4.2 M42 family metallopeptidase compare
MMP_RS02175 -1.4 -0.6 DUF1611 domain-containing protein compare
MMP_RS00140 -1.4 -3.6 DUF192 domain-containing protein compare
MMP_RS08350 -1.4 -0.7 hypothetical protein compare
MMP_RS07365 -1.4 -6.2 2-phosphoglycerate kinase compare
MMP_RS05635 -1.4 -5.4 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS02410 -1.3 -2.1 ABC transporter substrate-binding protein compare
MMP_RS00110 -1.3 -1.5 hypothetical protein compare
MMP_RS04870 -1.3 -3.4 TIGR02253 family HAD-type hydrolase compare
MMP_RS04850 -1.3 -7.7 UPF0254 family protein compare
MMP_RS03490 -1.3 -1.2 DUF2115 domain-containing protein compare
MMP_RS08860 -1.3 -3.2 MinD/ParA family protein compare
MMP_RS03450 -1.3 -1.3 glycine synthesis protein GlyXS (from data) compare
MMP_RS05540 -1.2 -1.9 hypothetical protein compare
MMP_RS01290 -1.2 -5.1 class III signal peptide-containing protein compare
MMP_RS00735 -1.2 -2.4 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS00945 -1.2 -0.8 PadR family transcriptional regulator compare
MMP_RS04090 -1.2 -1.4 hypothetical protein compare
MMP_RS07330 -1.2 -8.1 membrane protein compare
MMP_RS06345 -1.2 -5.2 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS04990 -1.2 -4.1 aquaporin family protein compare
MMP_RS01310 -1.2 -6.4 hypothetical protein compare
MMP_RS02345 -1.2 -1.8 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS07605 -1.1 -2.0 diadenylate cyclase compare
MMP_RS01275 -1.1 -4.0 class III signal peptide-containing protein compare
MMP_RS07535 -1.1 -4.9 4Fe-4S binding protein compare
MMP_RS08750 -1.1 -1.1 hypothetical protein compare
MMP_RS01270 -1.1 -6.4 prepilin peptidase compare
MMP_RS06175 -1.1 -3.4 winged helix-turn-helix transcriptional regulator compare
MMP_RS01305 -1.1 -6.9 hypothetical protein compare
MMP_RS05095 -1.1 -3.5 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMP_RS07845 -1.1 -0.8 LL-diaminopimelate aminotransferase compare
MMP_RS08940 -1.1 -0.9 MetS family NSS transporter small subunit compare
MMP_RS03125 -1.1 -2.4 cell division ATPase MinD compare
MMP_RS01280 -1.1 -5.3 DUF515 domain-containing protein compare
MMP_RS05550 -1.1 -0.4 cation:proton antiporter compare
MMP_RS01295 -1.1 -5.4 hypothetical protein compare
MMP_RS03475 -1.1 -0.3 hypothetical protein compare
MMP_RS01495 -1.1 -4.2 TraB/GumN family protein compare
MMP_RS00245 -1.0 -7.2 type II secretion system F family protein compare
MMP_RS07900 -1.0 -1.3 YeeE/YedE family protein compare
MMP_RS05295 -1.0 -4.3 minichromosome maintenance protein MCM compare
MMP_RS04985 -1.0 -2.8 DUF2180 family protein compare
MMP_RS01445 -1.0 -2.6 hypothetical protein compare
MMP_RS02840 -1.0 -2.5 DUF123 domain-containing protein compare
MMP_RS00250 -1.0 -6.7 Flp pilus assembly complex ATPase component TadA compare
MMP_RS00050 -1.0 -3.2 AarF/UbiB family protein compare
MMP_RS08200 -1.0 -5.9 archaeosine synthase subunit alpha compare
MMP_RS06355 -1.0 -0.9 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS01285 -1.0 -5.1 hypothetical protein compare
MMP_RS00900 -1.0 -0.9 50S ribosomal protein L39e compare
MMP_RS01655 -1.0 -1.1 DsrE family protein compare
MMP_RS02170 -1.0 -2.3 CBS domain-containing protein compare
MMP_RS01545 -1.0 -0.5 CBS domain-containing protein compare
MMP_RS05250 -1.0 -2.1 NFYB/HAP3 family transcription factor subunit compare
MMP_RS04485 -1.0 -4.0 putative beta-lysine N-acetyltransferase compare
MMP_RS07545 -1.0 -0.5 HTH domain-containing protein compare
MMP_RS08930 -0.9 -1.0 hypothetical protein compare
MMP_RS00730 -0.9 -2.2 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS03305 -0.9 -3.4 winged helix-turn-helix domain-containing protein compare
MMP_RS05510 -0.9 -3.4 Rrf2 family transcriptional regulator compare
MMP_RS00185 -0.9 -4.2 potassium channel protein compare
MMP_RS01315 -0.9 -7.1 DUF2341 domain-containing protein compare
MMP_RS08745 -0.9 -2.6 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS08225 -0.9 -4.0 RimK family alpha-L-glutamate ligase compare
MMP_RS00570 -0.9 -0.8 protein-L-isoaspartate O-methyltransferase compare
MMP_RS07750 -0.9 -2.6 DUF357 domain-containing protein compare
MMP_RS02340 -0.9 -1.0 DNA-directed RNA polymerase subunit E'' compare
MMP_RS06930 -0.9 -4.6 MBL fold metallo-hydrolase compare
MMP_RS01335 -0.9 -1.1 prefoldin subunit beta compare
MMP_RS04980 -0.9 -4.4 DUF2193 domain-containing protein compare
MMP_RS06290 -0.9 -1.7 DNA repair and recombination protein RadA compare
MMP_RS00240 -0.9 -4.5 type II secretion system F family protein compare
MMP_RS02020 -0.9 -1.8 gamma-glutamylcyclotransferase compare
MMP_RS00040 -0.9 -2.3 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS05580 -0.8 -5.0 glycosyltransferase compare
MMP_RS03680 -0.8 -4.0 hypothetical protein compare
MMP_RS05090 -0.8 -3.3 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in no stress control experiments