Experiment set14S690 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete Magnesium chloride hexahydrate 250 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS03960 -5.6 -0.8 hypothetical protein compare
MMP_RS02280 -5.5 -0.8 DUF211 domain-containing protein compare
MMP_RS06625 -5.2 -2.0 DNA primase compare
MMP_RS01500 -5.1 -2.1 CBS domain-containing protein compare
MMP_RS08650 -4.9 -3.4 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS06230 -4.8 -2.5 helix-turn-helix domain-containing protein compare
MMP_RS05265 -4.8 -2.3 2-isopropylmalate synthase compare
MMP_RS01325 -4.7 -2.2 dihydroneopterin aldolase family protein compare
MMP_RS00515 -4.5 -0.9 DUF655 domain-containing protein compare
MMP_RS03475 -4.5 -0.6 hypothetical protein compare
MMP_RS01795 -4.4 -1.5 methanogenesis marker 6 protein compare
MMP_RS05920 -4.3 -0.6 50S ribosomal protein L37e compare
MMP_RS08460 -4.3 -2.8 proteasome-activating nucleotidase compare
MMP_RS07635 -4.1 -7.2 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS08635 -4.0 -2.0 UbiA family prenyltransferase compare
MMP_RS06295 -3.9 -6.5 methanogenesis marker 14 protein compare
MMP_RS04890 -3.9 -0.8 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS03445 -3.8 -1.0 methanogenesis marker 17 protein compare
MMP_RS06120 -3.7 -2.0 UPF0147 family protein compare
MMP_RS04780 -3.7 -3.2 ribonuclease P compare
MMP_RS01020 -3.6 -0.9 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS03205 -3.6 -1.4 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS08720 -3.5 -1.4 4Fe-4S binding protein compare
MMP_RS07600 -3.5 -2.3 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS06630 -3.4 -0.7 UPF0058 family protein compare
MMP_RS01755 -3.4 -1.0 DUF2097 domain-containing protein compare
MMP_RS01610 -3.4 -2.9 hypothetical protein compare
MMP_RS06975 -3.3 -2.3 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS09020 -3.2 -1.5 hypothetical protein compare
MMP_RS00685 -3.2 -3.4 2-phospho-L-lactate guanylyltransferase compare
MMP_RS02875 -3.2 -11.0 chorismate pyruvate-lyase family protein compare
MMP_RS03640 -3.0 -3.6 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS08790 -3.0 -1.9 translation initiation factor IF-2 subunit alpha compare
MMP_RS00900 -3.0 -1.9 50S ribosomal protein L39e compare
MMP_RS03435 -2.9 -2.0 ketol-acid reductoisomerase compare
MMP_RS08820 -2.9 -4.7 hypothetical protein compare
MMP_RS01225 -2.9 -5.1 DUF5379 domain-containing protein compare
MMP_RS01960 -2.9 -0.8 hypothetical protein compare
MMP_RS08645 -2.8 -6.8 UPF0179 family protein compare
MMP_RS04585 -2.8 -8.1 AIR synthase related protein compare
MMP_RS07445 -2.8 -7.3 helix-turn-helix domain-containing protein compare
MMP_RS01005 -2.7 -1.2 riboflavin synthase compare
MMP_RS06475 -2.6 -4.5 FAD-dependent oxidoreductase compare
MMP_RS03025 -2.6 -5.4 molybdenum cofactor guanylyltransferase compare
MMP_RS06285 -2.5 -1.8 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS07425 -2.5 -5.2 GTP-binding protein compare
MMP_RS00695 -2.5 -0.7 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS07390 -2.4 -2.3 cell division protein FtsZ compare
MMP_RS01175 -2.4 -2.2 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS02240 -2.4 -2.5 methanogenesis marker 7 protein compare
MMP_RS06020 -2.4 -3.8 archaeoflavoprotein AfpA compare
MMP_RS07525 -2.4 -6.6 4Fe-4S binding protein compare
MMP_RS07735 -2.4 -0.7 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS03555 -2.4 -7.8 transcriptional regulator compare
MMP_RS05815 -2.4 -2.2 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS00895 -2.4 -3.3 hypothetical protein compare
MMP_RS07755 -2.3 -1.0 DUF555 domain-containing protein compare
MMP_RS00115 -2.3 -11.1 radical SAM protein compare
MMP_RS06400 -2.2 -1.3 4Fe-4S binding protein compare
MMP_RS06895 -2.2 -1.3 selenocysteine-specific translation elongation factor compare
MMP_RS06725 -2.2 -7.7 hypothetical protein compare
MMP_RS05430 -2.2 -3.5 TIGR00288 family NYN domain-containing protein compare
MMP_RS07620 -2.2 -4.3 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS06270 -2.2 -4.1 TIGR00300 family protein compare
MMP_RS05250 -2.2 -2.8 NFYB/HAP3 family transcription factor subunit compare
MMP_RS01800 -2.1 -2.5 TIGR00303 family protein compare
MMP_RS06350 -2.1 -4.3 HesA/MoeB/ThiF family protein compare
MMP_RS07750 -2.1 -4.4 DUF357 domain-containing protein compare
MMP_RS06340 -2.1 -7.2 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS00110 -2.1 -2.3 hypothetical protein compare
MMP_RS05515 -2.1 -5.9 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS05845 -2.1 -1.5 tRNA-intron lyase compare
MMP_RS08785 -2.0 -0.9 RNA-protein complex protein Nop10 compare
MMP_RS05245 -2.0 -7.9 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS00735 -1.9 -3.0 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS07200 -1.9 -4.8 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS00315 -1.9 -4.7 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS03035 -1.9 -2.6 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS04685 -1.9 -1.8 DUF126 domain-containing protein compare
MMP_RS06355 -1.9 -1.8 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS02165 -1.9 -6.3 tRNA-dihydrouridine synthase compare
MMP_RS07385 -1.9 -1.9 protein translocase SEC61 complex subunit gamma compare
MMP_RS07900 -1.9 -2.0 YeeE/YedE family protein compare
MMP_RS08940 -1.9 -1.3 MetS family NSS transporter small subunit compare
MMP_RS02145 -1.8 -5.1 winged helix-turn-helix transcriptional regulator compare
MMP_RS07700 -1.8 -7.4 DUF1188 domain-containing protein compare
MMP_RS04485 -1.8 -8.7 putative beta-lysine N-acetyltransferase compare
MMP_RS06885 -1.8 -2.0 50S ribosome-binding GTPase compare
MMP_RS01985 -1.8 -3.5 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS05545 -1.8 -4.4 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS00730 -1.8 -4.5 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS05865 -1.7 -2.2 hypothetical protein compare
MMP_RS06855 -1.7 -6.2 hypothetical protein compare
MMP_RS07005 -1.7 -0.5 4Fe-4S binding protein compare
MMP_RS07380 -1.7 -1.8 transcription elongation factor Spt5 compare
MMP_RS03600 -1.7 -1.0 triose-phosphate isomerase compare
MMP_RS06940 -1.6 -2.0 polyprenyl diphosphate synthase compare
MMP_RS01380 -1.6 -3.0 PHP domain-containing protein compare
MMP_RS07615 -1.6 -4.9 energy-coupling factor ABC transporter permease compare
MMP_RS02175 -1.6 -0.7 DUF1611 domain-containing protein compare
MMP_RS00320 -1.6 -1.3 class I SAM-dependent methyltransferase compare
MMP_RS06155 -1.6 -2.3 DUF4186 domain-containing protein compare
MMP_RS06200 -1.6 -6.4 M24 family metallopeptidase compare
MMP_RS05540 -1.6 -2.3 hypothetical protein compare
MMP_RS07775 -1.6 -3.9 alanine dehydrogenase compare
MMP_RS06015 -1.6 -5.8 flavodoxin family protein compare
MMP_RS06110 -1.6 -2.2 ATP-dependent protease LonB compare
MMP_RS00130 -1.6 -0.9 nickel-responsive transcriptional regulator NikR compare
MMP_RS01445 -1.5 -4.7 hypothetical protein compare
MMP_RS00725 -1.5 -4.9 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS06730 -1.5 -1.3 phosphopantothenate/pantothenate synthetase compare
MMP_RS04850 -1.5 -10.0 UPF0254 family protein compare
MMP_RS08595 -1.5 -1.0 flagellar protein C compare
MMP_RS05930 -1.5 -2.1 3-isopropylmalate dehydratase large subunit compare
MMP_RS03580 -1.5 -2.0 signal recognition particle-docking protein FtsY compare
MMP_RS02100 -1.5 -1.9 metallophosphoesterase compare
MMP_RS00305 -1.5 -1.2 phosphoribosyl-ATP diphosphatase compare
MMP_RS07765 -1.5 -6.3 sodium:alanine symporter family protein compare
MMP_RS01335 -1.5 -1.3 prefoldin subunit beta compare
MMP_RS02245 -1.5 -1.5 hypothetical protein compare
MMP_RS01830 -1.5 -1.2 tRNA-Val compare
MMP_RS04710 -1.5 -1.1 hypothetical protein compare
MMP_RS05510 -1.5 -4.1 Rrf2 family transcriptional regulator compare
MMP_RS05765 -1.5 -3.6 M42 family metallopeptidase compare
MMP_RS02190 -1.4 -2.6 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS00945 -1.4 -1.0 PadR family transcriptional regulator compare
MMP_RS07875 -1.4 -3.4 hypothetical protein compare
MMP_RS08440 -1.4 -2.2 cell division protein SepF compare
MMP_RS00040 -1.4 -4.4 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS01980 -1.4 -7.6 trimeric intracellular cation channel family protein compare
MMP_RS08715 -1.4 -1.0 formylmethanofuran dehydrogenase subunit B compare
MMP_RS06105 -1.4 -5.3 hydrogenase maturation peptidase HycI compare
MMP_RS01250 -1.4 -3.7 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS01365 -1.4 -1.9 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS03015 -1.4 -5.3 GTP 3' 8-cyclase MoaA compare
MMP_RS07580 -1.4 -2.3 DUF356 domain-containing protein compare
MMP_RS00810 -1.4 -3.9 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS06395 -1.4 -2.8 ThiF family adenylyltransferase compare
MMP_RS07545 -1.4 -0.6 HTH domain-containing protein compare
MMP_RS04775 -1.4 -1.5 adenosylhomocysteinase compare
MMP_RS03385 -1.3 -0.8 cation diffusion facilitator family transporter compare
MMP_RS00620 -1.3 -5.4 4Fe-4S binding protein compare
MMP_RS07365 -1.3 -6.3 2-phosphoglycerate kinase compare
MMP_RS07695 -1.3 -4.2 DUF3236 domain-containing protein compare
MMP_RS02355 -1.3 -1.5 30S ribosomal protein S27ae compare
MMP_RS03110 -1.3 -2.8 glycosyltransferase family 2 protein compare
MMP_RS02170 -1.3 -3.2 CBS domain-containing protein compare
MMP_RS03440 -1.3 -0.9 MoaD/ThiS family protein compare
MMP_RS00850 -1.3 -3.1 TIGR01177 family methyltransferase compare
MMP_RS07685 -1.3 -4.4 TIGR01212 family radical SAM protein compare
MMP_RS07625 -1.2 -2.3 cobalt ECF transporter T component CbiQ compare
MMP_RS02345 -1.2 -1.7 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS05355 -1.2 -0.7 hypothetical protein compare
MMP_RS07605 -1.2 -1.9 diadenylate cyclase compare
MMP_RS06345 -1.2 -4.5 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS01965 -1.2 -2.6 DUF1616 domain-containing protein compare
MMP_RS08200 -1.2 -7.7 archaeosine synthase subunit alpha compare
MMP_RS01840 -1.1 -4.0 TIGR00289 family protein compare
MMP_RS06930 -1.1 -5.6 MBL fold metallo-hydrolase compare
MMP_RS06175 -1.1 -3.7 winged helix-turn-helix transcriptional regulator compare
MMP_RS06215 -1.1 -2.1 30S ribosomal protein S6e compare
MMP_RS06680 -1.1 -5.5 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS07535 -1.1 -4.7 4Fe-4S binding protein compare
MMP_RS04500 -1.1 -6.7 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS00430 -1.1 -1.8 hypothetical protein compare
MMP_RS07630 -1.1 -0.9 ATP-binding cassette domain-containing protein compare
MMP_RS00050 -1.1 -2.9 AarF/UbiB family protein compare
MMP_RS02110 -1.1 -1.5 hypothetical protein compare
MMP_RS06035 -1.0 -3.9 glycosyltransferase family 2 protein compare
MMP_RS06315 -1.0 -0.5 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS00855 -1.0 -3.7 DUF367 family protein compare
MMP_RS00300 -1.0 -0.3 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS05125 -1.0 -4.8 D-aminoacyl-tRNA deacylase compare
MMP_RS01265 -1.0 -1.2 hypothetical protein compare
MMP_RS08995 -1.0 -0.9 hypothetical protein compare
MMP_RS08745 -1.0 -3.1 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS07845 -1.0 -0.9 LL-diaminopimelate aminotransferase compare
MMP_RS02930 -1.0 -2.4 class I SAM-dependent methyltransferase compare
MMP_RS03315 -1.0 -0.7 ferrous iron transport protein A compare
MMP_RS01665 -1.0 -1.8 DUF2111 domain-containing protein compare
MMP_RS07185 -1.0 -3.7 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS04720 -1.0 -1.8 DedA family protein compare
MMP_RS00290 -1.0 -2.8 hypothetical protein compare
MMP_RS07575 -1.0 -1.7 RNA ligase partner protein compare
MMP_RS02935 -1.0 -2.6 A24 family peptidase compare
MMP_RS05550 -1.0 -0.4 cation:proton antiporter compare
MMP_RS05875 -1.0 -2.0 hydroxyethylthiazole kinase compare
MMP_RS01545 -1.0 -0.6 CBS domain-containing protein compare
MMP_RS08095 -1.0 -3.5 dethiobiotin synthase compare
MMP_RS02195 -0.9 -1.5 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS03095 -0.9 -2.7 diphthine synthase compare
MMP_RS01780 -0.9 -3.3 TrmJ/YjtD family RNA methyltransferase compare
MMP_RS08675 -0.9 -1.7 class III signal peptide-containing protein compare
MMP_RS07195 -0.9 -3.6 M20 family metallo-hydrolase compare
MMP_RS04480 -0.9 -5.3 lysine 2 3-aminomutase compare
MMP_RS00555 -0.9 -2.7 MFS transporter compare
MMP_RS05580 -0.9 -5.2 glycosyltransferase compare
MMP_RS08590 -0.9 -2.9 flagellin compare
MMP_RS02025 -0.9 -3.5 DNA-directed DNA polymerase compare
MMP_RS05440 -0.9 -3.3 winged helix-turn-helix transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress Magnesium chloride hexahydrate across organisms