Experiment set14S731 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete sodium nitrite 0.416666666666667 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS01500 -7.2 -1.4 CBS domain-containing protein compare
MMP_RS07845 -6.5 -1.2 LL-diaminopimelate aminotransferase compare
MMP_RS09020 -5.9 -1.1 hypothetical protein compare
MMP_RS03445 -5.8 -0.6 methanogenesis marker 17 protein compare
MMP_RS03960 -5.4 -0.6 hypothetical protein compare
MMP_RS02175 -5.3 -0.6 DUF1611 domain-containing protein compare
MMP_RS06625 -4.8 -1.4 DNA primase compare
MMP_RS03435 -4.7 -1.4 ketol-acid reductoisomerase compare
MMP_RS02900 -4.6 -0.5 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS08790 -4.5 -1.6 translation initiation factor IF-2 subunit alpha compare
MMP_RS01005 -4.4 -0.7 riboflavin synthase compare
MMP_RS00320 -4.4 -0.9 class I SAM-dependent methyltransferase compare
MMP_RS08460 -4.4 -2.0 proteasome-activating nucleotidase compare
MMP_RS05815 -4.3 -1.7 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS02240 -4.2 -2.1 methanogenesis marker 7 protein compare
MMP_RS06285 -4.2 -1.5 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS08300 -4.2 -0.8 metal-sulfur cluster assembly factor compare
MMP_RS07005 -4.2 -0.5 4Fe-4S binding protein compare
MMP_RS01755 -4.1 -0.6 DUF2097 domain-containing protein compare
MMP_RS08715 -4.1 -1.2 formylmethanofuran dehydrogenase subunit B compare
MMP_RS05920 -4.1 -0.4 50S ribosomal protein L37e compare
MMP_RS07355 -4.1 -0.6 transcription factor S compare
MMP_RS08820 -4.1 -4.2 hypothetical protein compare
MMP_RS06020 -4.0 -3.9 archaeoflavoprotein AfpA compare
MMP_RS00300 -4.0 -0.4 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS07385 -4.0 -1.7 protein translocase SEC61 complex subunit gamma compare
MMP_RS00305 -3.9 -1.3 phosphoribosyl-ATP diphosphatase compare
MMP_RS07620 -3.8 -3.5 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS07625 -3.8 -2.5 cobalt ECF transporter T component CbiQ compare
MMP_RS06230 -3.7 -2.1 helix-turn-helix domain-containing protein compare
MMP_RS01700 -3.7 -0.6 dihydroxy-acid dehydratase compare
MMP_RS07615 -3.7 -6.0 energy-coupling factor ABC transporter permease compare
MMP_RS04890 -3.6 -0.6 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS00895 -3.6 -2.6 hypothetical protein compare
MMP_RS08650 -3.5 -2.6 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS03600 -3.5 -1.7 triose-phosphate isomerase compare
MMP_RS03640 -3.5 -2.6 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS08645 -3.4 -6.0 UPF0179 family protein compare
MMP_RS03315 -3.4 -0.9 ferrous iron transport protein A compare
MMP_RS07630 -3.4 -1.2 ATP-binding cassette domain-containing protein compare
MMP_RS07635 -3.3 -5.9 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS03340 -3.2 -0.8 ABC transporter ATP-binding protein compare
MMP_RS07380 -3.2 -1.6 transcription elongation factor Spt5 compare
MMP_RS08720 -3.2 -1.0 4Fe-4S binding protein compare
MMP_RS03580 -3.1 -2.3 signal recognition particle-docking protein FtsY compare
MMP_RS08595 -3.0 -0.6 flagellar protein C compare
MMP_RS06295 -3.0 -4.8 methanogenesis marker 14 protein compare
MMP_RS01175 -2.9 -2.0 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS02875 -2.9 -7.4 chorismate pyruvate-lyase family protein compare
MMP_RS04710 -2.9 -1.2 hypothetical protein compare
MMP_RS01795 -2.9 -1.0 methanogenesis marker 6 protein compare
MMP_RS06120 -2.9 -1.6 UPF0147 family protein compare
MMP_RS01020 -2.8 -0.6 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS06975 -2.7 -1.5 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS00520 -2.7 -1.1 RNA polymerase Rpb4 family protein compare
MMP_RS02280 -2.7 -0.6 DUF211 domain-containing protein compare
MMP_RS01325 -2.6 -1.4 dihydroneopterin aldolase family protein compare
MMP_RS04685 -2.6 -2.1 DUF126 domain-containing protein compare
MMP_RS00110 -2.6 -1.9 hypothetical protein compare
MMP_RS06400 -2.6 -1.0 4Fe-4S binding protein compare
MMP_RS04585 -2.6 -8.2 AIR synthase related protein compare
MMP_RS06725 -2.6 -5.0 hypothetical protein compare
MMP_RS08210 -2.6 -1.3 phosphatidylglycerophosphatase A compare
MMP_RS04775 -2.6 -2.2 adenosylhomocysteinase compare
MMP_RS07600 -2.6 -1.5 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS07445 -2.5 -5.3 helix-turn-helix domain-containing protein compare
MMP_RS02165 -2.5 -6.5 tRNA-dihydrouridine synthase compare
MMP_RS06270 -2.5 -3.9 TIGR00300 family protein compare
MMP_RS03025 -2.5 -4.0 molybdenum cofactor guanylyltransferase compare
MMP_RS01225 -2.4 -3.5 DUF5379 domain-containing protein compare
MMP_RS06730 -2.4 -1.2 phosphopantothenate/pantothenate synthetase compare
MMP_RS00130 -2.4 -0.8 nickel-responsive transcriptional regulator NikR compare
MMP_RS05875 -2.3 -3.4 hydroxyethylthiazole kinase compare
MMP_RS00725 -2.3 -6.4 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS09055 -2.3 -0.7 CAP domain-containing protein compare
MMP_RS00730 -2.3 -3.8 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS01610 -2.2 -1.8 hypothetical protein compare
MMP_RS03840 -2.2 -2.5 hypothetical protein compare
MMP_RS07765 -2.2 -8.4 sodium:alanine symporter family protein compare
MMP_RS07200 -2.2 -3.9 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS01380 -2.2 -3.1 PHP domain-containing protein compare
MMP_RS06015 -2.2 -3.4 flavodoxin family protein compare
MMP_RS07525 -2.1 -5.2 4Fe-4S binding protein compare
MMP_RS01800 -2.1 -2.2 TIGR00303 family protein compare
MMP_RS01665 -2.1 -2.7 DUF2111 domain-containing protein compare
MMP_RS00735 -2.1 -2.7 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS05430 -2.1 -2.4 TIGR00288 family NYN domain-containing protein compare
MMP_RS05355 -2.1 -0.6 hypothetical protein compare
MMP_RS01540 -2.0 -1.8 DUF504 domain-containing protein compare
MMP_RS00515 -2.0 -0.6 DUF655 domain-containing protein compare
MMP_RS00570 -2.0 -1.9 protein-L-isoaspartate O-methyltransferase compare
MMP_RS08435 -2.0 -1.3 Era-like GTP-binding protein compare
MMP_RS01385 -2.0 -0.4 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS03555 -1.9 -5.5 transcriptional regulator compare
MMP_RS08940 -1.9 -0.9 MetS family NSS transporter small subunit compare
MMP_RS03035 -1.9 -2.7 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS07425 -1.9 -3.8 GTP-binding protein compare
MMP_RS02110 -1.9 -1.4 hypothetical protein compare
MMP_RS01335 -1.9 -1.5 prefoldin subunit beta compare
MMP_RS01720 -1.8 -1.2 replication factor C large subunit compare
MMP_RS07555 -1.8 -0.5 monovalent cation/H+ antiporter subunit E compare
MMP_RS05245 -1.8 -6.6 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS05845 -1.8 -0.9 tRNA-intron lyase compare
MMP_RS06895 -1.8 -0.7 selenocysteine-specific translation elongation factor compare
MMP_RS07115 -1.8 -2.9 MBL fold metallo-hydrolase compare
MMP_RS07365 -1.7 -6.7 2-phosphoglycerate kinase compare
MMP_RS06630 -1.7 -0.4 UPF0058 family protein compare
MMP_RS07700 -1.7 -5.1 DUF1188 domain-containing protein compare
MMP_RS05540 -1.7 -2.4 hypothetical protein compare
MMP_RS00685 -1.7 -1.8 2-phospho-L-lactate guanylyltransferase compare
MMP_RS06340 -1.6 -4.8 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS07775 -1.6 -2.8 alanine dehydrogenase compare
MMP_RS03400 -1.6 -1.5 archease compare
MMP_RS06315 -1.6 -0.5 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS04780 -1.6 -1.5 ribonuclease P compare
MMP_RS00115 -1.6 -6.6 radical SAM protein compare
MMP_RS04870 -1.5 -2.8 TIGR02253 family HAD-type hydrolase compare
MMP_RS03800 -1.5 -2.1 hypothetical protein compare
MMP_RS02470 -1.5 -0.9 helix-turn-helix transcriptional regulator compare
MMP_RS05250 -1.5 -2.0 NFYB/HAP3 family transcription factor subunit compare
MMP_RS06920 -1.5 -5.5 AAA family ATPase compare
MMP_RS05090 -1.5 -4.2 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS02235 -1.4 -5.4 CBS domain-containing protein compare
MMP_RS06900 -1.4 -1.5 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS07730 -1.4 -0.8 pyruvate synthase subunit beta compare
MMP_RS01365 -1.4 -1.5 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS05060 -1.4 -4.7 AAA family ATPase compare
MMP_RS08310 -1.4 -1.0 TMEM165/GDT1 family protein compare
MMP_RS05095 -1.3 -2.9 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMP_RS04990 -1.3 -3.3 aquaporin family protein compare
MMP_RS06110 -1.3 -1.9 ATP-dependent protease LonB compare
MMP_RS06855 -1.3 -5.2 hypothetical protein compare
MMP_RS00385 -1.3 -2.0 P-II family nitrogen regulator compare
MMP_RS06395 -1.3 -1.5 ThiF family adenylyltransferase compare
MMP_RS00155 -1.3 -2.1 heavy metal-binding domain-containing protein compare
MMP_RS06940 -1.3 -1.8 polyprenyl diphosphate synthase compare
MMP_RS06325 -1.3 -0.8 hypothetical protein compare
MMP_RS06925 -1.3 -1.1 ribonuclease VapC4 compare
MMP_RS00710 -1.3 -2.7 hypothetical protein compare
MMP_RS04985 -1.3 -3.1 DUF2180 family protein compare
MMP_RS08290 -1.3 -3.2 DNA-binding protein Alba compare
MMP_RS05100 -1.3 -7.2 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMP_RS03490 -1.3 -0.9 DUF2115 domain-containing protein compare
MMP_RS01250 -1.3 -3.1 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS06175 -1.3 -1.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS07695 -1.3 -2.7 DUF3236 domain-containing protein compare
MMP_RS06200 -1.2 -4.0 M24 family metallopeptidase compare
MMP_RS02135 -1.2 -1.8 DUF5612 domain-containing protein compare
MMP_RS02935 -1.2 -1.6 A24 family peptidase compare
MMP_RS00040 -1.2 -3.2 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS01655 -1.2 -1.2 DsrE family protein compare
MMP_RS02340 -1.2 -1.2 DNA-directed RNA polymerase subunit E'' compare
MMP_RS05085 -1.2 -5.2 AAA family ATPase compare
MMP_RS07540 -1.2 -1.6 CBS domain-containing protein compare
MMP_RS08195 -1.2 -3.1 hypothetical protein compare
MMP_RS05795 -1.2 -1.8 redox-regulated ATPase YchF compare
MMP_RS03350 -1.2 -1.8 winged helix-turn-helix domain-containing protein compare
MMP_RS08675 -1.1 -1.6 class III signal peptide-containing protein compare
MMP_RS05635 -1.1 -3.3 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS07880 -1.1 -3.4 AAA family ATPase compare
MMP_RS04850 -1.1 -5.6 UPF0254 family protein compare
MMP_RS04740 -1.1 -1.8 DUF473 domain-containing protein compare
MMP_RS06970 -1.1 -3.0 ribosomal protein S18-alanine N-acetyltransferase compare
MMP_RS04980 -1.1 -5.8 DUF2193 domain-containing protein compare
MMP_RS05070 -1.1 -3.2 4Fe-4S dicluster domain-containing protein compare
MMP_RS02995 -1.1 -2.1 acyl-CoA thioesterase compare
MMP_RS01980 -1.1 -4.7 trimeric intracellular cation channel family protein compare
MMP_RS00620 -1.1 -3.3 4Fe-4S binding protein compare
MMP_RS05075 -1.1 -5.2 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMP_RS04275 -1.1 -4.1 hydrogenase iron-sulfur subunit compare
MMP_RS08670 -1.1 -2.3 metallophosphoesterase compare
MMP_RS02815 -1.0 -1.3 hypothetical protein compare
MMP_RS00540 -1.0 -1.9 PLP-dependent aminotransferase family protein compare
MMP_RS05080 -1.0 -4.6 acetyl-CoA decarbonylase/synthase complex subunit delta compare
MMP_RS05865 -1.0 -1.6 hypothetical protein compare
MMP_RS08600 -1.0 -1.1 flagellar protein D compare
MMP_RS01570 -1.0 -0.7 hypothetical protein compare
MMP_RS02495 -1.0 -1.3 hypothetical protein compare
MMP_RS03140 -1.0 -3.1 hypothetical protein compare
MMP_RS00185 -1.0 -4.1 potassium channel protein compare
MMP_RS04265 -1.0 -1.2 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS02245 -1.0 -1.3 hypothetical protein compare
MMP_RS01785 -1.0 -3.1 hypothetical protein compare
MMP_RS05990 -0.9 -1.4 DsrE family protein compare
MMP_RS03305 -0.9 -2.5 winged helix-turn-helix domain-containing protein compare
MMP_RS00695 -0.9 -0.3 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS03110 -0.9 -1.7 glycosyltransferase family 2 protein compare
MMP_RS05545 -0.9 -1.7 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS01985 -0.9 -1.9 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS06035 -0.9 -2.6 glycosyltransferase family 2 protein compare
MMP_RS05055 -0.9 -4.2 DUF166 domain-containing protein compare
MMP_RS01495 -0.9 -2.1 TraB/GumN family protein compare
MMP_RS03095 -0.9 -2.2 diphthine synthase compare
MMP_RS02690 -0.9 -2.0 FmdE family protein compare
MMP_RS08570 -0.9 -3.3 coenzyme F420-0:L-glutamate ligase compare
MMP_RS05675 -0.8 -1.1 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS01030 -0.8 -1.2 MTAP family purine nucleoside phosphorylase compare
MMP_RS03550 -0.8 -0.9 DUF2124 domain-containing protein compare
MMP_RS01440 -0.8 -1.5 NAAT family transporter compare
MMP_RS08200 -0.8 -3.8 archaeosine synthase subunit alpha compare


Specific Phenotypes

For 2 genes in this experiment

For stress Sodium nitrite in Methanococcus maripaludis S2

For stress Sodium nitrite across organisms