Experiment set14S728 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete Sodium selenate 31.25 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS01500 -7.8 -2.7 CBS domain-containing protein compare
MMP_RS06120 -7.1 -2.8 UPF0147 family protein compare
MMP_RS08635 -5.4 -2.6 UbiA family prenyltransferase compare
MMP_RS03400 -5.3 -3.6 archease compare
MMP_RS01325 -5.0 -2.7 dihydroneopterin aldolase family protein compare
MMP_RS08720 -5.0 -2.0 4Fe-4S binding protein compare
MMP_RS02900 -4.8 -1.0 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS06400 -4.7 -2.1 4Fe-4S binding protein compare
MMP_RS01755 -4.5 -1.3 DUF2097 domain-containing protein compare
MMP_RS03445 -4.5 -1.3 methanogenesis marker 17 protein compare
MMP_RS01020 -4.2 -1.2 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS02240 -4.2 -3.9 methanogenesis marker 7 protein compare
MMP_RS01700 -4.1 -1.2 dihydroxy-acid dehydratase compare
MMP_RS03435 -4.1 -2.7 ketol-acid reductoisomerase compare
MMP_RS03600 -4.0 -2.9 triose-phosphate isomerase compare
MMP_RS04890 -3.9 -1.1 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS03025 -3.7 -5.5 molybdenum cofactor guanylyltransferase compare
MMP_RS08650 -3.7 -3.5 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS03015 -3.5 -7.4 GTP 3' 8-cyclase MoaA compare
MMP_RS08715 -3.5 -2.2 formylmethanofuran dehydrogenase subunit B compare
MMP_RS08790 -3.4 -3.1 translation initiation factor IF-2 subunit alpha compare
MMP_RS00695 -3.4 -1.0 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS06285 -3.4 -2.2 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS04585 -3.2 -8.1 AIR synthase related protein compare
MMP_RS06295 -3.2 -5.3 methanogenesis marker 14 protein compare
MMP_RS09020 -3.1 -2.0 hypothetical protein compare
MMP_RS01610 -3.1 -2.9 hypothetical protein compare
MMP_RS06350 -3.0 -6.1 HesA/MoeB/ThiF family protein compare
MMP_RS06230 -3.0 -2.9 helix-turn-helix domain-containing protein compare
MMP_RS06730 -2.9 -2.0 phosphopantothenate/pantothenate synthetase compare
MMP_RS08820 -2.9 -6.1 hypothetical protein compare
MMP_RS08300 -2.8 -1.6 metal-sulfur cluster assembly factor compare
MMP_RS00300 -2.8 -0.8 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS00515 -2.8 -1.2 DUF655 domain-containing protein compare
MMP_RS07605 -2.7 -3.2 diadenylate cyclase compare
MMP_RS08460 -2.7 -2.3 proteasome-activating nucleotidase compare
MMP_RS04710 -2.7 -1.7 hypothetical protein compare
MMP_RS02875 -2.7 -7.1 chorismate pyruvate-lyase family protein compare
MMP_RS07635 -2.7 -5.3 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS03110 -2.6 -5.6 glycosyltransferase family 2 protein compare
MMP_RS00895 -2.5 -3.6 hypothetical protein compare
MMP_RS05515 -2.5 -6.1 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS00115 -2.5 -8.7 radical SAM protein compare
MMP_RS05245 -2.5 -10.0 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS06680 -2.4 -7.5 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS01800 -2.3 -3.3 TIGR00303 family protein compare
MMP_RS06625 -2.3 -2.1 DNA primase compare
MMP_RS07600 -2.3 -2.4 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS08645 -2.2 -8.8 UPF0179 family protein compare
MMP_RS02195 -2.2 -2.7 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS01225 -2.2 -3.6 DUF5379 domain-containing protein compare
MMP_RS08745 -2.2 -4.4 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS08435 -2.2 -2.3 Era-like GTP-binding protein compare
MMP_RS02280 -2.2 -1.1 DUF211 domain-containing protein compare
MMP_RS07525 -2.2 -4.8 4Fe-4S binding protein compare
MMP_RS07445 -2.2 -5.1 helix-turn-helix domain-containing protein compare
MMP_RS06340 -2.1 -6.6 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS06940 -2.1 -2.7 polyprenyl diphosphate synthase compare
MMP_RS03315 -2.1 -1.1 ferrous iron transport protein A compare
MMP_RS05250 -2.1 -4.0 NFYB/HAP3 family transcription factor subunit compare
MMP_RS03640 -2.1 -3.0 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS07630 -2.1 -2.1 ATP-binding cassette domain-containing protein compare
MMP_RS08200 -2.0 -11.9 archaeosine synthase subunit alpha compare
MMP_RS04685 -2.0 -2.7 DUF126 domain-containing protein compare
MMP_RS06685 -2.0 -5.4 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS05430 -2.0 -3.7 TIGR00288 family NYN domain-containing protein compare
MMP_RS06895 -2.0 -1.6 selenocysteine-specific translation elongation factor compare
MMP_RS06355 -2.0 -1.9 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS06345 -2.0 -5.1 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS04780 -2.0 -2.2 ribonuclease P compare
MMP_RS07385 -2.0 -1.8 protein translocase SEC61 complex subunit gamma compare
MMP_RS00810 -1.9 -5.7 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS07735 -1.9 -0.9 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS06885 -1.9 -2.2 50S ribosome-binding GTPase compare
MMP_RS00130 -1.9 -1.4 nickel-responsive transcriptional regulator NikR compare
MMP_RS07390 -1.9 -2.4 cell division protein FtsZ compare
MMP_RS03440 -1.9 -1.4 MoaD/ThiS family protein compare
MMP_RS07860 -1.8 -0.8 hypothetical protein compare
MMP_RS06630 -1.7 -0.8 UPF0058 family protein compare
MMP_RS01175 -1.7 -1.9 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS06600 -1.7 -1.5 class III signal peptide-containing protein compare
MMP_RS02145 -1.7 -4.7 winged helix-turn-helix transcriptional regulator compare
MMP_RS06270 -1.6 -3.3 TIGR00300 family protein compare
MMP_RS03205 -1.6 -1.7 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS05345 -1.6 -3.2 hypothetical protein compare
MMP_RS09055 -1.6 -1.1 CAP domain-containing protein compare
MMP_RS07200 -1.6 -3.5 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS02235 -1.5 -7.5 CBS domain-containing protein compare
MMP_RS06855 -1.5 -5.8 hypothetical protein compare
MMP_RS08675 -1.5 -3.6 class III signal peptide-containing protein compare
MMP_RS00685 -1.5 -2.1 2-phospho-L-lactate guanylyltransferase compare
MMP_RS05550 -1.5 -0.7 cation:proton antiporter compare
MMP_RS06035 -1.5 -5.7 glycosyltransferase family 2 protein compare
MMP_RS06975 -1.5 -1.9 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS06700 -1.4 -5.3 hypothetical protein compare
MMP_RS06475 -1.4 -2.3 FAD-dependent oxidoreductase compare
MMP_RS07685 -1.4 -5.1 TIGR01212 family radical SAM protein compare
MMP_RS08860 -1.4 -4.2 MinD/ParA family protein compare
MMP_RS07845 -1.4 -1.2 LL-diaminopimelate aminotransferase compare
MMP_RS03095 -1.4 -5.5 diphthine synthase compare
MMP_RS00110 -1.3 -1.5 hypothetical protein compare
MMP_RS02800 -1.3 -3.7 nucleotidyltransferase domain-containing protein compare
MMP_RS07625 -1.3 -2.0 cobalt ECF transporter T component CbiQ compare
MMP_RS00310 -1.3 -7.7 CBS domain-containing protein compare
MMP_RS07380 -1.3 -2.0 transcription elongation factor Spt5 compare
MMP_RS04775 -1.3 -1.9 adenosylhomocysteinase compare
MMP_RS03475 -1.3 -0.6 hypothetical protein compare
MMP_RS07580 -1.3 -1.3 DUF356 domain-containing protein compare
MMP_RS03340 -1.3 -1.1 ABC transporter ATP-binding protein compare
MMP_RS07710 -1.3 -5.3 cell division protein FtsZ compare
MMP_RS03580 -1.3 -1.6 signal recognition particle-docking protein FtsY compare
MMP_RS01545 -1.3 -1.0 CBS domain-containing protein compare
MMP_RS05815 -1.3 -1.6 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS01385 -1.3 -0.6 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS02230 -1.3 -5.7 sodium-dependent transporter compare
MMP_RS01250 -1.2 -2.4 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS00305 -1.2 -1.4 phosphoribosyl-ATP diphosphatase compare
MMP_RS05445 -1.2 -5.1 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS07615 -1.2 -4.4 energy-coupling factor ABC transporter permease compare
MMP_RS01365 -1.2 -3.3 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS02165 -1.2 -5.2 tRNA-dihydrouridine synthase compare
MMP_RS07545 -1.2 -0.9 HTH domain-containing protein compare
MMP_RS07620 -1.2 -2.7 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS01280 -1.2 -7.4 DUF515 domain-containing protein compare
MMP_RS00725 -1.2 -4.3 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS01335 -1.2 -1.3 prefoldin subunit beta compare
MMP_RS01285 -1.2 -7.5 hypothetical protein compare
MMP_RS08440 -1.2 -1.8 cell division protein SepF compare
MMP_RS01830 -1.2 -1.1 tRNA-Val compare
MMP_RS08855 -1.1 -6.8 hypothetical protein compare
MMP_RS02135 -1.1 -2.1 DUF5612 domain-containing protein compare
MMP_RS07755 -1.1 -1.1 DUF555 domain-containing protein compare
MMP_RS00250 -1.1 -7.6 Flp pilus assembly complex ATPase component TadA compare
MMP_RS06020 -1.1 -2.7 archaeoflavoprotein AfpA compare
MMP_RS05765 -1.1 -4.9 M42 family metallopeptidase compare
MMP_RS05635 -1.1 -4.7 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS05265 -1.1 -1.9 2-isopropylmalate synthase compare
MMP_RS01005 -1.1 -0.9 riboflavin synthase compare
MMP_RS06925 -1.1 -1.1 ribonuclease VapC4 compare
MMP_RS01720 -1.1 -1.2 replication factor C large subunit compare
MMP_RS08165 -1.1 -1.4 phosphoglycerate dehydrogenase compare
MMP_RS05540 -1.1 -2.4 hypothetical protein compare
MMP_RS06105 -1.1 -3.6 hydrogenase maturation peptidase HycI compare
MMP_RS04090 -1.0 -2.0 hypothetical protein compare
MMP_RS07765 -1.0 -3.5 sodium:alanine symporter family protein compare
MMP_RS02100 -1.0 -3.5 metallophosphoesterase compare
MMP_RS00240 -1.0 -6.7 type II secretion system F family protein compare
MMP_RS07330 -1.0 -7.7 membrane protein compare
MMP_RS01290 -1.0 -5.4 class III signal peptide-containing protein compare
MMP_RS03125 -1.0 -5.3 cell division ATPase MinD compare
MMP_RS01085 -1.0 -1.6 hypothetical protein compare
MMP_RS00040 -1.0 -2.9 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS03470 -1.0 -5.3 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS06865 -1.0 -1.1 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS01305 -1.0 -7.5 hypothetical protein compare
MMP_RS07005 -1.0 -0.5 4Fe-4S binding protein compare
MMP_RS06200 -1.0 -4.4 M24 family metallopeptidase compare
MMP_RS01270 -1.0 -6.8 prepilin peptidase compare
MMP_RS02930 -1.0 -2.1 class I SAM-dependent methyltransferase compare
MMP_RS00315 -1.0 -5.2 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS00245 -1.0 -7.6 type II secretion system F family protein compare
MMP_RS03210 -0.9 -6.0 tRNA guanosine(15) transglycosylase TgtA compare
MMP_RS01840 -0.9 -3.5 TIGR00289 family protein compare
MMP_RS04485 -0.9 -5.3 putative beta-lysine N-acetyltransferase compare
MMP_RS07365 -0.9 -4.8 2-phosphoglycerate kinase compare
MMP_RS01985 -0.9 -2.9 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS03550 -0.9 -1.8 DUF2124 domain-containing protein compare
MMP_RS05925 -0.9 -2.1 small nuclear ribonucleoprotein compare
MMP_RS01295 -0.9 -4.8 hypothetical protein compare
MMP_RS07090 -0.9 -4.0 tRNA (adenine-N1)-methyltransferase compare
MMP_RS01310 -0.9 -6.1 hypothetical protein compare
MMP_RS01180 -0.9 -0.9 XTP/dITP diphosphatase compare
MMP_RS07820 -0.9 -2.1 UPF0104 family protein compare
MMP_RS06980 -0.9 -3.9 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS03555 -0.9 -3.7 transcriptional regulator compare
MMP_RS01745 -0.9 -3.5 AMP phosphorylase compare
MMP_RS05865 -0.9 -1.0 hypothetical protein compare
MMP_RS08075 -0.9 -2.9 DUF749 domain-containing protein compare
MMP_RS07420 -0.9 -2.5 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS00620 -0.8 -3.4 4Fe-4S binding protein compare
MMP_RS03035 -0.8 -1.5 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS08070 -0.8 -2.3 DUF2096 domain-containing protein compare
MMP_RS07730 -0.8 -0.9 pyruvate synthase subunit beta compare
MMP_RS02310 -0.8 -1.3 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS04035 -0.8 -1.6 hypothetical protein compare
MMP_RS00730 -0.8 -1.8 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS05930 -0.8 -1.6 3-isopropylmalate dehydratase large subunit compare
MMP_RS03020 -0.8 -2.4 peptidylprolyl isomerase compare
MMP_RS06110 -0.8 -1.9 ATP-dependent protease LonB compare
MMP_RS07775 -0.8 -2.8 alanine dehydrogenase compare
MMP_RS00985 -0.8 -2.3 CDC48 family AAA ATPase compare
MMP_RS06090 -0.8 -3.3 iron ABC transporter permease compare
MMP_RS01265 -0.8 -1.2 hypothetical protein compare
MMP_RS04850 -0.8 -5.8 UPF0254 family protein compare
MMP_RS06725 -0.8 -3.7 hypothetical protein compare
MMP_RS07695 -0.8 -3.4 DUF3236 domain-containing protein compare
MMP_RS01275 -0.8 -4.4 class III signal peptide-containing protein compare
MMP_RS07335 -0.8 -4.0 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMP_RS07700 -0.8 -4.1 DUF1188 domain-containing protein compare
MMP_RS01315 -0.8 -6.8 DUF2341 domain-containing protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress Sodium selenate across organisms