Experiment set14S705 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete no stress control

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS07415 +2.6 14.3 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMP_RS01370 +2.4 13.1 acetate--CoA ligase family protein compare
MMP_RS00750 +1.9 5.0 fumarate hydratase compare
MMP_RS07955 +1.7 10.6 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS02885 +1.7 14.5 molybdopterin biosynthesis protein compare
MMP_RS07705 +1.5 8.9 transcriptional regulator compare
MMP_RS06575 +1.5 5.4 fluoride efflux transporter CrcB compare
MMP_RS03485 +1.4 4.8 TIGR00267 family protein compare
MMP_RS04605 +1.3 5.8 cobalt ECF transporter T component CbiQ compare
MMP_RS06485 +1.1 1.4 zinc ribbon domain-containing protein compare
MMP_RS01075 +1.1 1.1 hypothetical protein compare
MMP_RS08320 +1.0 4.9 molybdopterin molybdotransferase MoeA compare
MMP_RS07435 +1.0 1.9 GMP synthase subunit A compare
MMP_RS08275 +1.0 5.6 hypothetical protein compare
MMP_RS04695 +1.0 5.7 selenide water dikinase SelD compare
MMP_RS07960 +0.9 6.0 sugar phosphate isomerase/epimerase compare
MMP_RS03420 +0.9 3.3 acetolactate synthase small subunit compare
MMP_RS06325 +0.9 1.9 hypothetical protein compare
MMP_RS02880 +0.9 5.0 AmmeMemoRadiSam system radical SAM enzyme compare
MMP_RS00120 +0.9 3.7 LysR family transcriptional regulator compare
MMP_RS00125 +0.9 1.7 DUF2798 domain-containing protein compare
MMP_RS06495 +0.9 3.0 YkgJ family cysteine cluster protein compare
MMP_RS01570 +0.8 1.8 hypothetical protein compare
MMP_RS06570 +0.8 3.0 DUF190 domain-containing protein compare
MMP_RS01775 +0.8 1.7 TIGR00297 family protein compare
MMP_RS03215 +0.8 4.4 MBL fold metallo-hydrolase compare
MMP_RS02310 +0.8 1.8 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS00345 +0.7 3.9 DUF2666 domain-containing protein compare
MMP_RS04620 +0.7 4.0 cobalt transporter CbiM compare
MMP_RS00450 +0.7 1.5 4Fe-4S binding protein compare
MMP_RS02870 +0.7 4.5 hypothetical protein compare
MMP_RS07850 +0.7 2.8 prephenate dehydratase compare
MMP_RS05965 +0.7 2.4 carboxymuconolactone decarboxylase family protein compare
MMP_RS07815 +0.7 1.2 DUF2120 domain-containing protein compare
MMP_RS04055 +0.7 1.4 hypothetical protein compare
MMP_RS00655 +0.7 1.9 hypothetical protein compare
MMP_RS06860 +0.6 1.6 4Fe-4S binding protein compare
MMP_RS07095 +0.6 2.6 PspC domain-containing protein compare
MMP_RS07355 +0.6 0.7 transcription factor S compare
MMP_RS05975 +0.6 3.7 hypothetical protein compare
MMP_RS02290 +0.6 4.1 MBL fold metallo-hydrolase compare
MMP_RS03440 +0.6 0.9 MoaD/ThiS family protein compare
MMP_RS03675 +0.6 4.3 RimK family alpha-L-glutamate ligase compare
MMP_RS05850 +0.6 1.9 Ldh family oxidoreductase compare
MMP_RS03495 +0.6 3.0 Na/Pi cotransporter family protein compare
MMP_RS05955 +0.6 1.4 CoB--CoM heterodisulfide reductase subunit C compare
MMP_RS07125 +0.6 2.9 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS05315 +0.6 1.4 hypothetical protein compare
MMP_RS01470 +0.6 0.8 ATP-binding cassette domain-containing protein compare
MMP_RS08335 +0.6 2.5 NADH-quinone oxidoreductase subunit B family protein compare
MMP_RS06590 +0.6 1.5 GNAT family N-acetyltransferase compare
MMP_RS01540 +0.6 1.8 DUF504 domain-containing protein compare
MMP_RS01960 +0.6 0.6 hypothetical protein compare
MMP_RS00760 +0.6 2.9 branched-chain-amino-acid transaminase compare
MMP_RS08660 +0.6 3.1 DHH family phosphoesterase compare
MMP_RS01605 +0.5 2.5 hypothetical protein compare
MMP_RS06870 +0.5 2.6 DedA family protein compare
MMP_RS05695 +0.5 2.8 phospholipase D-like domain-containing protein compare
MMP_RS06705 +0.5 2.0 formate/nitrite transporter family protein compare
MMP_RS08355 +0.5 1.9 Na(+)/H(+) antiporter subunit B compare
MMP_RS08410 +0.5 1.9 DUF169 domain-containing protein compare
MMP_RS03465 +0.5 0.9 adenine phosphoribosyltransferase compare
MMP_RS05825 +0.5 1.8 peptidyl-prolyl cis-trans isomerase compare
MMP_RS03320 +0.5 1.7 metal-dependent transcriptional regulator compare
MMP_RS08340 +0.5 2.5 4Fe-4S binding protein compare
MMP_RS08215 +0.5 1.0 DUF483 domain-containing protein compare
MMP_RS05950 +0.5 2.9 nickel-dependent hydrogenase large subunit compare
MMP_RS06335 +0.5 1.6 HAD family hydrolase compare
MMP_RS08485 +0.5 2.8 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS08365 +0.5 2.4 energy conserving hydrogenase EhbF compare
MMP_RS07120 +0.5 2.5 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS00530 +0.5 1.9 tRNA pseudouridine(54/55) synthase Pus10 compare
MMP_RS08430 +0.5 2.0 HAD family hydrolase compare
MMP_RS07150 +0.5 2.4 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS07560 +0.5 2.2 prefoldin subunit alpha compare
MMP_RS03790 +0.5 2.9 hypothetical protein compare
MMP_RS07925 +0.4 2.5 haloacid dehalogenase compare
MMP_RS01660 +0.4 1.9 hypothetical protein compare
MMP_RS02890 +0.4 2.6 TIGR00296 family protein compare
MMP_RS08360 +0.4 1.8 hypothetical protein compare
MMP_RS08070 +0.4 1.8 DUF2096 domain-containing protein compare
MMP_RS03785 +0.4 1.0 cupin domain-containing protein compare
MMP_RS00945 +0.4 0.7 PadR family transcriptional regulator compare
MMP_RS00325 +0.4 0.6 RNA-binding protein compare
MMP_RS05640 +0.4 1.8 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS00845 +0.4 2.5 acetate--CoA ligase compare
MMP_RS08345 +0.4 2.5 4Fe-4S binding protein compare
MMP_RS02960 +0.4 2.6 class I SAM-dependent methyltransferase family protein compare
MMP_RS07130 +0.4 2.2 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS08390 +0.4 1.5 DUF5400 domain-containing protein compare
MMP_RS07145 +0.4 2.7 AmmeMemoRadiSam system protein B compare
MMP_RS06165 +0.4 2.6 ABC transporter permease compare
MMP_RS03270 +0.4 1.1 ADP-ribosylglycohydrolase family protein compare
MMP_RS02785 +0.4 2.2 MarR family transcriptional regulator compare
MMP_RS06155 +0.4 0.9 DUF4186 domain-containing protein compare
MMP_RS01210 +0.4 2.4 sodium:solute symporter compare
MMP_RS00705 +0.4 0.9 hypothetical protein compare
MMP_RS05535 +0.4 1.9 hypothetical protein compare
MMP_RS07710 +0.4 1.8 cell division protein FtsZ compare
MMP_RS08705 +0.4 1.3 sulfopyruvate decarboxylase subunit beta compare
MMP_RS02835 +0.4 1.2 CGGC domain-containing protein compare
MMP_RS06655 +0.4 2.5 glycoside hydrolase family 15 protein compare
MMP_RS08250 +0.4 2.0 pyruvate kinase compare
MMP_RS01930 +0.4 2.5 hypothetical protein compare
MMP_RS03150 +0.4 2.1 phosphoglycerate mutase compare
MMP_RS03910 +0.4 0.6 hypothetical protein compare
MMP_RS06770 +0.4 2.3 DHH family phosphoesterase compare
MMP_RS01525 +0.4 0.8 nucleoside-diphosphate kinase compare
MMP_RS06480 +0.4 1.9 ABC transporter substrate-binding protein compare
MMP_RS08850 +0.4 2.9 hypothetical protein compare
MMP_RS03325 +0.4 2.0 hypothetical protein compare
MMP_RS07650 +0.4 2.4 TldD/PmbA family protein compare
MMP_RS08455 +0.4 1.9 multiprotein bridging factor aMBF1 compare
MMP_RS07890 +0.4 1.1 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS05110 +0.4 1.6 16S ribosomal RNA methyltransferase A compare
MMP_RS07860 +0.3 0.3 hypothetical protein compare
MMP_RS06910 +0.3 2.2 RlmF-related methyltransferase compare
MMP_RS06545 +0.3 1.8 ferredoxin family protein compare
MMP_RS05940 +0.3 1.9 corrinoid protein compare
MMP_RS03340 +0.3 0.4 ABC transporter ATP-binding protein compare
MMP_RS08075 +0.3 2.0 DUF749 domain-containing protein compare
MMP_RS04105 +0.3 2.1 MarR family transcriptional regulator compare
MMP_RS07835 +0.3 1.7 TldD/PmbA family protein compare
MMP_RS01465 +0.3 0.6 hypothetical protein compare
MMP_RS07680 +0.3 1.3 DUF366 family protein compare
MMP_RS02610 +0.3 1.4 DUF2162 domain-containing protein compare
MMP_RS07335 +0.3 1.2 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMP_RS05310 +0.3 2.2 hypothetical protein compare
MMP_RS07715 +0.3 1.7 YfcE family phosphodiesterase compare
MMP_RS00665 +0.3 1.4 hypothetical protein compare
MMP_RS04035 +0.3 0.7 hypothetical protein compare
MMP_RS05720 +0.3 0.7 signal recognition particle subunit SRP19/SEC65 family protein compare
MMP_RS03585 +0.3 1.2 Hsp20/alpha crystallin family protein compare
MMP_RS08750 +0.3 0.7 hypothetical protein compare
MMP_RS02480 +0.3 0.7 hypothetical protein compare
MMP_RS08380 +0.3 0.9 phosphatase PAP2 family protein compare
MMP_RS05460 +0.3 2.2 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS05645 +0.3 2.1 AEC family transporter compare
MMP_RS05665 +0.3 1.6 phosphate ABC transporter permease subunit PstC compare
MMP_RS02550 +0.3 1.3 helix-turn-helix transcriptional regulator compare
MMP_RS04615 +0.3 0.9 PDGLE domain-containing protein compare
MMP_RS07410 +0.3 1.5 4-demethylwyosine synthase TYW1 compare
MMP_RS06225 +0.3 1.2 DNA double-strand break repair nuclease NurA compare
MMP_RS09060 +0.3 2.1 hypothetical protein compare
MMP_RS08315 +0.3 1.2 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS02810 +0.3 1.5 hypothetical protein compare
MMP_RS00660 +0.3 1.7 alkaline phosphatase family protein compare
MMP_RS02410 +0.3 0.9 ABC transporter substrate-binding protein compare
MMP_RS05360 +0.3 1.5 hypothetical protein compare
MMP_RS00155 +0.3 1.1 heavy metal-binding domain-containing protein compare
MMP_RS03395 +0.3 1.5 hypothetical protein compare
MMP_RS06060 +0.3 2.0 hypothetical protein compare
MMP_RS05675 +0.3 0.9 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS02525 +0.3 2.1 DUF2254 domain-containing protein compare
MMP_RS03685 +0.3 1.9 Mrp/NBP35 family ATP-binding protein compare
MMP_RS02780 +0.3 2.1 hypothetical protein compare
MMP_RS07100 +0.3 2.0 hypothetical protein compare
MMP_RS01155 +0.3 1.2 XRE family transcriptional regulator compare
MMP_RS08665 +0.3 2.2 hypothetical protein compare
MMP_RS04735 +0.3 1.5 tautomerase family protein compare
MMP_RS00975 +0.3 1.6 HD domain-containing protein compare
MMP_RS03615 +0.3 1.7 4Fe-4S binding protein compare
MMP_RS02375 +0.3 1.5 hypothetical protein compare
MMP_RS03300 +0.3 0.3 TOBE domain-containing protein compare
MMP_RS09030 +0.3 1.1 hypothetical protein compare
MMP_RS00380 +0.3 1.0 P-II family nitrogen regulator compare
MMP_RS02465 +0.3 1.5 hypothetical protein compare
MMP_RS06440 +0.3 1.2 CBS domain-containing protein compare
MMP_RS02640 +0.3 2.1 DUF6198 family protein compare
MMP_RS01320 +0.3 0.9 hypothetical protein compare
MMP_RS05960 +0.3 1.7 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS03330 +0.3 1.6 rubrerythrin family protein compare
MMP_RS02685 +0.3 1.1 molybdate ABC transporter substrate-binding protein compare
MMP_RS08385 +0.3 1.3 ABC transporter substrate-binding protein compare
MMP_RS06745 +0.3 0.9 DUF2119 domain-containing protein compare
MMP_RS00625 +0.3 1.2 hypothetical protein compare
MMP_RS05895 +0.2 1.5 metallophosphoesterase compare
MMP_RS02500 +0.2 1.1 minichromosome maintenance protein MCM compare
MMP_RS08775 +0.2 1.0 methanogenesis marker 9 domain-containing protein compare
MMP_RS02320 +0.2 1.5 glutamate-cysteine ligase family protein compare
MMP_RS04260 +0.2 1.0 coenzyme F420 hydrogenase subunit gamma compare
MMP_RS00825 +0.2 1.2 fumarylacetoacetate hydrolase family protein compare
MMP_RS06990 +0.2 0.8 CatB-related O-acetyltransferase compare
MMP_RS01160 +0.2 1.3 DMT family transporter compare
MMP_RS06280 +0.2 1.4 alpha-glucan family phosphorylase compare
MMP_RS06375 +0.2 1.1 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS07840 +0.2 0.7 ribonuclease III compare
MMP_RS07140 +0.2 1.8 TIGR00341 family protein compare
MMP_RS03250 +0.2 0.8 MJ1244 family protein compare
MMP_RS01055 +0.2 0.9 hypothetical protein compare
MMP_RS00545 +0.2 1.0 XRE family transcriptional regulator compare
MMP_RS09065 +0.2 1.7 hypothetical protein compare
MMP_RS00280 +0.2 1.3 DUF2118 domain-containing protein compare
MMP_RS02655 +0.2 1.7 terpene cyclase/mutase family protein compare
MMP_RS05275 +0.2 1.4 AI-2E family transporter compare
MMP_RS09025 +0.2 0.3 hypothetical protein compare
MMP_RS02790 +0.2 0.3 class III signal peptide-containing protein compare
MMP_RS07675 +0.2 1.9 S-layer protein compare
MMP_RS01130 +0.2 1.4 flavoprotein compare
MMP_RS01190 +0.2 1.1 cadmium-translocating P-type ATPase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in no stress control experiments