Experiment set14S743 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete 3-nitroxypropanol 0.00833333333333333 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS00945 -5.8 -0.8 PadR family transcriptional regulator compare
MMP_RS01325 -5.3 -1.5 dihydroneopterin aldolase family protein compare
MMP_RS01175 -5.2 -1.8 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS07380 -4.9 -1.5 transcription elongation factor Spt5 compare
MMP_RS07355 -4.9 -0.7 transcription factor S compare
MMP_RS08460 -4.8 -1.7 proteasome-activating nucleotidase compare
MMP_RS06895 -4.7 -1.1 selenocysteine-specific translation elongation factor compare
MMP_RS09020 -4.6 -1.1 hypothetical protein compare
MMP_RS06400 -4.6 -1.1 4Fe-4S binding protein compare
MMP_RS01795 -4.3 -1.0 methanogenesis marker 6 protein compare
MMP_RS08715 -4.1 -1.1 formylmethanofuran dehydrogenase subunit B compare
MMP_RS05265 -3.9 -1.3 2-isopropylmalate synthase compare
MMP_RS01385 -3.9 -0.5 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS00735 -3.6 -1.6 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS08595 -3.6 -0.7 flagellar protein C compare
MMP_RS00515 -3.4 -0.7 DUF655 domain-containing protein compare
MMP_RS01500 -3.3 -1.5 CBS domain-containing protein compare
MMP_RS05845 -3.3 -1.3 tRNA-intron lyase compare
MMP_RS05815 -3.3 -1.3 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS00300 -3.3 -0.5 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS04710 -3.3 -1.3 hypothetical protein compare
MMP_RS07545 -3.2 -0.6 HTH domain-containing protein compare
MMP_RS03080 -3.2 -1.8 universal stress protein compare
MMP_RS08720 -3.2 -0.9 4Fe-4S binding protein compare
MMP_RS03435 -3.1 -1.5 ketol-acid reductoisomerase compare
MMP_RS01700 -3.0 -0.6 dihydroxy-acid dehydratase compare
MMP_RS08745 -3.0 -4.7 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS08940 -2.9 -1.0 MetS family NSS transporter small subunit compare
MMP_RS04890 -2.9 -0.6 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS04870 -2.8 -2.6 TIGR02253 family HAD-type hydrolase compare
MMP_RS03445 -2.8 -0.7 methanogenesis marker 17 protein compare
MMP_RS06315 -2.7 -0.5 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS01960 -2.7 -0.5 hypothetical protein compare
MMP_RS04685 -2.7 -1.9 DUF126 domain-containing protein compare
MMP_RS06110 -2.6 -2.4 ATP-dependent protease LonB compare
MMP_RS03600 -2.6 -1.5 triose-phosphate isomerase compare
MMP_RS05430 -2.5 -4.4 TIGR00288 family NYN domain-containing protein compare
MMP_RS03400 -2.5 -1.6 archease compare
MMP_RS06630 -2.5 -0.5 UPF0058 family protein compare
MMP_RS07630 -2.5 -1.2 ATP-binding cassette domain-containing protein compare
MMP_RS07735 -2.3 -0.5 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS06355 -2.3 -1.2 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS01380 -2.2 -2.9 PHP domain-containing protein compare
MMP_RS08350 -2.2 -0.7 hypothetical protein compare
MMP_RS01545 -2.2 -0.7 CBS domain-containing protein compare
MMP_RS02235 -2.1 -6.9 CBS domain-containing protein compare
MMP_RS04485 -2.1 -7.2 putative beta-lysine N-acetyltransferase compare
MMP_RS00320 -2.1 -1.1 class I SAM-dependent methyltransferase compare
MMP_RS07620 -2.0 -2.1 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS06015 -2.0 -4.1 flavodoxin family protein compare
MMP_RS00130 -2.0 -0.7 nickel-responsive transcriptional regulator NikR compare
MMP_RS00295 -2.0 -1.1 gamma carbonic anhydrase family protein compare
MMP_RS05095 -2.0 -3.9 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMP_RS01655 -1.9 -2.1 DsrE family protein compare
MMP_RS03640 -1.8 -1.8 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS01650 -1.8 -0.7 sulfurtransferase TusA family protein compare
MMP_RS06165 -1.8 -4.6 ABC transporter permease compare
MMP_RS05835 -1.8 -0.5 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS01180 -1.7 -0.9 XTP/dITP diphosphatase compare
MMP_RS08995 -1.7 -0.8 hypothetical protein compare
MMP_RS03580 -1.6 -1.7 signal recognition particle-docking protein FtsY compare
MMP_RS04585 -1.6 -4.5 AIR synthase related protein compare
MMP_RS02900 -1.6 -0.4 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS07635 -1.6 -2.9 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS03035 -1.6 -1.8 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS06395 -1.6 -2.1 ThiF family adenylyltransferase compare
MMP_RS05765 -1.6 -3.1 M42 family metallopeptidase compare
MMP_RS06840 -1.6 -0.6 DNA-directed RNA polymerase subunit N compare
MMP_RS08820 -1.6 -2.2 hypothetical protein compare
MMP_RS06020 -1.6 -2.2 archaeoflavoprotein AfpA compare
MMP_RS03315 -1.6 -0.7 ferrous iron transport protein A compare
MMP_RS08280 -1.6 -1.6 proteasome assembly chaperone family protein compare
MMP_RS00185 -1.6 -5.9 potassium channel protein compare
MMP_RS06175 -1.5 -2.6 winged helix-turn-helix transcriptional regulator compare
MMP_RS05975 -1.5 -3.0 hypothetical protein compare
MMP_RS02470 -1.5 -0.9 helix-turn-helix transcriptional regulator compare
MMP_RS02110 -1.5 -0.8 hypothetical protein compare
MMP_RS08200 -1.5 -7.4 archaeosine synthase subunit alpha compare
MMP_RS06915 -1.5 -2.5 metallophosphoesterase compare
MMP_RS07615 -1.5 -3.3 energy-coupling factor ABC transporter permease compare
MMP_RS07625 -1.5 -2.0 cobalt ECF transporter T component CbiQ compare
MMP_RS08000 -1.5 -5.5 methyl coenzyme M reductase-arginine methyltransferase Mmp10 compare
MMP_RS08635 -1.4 -0.9 UbiA family prenyltransferase compare
MMP_RS02675 -1.4 -1.9 hypothetical protein compare
MMP_RS00110 -1.4 -1.4 hypothetical protein compare
MMP_RS03305 -1.4 -4.0 winged helix-turn-helix domain-containing protein compare
MMP_RS00685 -1.4 -1.4 2-phospho-L-lactate guanylyltransferase compare
MMP_RS03555 -1.4 -4.5 transcriptional regulator compare
MMP_RS07775 -1.4 -3.0 alanine dehydrogenase compare
MMP_RS00730 -1.3 -2.0 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS05550 -1.3 -0.4 cation:proton antiporter compare
MMP_RS02805 -1.3 -0.8 HEPN domain-containing protein compare
MMP_RS02875 -1.3 -3.2 chorismate pyruvate-lyase family protein compare
MMP_RS01085 -1.3 -0.9 hypothetical protein compare
MMP_RS07445 -1.3 -3.1 helix-turn-helix domain-containing protein compare
MMP_RS08750 -1.3 -1.1 hypothetical protein compare
MMP_RS05245 -1.3 -4.0 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS01720 -1.3 -1.2 replication factor C large subunit compare
MMP_RS05510 -1.3 -3.5 Rrf2 family transcriptional regulator compare
MMP_RS05930 -1.3 -1.0 3-isopropylmalate dehydratase large subunit compare
MMP_RS07525 -1.3 -3.8 4Fe-4S binding protein compare
MMP_RS03535 -1.2 -1.1 helix-turn-helix transcriptional regulator compare
MMP_RS06035 -1.2 -3.4 glycosyltransferase family 2 protein compare
MMP_RS08675 -1.2 -1.0 class III signal peptide-containing protein compare
MMP_RS08195 -1.2 -3.8 hypothetical protein compare
MMP_RS00675 -1.2 -0.5 nitroreductase family protein compare
MMP_RS06340 -1.2 -2.3 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS05060 -1.2 -4.8 AAA family ATPase compare
MMP_RS02240 -1.2 -1.1 methanogenesis marker 7 protein compare
MMP_RS05875 -1.2 -2.5 hydroxyethylthiazole kinase compare
MMP_RS00115 -1.2 -4.1 radical SAM protein compare
MMP_RS00570 -1.2 -1.4 protein-L-isoaspartate O-methyltransferase compare
MMP_RS02100 -1.2 -1.4 metallophosphoesterase compare
MMP_RS00310 -1.2 -3.8 CBS domain-containing protein compare
MMP_RS04985 -1.2 -3.5 DUF2180 family protein compare
MMP_RS08785 -1.1 -0.5 RNA-protein complex protein Nop10 compare
MMP_RS03025 -1.1 -1.6 molybdenum cofactor guanylyltransferase compare
MMP_RS06625 -1.1 -0.6 DNA primase compare
MMP_RS03250 -1.1 -1.4 MJ1244 family protein compare
MMP_RS08225 -1.1 -3.5 RimK family alpha-L-glutamate ligase compare
MMP_RS01265 -1.1 -1.2 hypothetical protein compare
MMP_RS05100 -1.1 -6.6 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMP_RS06430 -1.1 -2.1 6-carboxytetrahydropterin synthase QueD compare
MMP_RS01750 -1.1 -3.7 DUF63 family protein compare
MMP_RS01800 -1.1 -1.0 TIGR00303 family protein compare
MMP_RS01365 -1.1 -0.8 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS08650 -1.1 -1.1 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS03110 -1.1 -2.4 glycosyltransferase family 2 protein compare
MMP_RS02280 -1.0 -0.4 DUF211 domain-containing protein compare
MMP_RS00900 -1.0 -0.9 50S ribosomal protein L39e compare
MMP_RS01260 -1.0 -1.0 HDIG domain-containing protein compare
MMP_RS03020 -1.0 -1.8 peptidylprolyl isomerase compare
MMP_RS02225 -1.0 -2.4 carbohydrate kinase family protein compare
MMP_RS08615 -1.0 -0.9 flagellar protein G compare
MMP_RS01600 -1.0 -1.0 50S ribosomal protein L15e compare
MMP_RS02165 -1.0 -2.3 tRNA-dihydrouridine synthase compare
MMP_RS09010 -1.0 -4.3 hypothetical protein compare
MMP_RS03205 -1.0 -0.6 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS02690 -1.0 -2.0 FmdE family protein compare
MMP_RS05865 -1.0 -1.7 hypothetical protein compare
MMP_RS01675 -1.0 -0.7 hypothetical protein compare
MMP_RS00140 -1.0 -2.5 DUF192 domain-containing protein compare
MMP_RS03590 -1.0 -2.2 METTL5 family protein compare
MMP_RS04990 -1.0 -2.6 aquaporin family protein compare
MMP_RS01005 -1.0 -0.5 riboflavin synthase compare
MMP_RS08440 -1.0 -0.9 cell division protein SepF compare
MMP_RS04900 -1.0 -5.8 hypothetical protein compare
MMP_RS07540 -1.0 -0.9 CBS domain-containing protein compare
MMP_RS04520 -1.0 -1.0 nucleoside deaminase compare
MMP_RS06170 -1.0 -2.7 ABC transporter ATP-binding protein compare
MMP_RS04480 -1.0 -5.7 lysine 2 3-aminomutase compare
MMP_RS05250 -0.9 -0.7 NFYB/HAP3 family transcription factor subunit compare
MMP_RS07385 -0.9 -1.1 protein translocase SEC61 complex subunit gamma compare
MMP_RS06865 -0.9 -1.4 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS07200 -0.9 -1.9 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS04980 -0.9 -3.8 DUF2193 domain-containing protein compare
MMP_RS01570 -0.9 -0.7 hypothetical protein compare
MMP_RS08285 -0.9 -2.8 serine/threonine protein kinase compare
MMP_RS01140 -0.9 -1.1 molybdate ABC transporter permease subunit compare
MMP_RS01790 -0.9 -2.5 restriction endonuclease compare
MMP_RS07605 -0.9 -0.7 diadenylate cyclase compare
MMP_RS05075 -0.9 -4.1 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMP_RS08645 -0.9 -2.3 UPF0179 family protein compare
MMP_RS05085 -0.9 -2.7 AAA family ATPase compare
MMP_RS04780 -0.9 -1.0 ribonuclease P compare
MMP_RS01540 -0.9 -1.2 DUF504 domain-containing protein compare
MMP_RS03340 -0.9 -0.4 ABC transporter ATP-binding protein compare
MMP_RS02175 -0.9 -0.3 DUF1611 domain-containing protein compare
MMP_RS07730 -0.8 -0.6 pyruvate synthase subunit beta compare
MMP_RS06480 -0.8 -3.1 ABC transporter substrate-binding protein compare
MMP_RS06855 -0.8 -2.4 hypothetical protein compare
MMP_RS07700 -0.8 -2.8 DUF1188 domain-containing protein compare
MMP_RS02545 -0.8 -1.5 hypothetical protein compare
MMP_RS06605 -0.8 -2.8 DUF5814 domain-containing protein compare
MMP_RS06650 -0.8 -2.7 glycoside hydrolase family 57 protein compare
MMP_RS00455 -0.8 -2.2 orotate phosphoribosyltransferase-like protein compare
MMP_RS05020 -0.8 -1.4 hypothetical protein compare
MMP_RS07840 -0.8 -0.9 ribonuclease III compare
MMP_RS08315 -0.8 -1.2 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS05295 -0.8 -2.9 minichromosome maintenance protein MCM compare
MMP_RS05070 -0.8 -2.0 4Fe-4S dicluster domain-containing protein compare
MMP_RS02500 -0.8 -1.6 minichromosome maintenance protein MCM compare
MMP_RS05540 -0.8 -1.2 hypothetical protein compare
MMP_RS04090 -0.8 -0.8 hypothetical protein compare
MMP_RS02815 -0.8 -0.9 hypothetical protein compare
MMP_RS02145 -0.8 -2.5 winged helix-turn-helix transcriptional regulator compare
MMP_RS02985 -0.8 -1.0 hypothetical protein compare
MMP_RS07330 -0.8 -4.7 membrane protein compare
MMP_RS07365 -0.8 -2.5 2-phosphoglycerate kinase compare
MMP_RS02020 -0.8 -1.3 gamma-glutamylcyclotransferase compare
MMP_RS05080 -0.8 -3.4 acetyl-CoA decarbonylase/synthase complex subunit delta compare
MMP_RS00545 -0.8 -1.0 XRE family transcriptional regulator compare
MMP_RS03245 -0.8 -1.5 DNA repair and recombination protein RadB compare
MMP_RS01745 -0.8 -1.2 AMP phosphorylase compare
MMP_RS05290 -0.7 -2.9 TetR/AcrR family transcriptional regulator compare
MMP_RS00725 -0.7 -2.4 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS05090 -0.7 -2.6 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS00400 -0.7 -1.8 tributyrin esterase compare
MMP_RS03870 -0.7 -1.5 purine NTPase compare
MMP_RS05105 -0.7 -3.6 thymidylate synthase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress 3-nitroxypropanol across organisms