Experiment set14S740 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete Sodium sulfate 125 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS07605 -6.0 -2.2 diadenylate cyclase compare
MMP_RS06895 -5.8 -1.1 selenocysteine-specific translation elongation factor compare
MMP_RS02280 -5.3 -0.6 DUF211 domain-containing protein compare
MMP_RS02900 -4.5 -0.5 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS01500 -4.4 -1.5 CBS domain-containing protein compare
MMP_RS07380 -4.3 -1.9 transcription elongation factor Spt5 compare
MMP_RS01175 -4.3 -2.2 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS01325 -4.3 -1.7 dihydroneopterin aldolase family protein compare
MMP_RS08300 -4.2 -0.8 metal-sulfur cluster assembly factor compare
MMP_RS00515 -4.1 -0.7 DUF655 domain-containing protein compare
MMP_RS08715 -4.0 -1.3 formylmethanofuran dehydrogenase subunit B compare
MMP_RS05920 -4.0 -0.5 50S ribosomal protein L37e compare
MMP_RS07600 -3.7 -1.5 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS08435 -3.6 -1.7 Era-like GTP-binding protein compare
MMP_RS08210 -3.6 -1.5 phosphatidylglycerophosphatase A compare
MMP_RS03600 -3.4 -1.8 triose-phosphate isomerase compare
MMP_RS06230 -3.3 -2.1 helix-turn-helix domain-containing protein compare
MMP_RS04685 -3.2 -2.3 DUF126 domain-containing protein compare
MMP_RS03340 -3.2 -0.8 ABC transporter ATP-binding protein compare
MMP_RS08720 -3.1 -1.0 4Fe-4S binding protein compare
MMP_RS01755 -3.1 -0.7 DUF2097 domain-containing protein compare
MMP_RS01800 -3.1 -2.8 TIGR00303 family protein compare
MMP_RS03435 -3.0 -1.5 ketol-acid reductoisomerase compare
MMP_RS01700 -3.0 -0.7 dihydroxy-acid dehydratase compare
MMP_RS00110 -3.0 -2.1 hypothetical protein compare
MMP_RS07755 -2.9 -0.8 DUF555 domain-containing protein compare
MMP_RS07635 -2.8 -5.3 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS01020 -2.7 -0.6 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS03445 -2.7 -0.7 methanogenesis marker 17 protein compare
MMP_RS08820 -2.7 -4.3 hypothetical protein compare
MMP_RS06730 -2.7 -1.3 phosphopantothenate/pantothenate synthetase compare
MMP_RS04890 -2.7 -0.6 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS06015 -2.7 -6.3 flavodoxin family protein compare
MMP_RS03580 -2.6 -2.5 signal recognition particle-docking protein FtsY compare
MMP_RS07630 -2.6 -1.1 ATP-binding cassette domain-containing protein compare
MMP_RS06975 -2.6 -1.7 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS07765 -2.5 -7.4 sodium:alanine symporter family protein compare
MMP_RS06625 -2.5 -1.4 DNA primase compare
MMP_RS06725 -2.5 -9.4 hypothetical protein compare
MMP_RS07390 -2.4 -1.7 cell division protein FtsZ compare
MMP_RS06485 -2.4 -0.6 zinc ribbon domain-containing protein compare
MMP_RS03640 -2.4 -2.3 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS04485 -2.4 -10.4 putative beta-lysine N-acetyltransferase compare
MMP_RS01380 -2.4 -3.3 PHP domain-containing protein compare
MMP_RS04585 -2.4 -7.9 AIR synthase related protein compare
MMP_RS08645 -2.3 -5.8 UPF0179 family protein compare
MMP_RS01985 -2.3 -4.1 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS06295 -2.3 -4.3 methanogenesis marker 14 protein compare
MMP_RS07445 -2.3 -6.7 helix-turn-helix domain-containing protein compare
MMP_RS03960 -2.3 -0.6 hypothetical protein compare
MMP_RS07615 -2.2 -4.8 energy-coupling factor ABC transporter permease compare
MMP_RS01005 -2.2 -0.8 riboflavin synthase compare
MMP_RS01335 -2.2 -1.7 prefoldin subunit beta compare
MMP_RS08460 -2.2 -1.7 proteasome-activating nucleotidase compare
MMP_RS07620 -2.2 -3.7 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS00730 -2.1 -3.8 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS02875 -2.1 -7.7 chorismate pyruvate-lyase family protein compare
MMP_RS04480 -2.1 -12.8 lysine 2 3-aminomutase compare
MMP_RS03025 -2.1 -3.5 molybdenum cofactor guanylyltransferase compare
MMP_RS00305 -2.1 -1.2 phosphoribosyl-ATP diphosphatase compare
MMP_RS06885 -2.1 -1.7 50S ribosome-binding GTPase compare
MMP_RS00685 -2.1 -2.4 2-phospho-L-lactate guanylyltransferase compare
MMP_RS05835 -2.0 -0.5 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS03205 -2.0 -0.9 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS00900 -2.0 -1.2 50S ribosomal protein L39e compare
MMP_RS05765 -2.0 -3.6 M42 family metallopeptidase compare
MMP_RS03555 -2.0 -6.4 transcriptional regulator compare
MMP_RS00130 -2.0 -0.7 nickel-responsive transcriptional regulator NikR compare
MMP_RS05265 -2.0 -1.5 2-isopropylmalate synthase compare
MMP_RS07425 -2.0 -4.2 GTP-binding protein compare
MMP_RS07005 -1.9 -0.4 4Fe-4S binding protein compare
MMP_RS06475 -1.9 -3.1 FAD-dependent oxidoreductase compare
MMP_RS06900 -1.9 -1.9 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS07625 -1.9 -2.3 cobalt ECF transporter T component CbiQ compare
MMP_RS03315 -1.9 -0.8 ferrous iron transport protein A compare
MMP_RS07525 -1.9 -6.0 4Fe-4S binding protein compare
MMP_RS01085 -1.9 -1.2 hypothetical protein compare
MMP_RS09020 -1.8 -0.9 hypothetical protein compare
MMP_RS04780 -1.8 -1.9 ribonuclease P compare
MMP_RS07345 -1.8 -3.6 glycine synthesis protein GlyXL (from data) compare
MMP_RS06120 -1.8 -1.2 UPF0147 family protein compare
MMP_RS01610 -1.8 -1.6 hypothetical protein compare
MMP_RS08940 -1.8 -0.9 MetS family NSS transporter small subunit compare
MMP_RS07200 -1.8 -4.6 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS09055 -1.7 -0.6 CAP domain-containing protein compare
MMP_RS05430 -1.7 -3.1 TIGR00288 family NYN domain-containing protein compare
MMP_RS06855 -1.7 -5.7 hypothetical protein compare
MMP_RS02170 -1.7 -2.6 CBS domain-containing protein compare
MMP_RS00850 -1.7 -3.6 TIGR01177 family methyltransferase compare
MMP_RS06175 -1.7 -4.7 winged helix-turn-helix transcriptional regulator compare
MMP_RS01225 -1.7 -3.1 DUF5379 domain-containing protein compare
MMP_RS07700 -1.7 -6.8 DUF1188 domain-containing protein compare
MMP_RS06020 -1.7 -2.4 archaeoflavoprotein AfpA compare
MMP_RS05245 -1.7 -6.6 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS00725 -1.7 -5.5 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS02815 -1.6 -1.6 hypothetical protein compare
MMP_RS06340 -1.6 -4.9 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS00295 -1.6 -1.1 gamma carbonic anhydrase family protein compare
MMP_RS00895 -1.6 -2.0 hypothetical protein compare
MMP_RS00115 -1.6 -7.2 radical SAM protein compare
MMP_RS07875 -1.6 -3.8 hypothetical protein compare
MMP_RS00315 -1.6 -3.8 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS07365 -1.5 -6.2 2-phosphoglycerate kinase compare
MMP_RS02930 -1.5 -1.9 class I SAM-dependent methyltransferase compare
MMP_RS00320 -1.5 -1.0 class I SAM-dependent methyltransferase compare
MMP_RS05830 -1.5 -1.7 peptidyl-prolyl cis-trans isomerase compare
MMP_RS06285 -1.5 -1.0 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS05815 -1.5 -1.1 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS01265 -1.5 -1.5 hypothetical protein compare
MMP_RS05845 -1.4 -0.9 tRNA-intron lyase compare
MMP_RS03910 -1.4 -1.3 hypothetical protein compare
MMP_RS05540 -1.4 -2.6 hypothetical protein compare
MMP_RS02165 -1.4 -5.2 tRNA-dihydrouridine synthase compare
MMP_RS05020 -1.4 -2.7 hypothetical protein compare
MMP_RS02240 -1.4 -1.6 methanogenesis marker 7 protein compare
MMP_RS06110 -1.4 -2.2 ATP-dependent protease LonB compare
MMP_RS07385 -1.4 -1.6 protein translocase SEC61 complex subunit gamma compare
MMP_RS05250 -1.4 -1.8 NFYB/HAP3 family transcription factor subunit compare
MMP_RS06400 -1.3 -0.6 4Fe-4S binding protein compare
MMP_RS00555 -1.3 -2.5 MFS transporter compare
MMP_RS07775 -1.3 -2.7 alanine dehydrogenase compare
MMP_RS04990 -1.3 -4.6 aquaporin family protein compare
MMP_RS06930 -1.3 -6.3 MBL fold metallo-hydrolase compare
MMP_RS05875 -1.3 -2.4 hydroxyethylthiazole kinase compare
MMP_RS01980 -1.3 -6.8 trimeric intracellular cation channel family protein compare
MMP_RS07355 -1.3 -0.5 transcription factor S compare
MMP_RS00735 -1.3 -2.1 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS06680 -1.3 -4.9 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS06840 -1.2 -0.5 DNA-directed RNA polymerase subunit N compare
MMP_RS08200 -1.2 -8.0 archaeosine synthase subunit alpha compare
MMP_RS00520 -1.2 -0.8 RNA polymerase Rpb4 family protein compare
MMP_RS08225 -1.2 -4.0 RimK family alpha-L-glutamate ligase compare
MMP_RS02195 -1.2 -1.7 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS06600 -1.2 -0.5 class III signal peptide-containing protein compare
MMP_RS01830 -1.2 -0.8 tRNA-Val compare
MMP_RS07535 -1.2 -4.1 4Fe-4S binding protein compare
MMP_RS01110 -1.2 -1.6 FmdE family protein compare
MMP_RS01600 -1.2 -1.6 50S ribosomal protein L15e compare
MMP_RS02110 -1.2 -1.1 hypothetical protein compare
MMP_RS03400 -1.2 -1.2 archease compare
MMP_RS04850 -1.2 -7.0 UPF0254 family protein compare
MMP_RS02745 -1.2 -0.9 hypothetical protein compare
MMP_RS03535 -1.2 -1.4 helix-turn-helix transcriptional regulator compare
MMP_RS03020 -1.1 -2.8 peptidylprolyl isomerase compare
MMP_RS01655 -1.1 -1.4 DsrE family protein compare
MMP_RS08555 -1.1 -2.2 hypothetical protein compare
MMP_RS03680 -1.1 -3.0 hypothetical protein compare
MMP_RS02995 -1.1 -2.7 acyl-CoA thioesterase compare
MMP_RS03095 -1.1 -2.8 diphthine synthase compare
MMP_RS05510 -1.1 -2.6 Rrf2 family transcriptional regulator compare
MMP_RS01495 -1.1 -4.7 TraB/GumN family protein compare
MMP_RS03440 -1.1 -0.6 MoaD/ThiS family protein compare
MMP_RS06605 -1.1 -4.4 DUF5814 domain-containing protein compare
MMP_RS06270 -1.1 -2.1 TIGR00300 family protein compare
MMP_RS07880 -1.1 -3.5 AAA family ATPase compare
MMP_RS01250 -1.1 -4.1 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS07115 -1.1 -2.6 MBL fold metallo-hydrolase compare
MMP_RS05420 -1.1 -2.2 DUF61 family protein compare
MMP_RS05865 -1.1 -1.4 hypothetical protein compare
MMP_RS02225 -1.1 -3.6 carbohydrate kinase family protein compare
MMP_RS08790 -1.1 -1.2 translation initiation factor IF-2 subunit alpha compare
MMP_RS03560 -1.1 -6.6 Na+/H+ antiporter NhaC family protein compare
MMP_RS06940 -1.1 -1.7 polyprenyl diphosphate synthase compare
MMP_RS06525 -1.1 -0.6 YciI family protein compare
MMP_RS06200 -1.1 -3.4 M24 family metallopeptidase compare
MMP_RS05100 -1.0 -6.4 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMP_RS00290 -1.0 -2.9 hypothetical protein compare
MMP_RS00710 -1.0 -2.0 hypothetical protein compare
MMP_RS05545 -1.0 -2.7 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS05095 -1.0 -3.0 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMP_RS06395 -1.0 -1.9 ThiF family adenylyltransferase compare
MMP_RS05290 -1.0 -3.0 TetR/AcrR family transcriptional regulator compare
MMP_RS03765 -1.0 -2.3 CopG family ribbon-helix-helix protein compare
MMP_RS05800 -1.0 -2.6 B12-binding domain-containing radical SAM protein compare
MMP_RS04775 -1.0 -1.3 adenosylhomocysteinase compare
MMP_RS05090 -1.0 -3.3 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS08930 -1.0 -0.9 hypothetical protein compare
MMP_RS07575 -1.0 -1.8 RNA ligase partner protein compare
MMP_RS00620 -1.0 -2.4 4Fe-4S binding protein compare
MMP_RS06905 -1.0 -1.0 hypothetical protein compare
MMP_RS07185 -0.9 -3.3 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS03145 -0.9 -1.8 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS01275 -0.9 -1.8 class III signal peptide-containing protein compare
MMP_RS00050 -0.9 -2.3 AarF/UbiB family protein compare
MMP_RS05075 -0.9 -4.6 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMP_RS01075 -0.9 -0.8 hypothetical protein compare
MMP_RS09010 -0.9 -3.1 hypothetical protein compare
MMP_RS07750 -0.9 -2.0 DUF357 domain-containing protein compare
MMP_RS07530 -0.9 -3.5 4Fe-4S binding protein compare
MMP_RS06915 -0.9 -2.0 metallophosphoesterase compare
MMP_RS05550 -0.9 -0.3 cation:proton antiporter compare
MMP_RS08995 -0.9 -0.6 hypothetical protein compare
MMP_RS08830 -0.9 -2.3 GTP-binding protein compare
MMP_RS05285 -0.9 -2.4 MMPL family transporter compare
MMP_RS00155 -0.9 -1.6 heavy metal-binding domain-containing protein compare
MMP_RS04900 -0.9 -5.2 hypothetical protein compare
MMP_RS04420 -0.8 -2.4 LysE family translocator compare
MMP_RS03350 -0.8 -1.4 winged helix-turn-helix domain-containing protein compare
MMP_RS01320 -0.8 -1.8 hypothetical protein compare
MMP_RS05970 -0.8 -1.9 class II SORL domain-containing protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress Sodium sulfate across organisms