Experiment set14S677 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete sodium nitrite 0.125 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS01500 -8.0 -2.8 CBS domain-containing protein compare
MMP_RS06895 -6.6 -2.3 selenocysteine-specific translation elongation factor compare
MMP_RS03445 -6.2 -1.2 methanogenesis marker 17 protein compare
MMP_RS08720 -5.2 -2.0 4Fe-4S binding protein compare
MMP_RS02900 -5.0 -1.0 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS07380 -5.0 -3.5 transcription elongation factor Spt5 compare
MMP_RS01610 -4.5 -3.4 hypothetical protein compare
MMP_RS00305 -4.4 -2.7 phosphoribosyl-ATP diphosphatase compare
MMP_RS06975 -4.0 -2.9 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS01325 -4.0 -2.8 dihydroneopterin aldolase family protein compare
MMP_RS01175 -3.8 -3.4 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS01005 -3.6 -1.8 riboflavin synthase compare
MMP_RS06355 -3.6 -2.9 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS03315 -3.6 -2.0 ferrous iron transport protein A compare
MMP_RS06625 -3.3 -2.5 DNA primase compare
MMP_RS07635 -3.3 -7.0 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS02280 -3.1 -1.2 DUF211 domain-containing protein compare
MMP_RS06230 -3.1 -3.9 helix-turn-helix domain-containing protein compare
MMP_RS09020 -3.1 -1.8 hypothetical protein compare
MMP_RS03960 -3.1 -1.2 hypothetical protein compare
MMP_RS05920 -3.0 -0.8 50S ribosomal protein L37e compare
MMP_RS01800 -3.0 -3.5 TIGR00303 family protein compare
MMP_RS04585 -2.9 -10.5 AIR synthase related protein compare
MMP_RS02165 -2.9 -10.2 tRNA-dihydrouridine synthase compare
MMP_RS04775 -2.9 -3.2 adenosylhomocysteinase compare
MMP_RS08460 -2.9 -2.4 proteasome-activating nucleotidase compare
MMP_RS07620 -2.8 -4.2 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS07445 -2.7 -6.2 helix-turn-helix domain-containing protein compare
MMP_RS06295 -2.7 -4.9 methanogenesis marker 14 protein compare
MMP_RS06475 -2.7 -5.6 FAD-dependent oxidoreductase compare
MMP_RS08820 -2.7 -4.9 hypothetical protein compare
MMP_RS00110 -2.6 -3.7 hypothetical protein compare
MMP_RS06345 -2.6 -9.2 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS06730 -2.6 -2.5 phosphopantothenate/pantothenate synthetase compare
MMP_RS08210 -2.6 -2.3 phosphatidylglycerophosphatase A compare
MMP_RS04685 -2.5 -2.4 DUF126 domain-containing protein compare
MMP_RS01795 -2.5 -1.3 methanogenesis marker 6 protein compare
MMP_RS02195 -2.5 -4.6 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS03035 -2.4 -3.1 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS08645 -2.4 -9.0 UPF0179 family protein compare
MMP_RS03475 -2.4 -0.8 hypothetical protein compare
MMP_RS06020 -2.3 -4.0 archaeoflavoprotein AfpA compare
MMP_RS00300 -2.3 -0.8 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS06680 -2.3 -10.3 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS07625 -2.3 -3.9 cobalt ECF transporter T component CbiQ compare
MMP_RS08635 -2.3 -2.5 UbiA family prenyltransferase compare
MMP_RS05430 -2.3 -3.1 TIGR00288 family NYN domain-containing protein compare
MMP_RS07630 -2.3 -1.2 ATP-binding cassette domain-containing protein compare
MMP_RS07545 -2.3 -1.1 HTH domain-containing protein compare
MMP_RS08715 -2.2 -1.9 formylmethanofuran dehydrogenase subunit B compare
MMP_RS06110 -2.2 -3.7 ATP-dependent protease LonB compare
MMP_RS02240 -2.2 -3.2 methanogenesis marker 7 protein compare
MMP_RS00115 -2.2 -10.4 radical SAM protein compare
MMP_RS05925 -2.2 -3.8 small nuclear ribonucleoprotein compare
MMP_RS01020 -2.2 -1.2 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS06120 -2.2 -2.3 UPF0147 family protein compare
MMP_RS06725 -2.2 -9.1 hypothetical protein compare
MMP_RS02875 -2.2 -7.1 chorismate pyruvate-lyase family protein compare
MMP_RS06685 -2.2 -7.2 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS03580 -2.1 -2.8 signal recognition particle-docking protein FtsY compare
MMP_RS03640 -2.1 -2.8 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS08435 -2.1 -2.1 Era-like GTP-binding protein compare
MMP_RS08790 -2.1 -2.4 translation initiation factor IF-2 subunit alpha compare
MMP_RS07615 -2.0 -6.2 energy-coupling factor ABC transporter permease compare
MMP_RS08745 -2.0 -4.4 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS01225 -2.0 -4.6 DUF5379 domain-containing protein compare
MMP_RS02345 -2.0 -3.0 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS07005 -1.9 -0.8 4Fe-4S binding protein compare
MMP_RS06270 -1.9 -4.8 TIGR00300 family protein compare
MMP_RS02235 -1.8 -7.3 CBS domain-containing protein compare
MMP_RS04780 -1.8 -2.1 ribonuclease P compare
MMP_RS00895 -1.8 -2.6 hypothetical protein compare
MMP_RS07200 -1.8 -5.3 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS03095 -1.8 -5.3 diphthine synthase compare
MMP_RS05250 -1.8 -3.3 NFYB/HAP3 family transcription factor subunit compare
MMP_RS05540 -1.8 -2.0 hypothetical protein compare
MMP_RS03305 -1.7 -8.2 winged helix-turn-helix domain-containing protein compare
MMP_RS06200 -1.7 -7.4 M24 family metallopeptidase compare
MMP_RS01985 -1.7 -4.0 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS04890 -1.7 -1.0 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS06855 -1.7 -6.7 hypothetical protein compare
MMP_RS00695 -1.7 -0.9 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS01980 -1.7 -11.8 trimeric intracellular cation channel family protein compare
MMP_RS05515 -1.7 -6.4 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS06175 -1.6 -5.4 winged helix-turn-helix transcriptional regulator compare
MMP_RS03600 -1.6 -2.2 triose-phosphate isomerase compare
MMP_RS00985 -1.6 -4.0 CDC48 family AAA ATPase compare
MMP_RS07425 -1.6 -5.1 GTP-binding protein compare
MMP_RS05635 -1.6 -7.4 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS06285 -1.6 -1.6 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS03025 -1.5 -3.6 molybdenum cofactor guanylyltransferase compare
MMP_RS06630 -1.5 -0.8 UPF0058 family protein compare
MMP_RS03015 -1.5 -5.5 GTP 3' 8-cyclase MoaA compare
MMP_RS06400 -1.5 -1.1 4Fe-4S binding protein compare
MMP_RS06340 -1.5 -5.7 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS01665 -1.5 -1.6 DUF2111 domain-containing protein compare
MMP_RS00130 -1.4 -1.3 nickel-responsive transcriptional regulator NikR compare
MMP_RS08675 -1.4 -3.0 class III signal peptide-containing protein compare
MMP_RS05020 -1.4 -3.3 hypothetical protein compare
MMP_RS08600 -1.4 -2.4 flagellar protein D compare
MMP_RS08595 -1.4 -1.3 flagellar protein C compare
MMP_RS08940 -1.4 -1.6 MetS family NSS transporter small subunit compare
MMP_RS06015 -1.4 -5.1 flavodoxin family protein compare
MMP_RS05580 -1.4 -9.6 glycosyltransferase compare
MMP_RS01840 -1.4 -5.6 TIGR00289 family protein compare
MMP_RS06600 -1.4 -1.2 class III signal peptide-containing protein compare
MMP_RS01755 -1.4 -0.9 DUF2097 domain-containing protein compare
MMP_RS00685 -1.4 -1.8 2-phospho-L-lactate guanylyltransferase compare
MMP_RS02170 -1.4 -3.7 CBS domain-containing protein compare
MMP_RS05245 -1.4 -6.3 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS05865 -1.3 -3.9 hypothetical protein compare
MMP_RS05550 -1.3 -0.7 cation:proton antiporter compare
MMP_RS00320 -1.3 -1.7 class I SAM-dependent methyltransferase compare
MMP_RS07600 -1.3 -2.2 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS06035 -1.3 -5.4 glycosyltransferase family 2 protein compare
MMP_RS07765 -1.3 -6.1 sodium:alanine symporter family protein compare
MMP_RS08200 -1.2 -9.5 archaeosine synthase subunit alpha compare
MMP_RS07330 -1.2 -9.0 membrane protein compare
MMP_RS07605 -1.2 -1.4 diadenylate cyclase compare
MMP_RS05510 -1.2 -4.6 Rrf2 family transcriptional regulator compare
MMP_RS01045 -1.2 -5.3 diphthamide biosynthesis enzyme Dph2 compare
MMP_RS01365 -1.2 -2.2 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS07775 -1.2 -3.9 alanine dehydrogenase compare
MMP_RS01380 -1.2 -3.2 PHP domain-containing protein compare
MMP_RS05845 -1.2 -1.6 tRNA-intron lyase compare
MMP_RS06350 -1.2 -3.7 HesA/MoeB/ThiF family protein compare
MMP_RS00310 -1.1 -6.0 CBS domain-containing protein compare
MMP_RS07525 -1.1 -5.1 4Fe-4S binding protein compare
MMP_RS03555 -1.1 -6.5 transcriptional regulator compare
MMP_RS07820 -1.1 -3.4 UPF0104 family protein compare
MMP_RS03400 -1.1 -1.5 archease compare
MMP_RS03435 -1.1 -0.7 ketol-acid reductoisomerase compare
MMP_RS08855 -1.1 -5.2 hypothetical protein compare
MMP_RS07580 -1.1 -1.4 DUF356 domain-containing protein compare
MMP_RS02190 -1.1 -1.7 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS05765 -1.1 -4.2 M42 family metallopeptidase compare
MMP_RS08165 -1.1 -1.0 phosphoglycerate dehydrogenase compare
MMP_RS04710 -1.1 -1.3 hypothetical protein compare
MMP_RS04870 -1.0 -2.7 TIGR02253 family HAD-type hydrolase compare
MMP_RS08840 -1.0 -5.8 class I SAM-dependent methyltransferase compare
MMP_RS04990 -1.0 -4.0 aquaporin family protein compare
MMP_RS02340 -1.0 -1.8 DNA-directed RNA polymerase subunit E'' compare
MMP_RS00915 -1.0 -3.2 DUF116 domain-containing protein compare
MMP_RS07845 -1.0 -1.4 LL-diaminopimelate aminotransferase compare
MMP_RS06865 -1.0 -1.5 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS04090 -1.0 -1.7 hypothetical protein compare
MMP_RS02355 -1.0 -1.6 30S ribosomal protein S27ae compare
MMP_RS05265 -1.0 -1.3 2-isopropylmalate synthase compare
MMP_RS03700 -1.0 -2.9 sodium:proton antiporter compare
MMP_RS06980 -0.9 -3.1 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS07385 -0.9 -1.5 protein translocase SEC61 complex subunit gamma compare
MMP_RS06215 -0.9 -1.8 30S ribosomal protein S6e compare
MMP_RS08605 -0.9 -3.6 flagellar protein E compare
MMP_RS02025 -0.9 -5.9 DNA-directed DNA polymerase compare
MMP_RS08650 -0.9 -1.5 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS00315 -0.9 -3.4 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS07355 -0.9 -0.7 transcription factor S compare
MMP_RS07735 -0.9 -0.6 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS01280 -0.8 -6.5 DUF515 domain-containing protein compare
MMP_RS05800 -0.8 -3.9 B12-binding domain-containing radical SAM protein compare
MMP_RS07755 -0.8 -0.7 DUF555 domain-containing protein compare
MMP_RS01700 -0.8 -0.8 dihydroxy-acid dehydratase compare
MMP_RS00185 -0.8 -5.3 potassium channel protein compare
MMP_RS06930 -0.8 -4.4 MBL fold metallo-hydrolase compare
MMP_RS01655 -0.8 -2.9 DsrE family protein compare
MMP_RS03440 -0.8 -0.9 MoaD/ThiS family protein compare
MMP_RS03205 -0.8 -1.1 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS00520 -0.8 -1.0 RNA polymerase Rpb4 family protein compare
MMP_RS08590 -0.8 -2.9 flagellin compare
MMP_RS00810 -0.8 -3.4 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS01495 -0.8 -3.9 TraB/GumN family protein compare
MMP_RS06710 -0.8 -2.8 selenium-binding protein compare
MMP_RS05545 -0.8 -2.7 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS00515 -0.8 -0.7 DUF655 domain-containing protein compare
MMP_RS01220 -0.8 -2.9 hypothetical protein compare
MMP_RS08860 -0.8 -3.5 MinD/ParA family protein compare
MMP_RS06915 -0.8 -3.0 metallophosphoesterase compare
MMP_RS03470 -0.8 -4.2 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS07750 -0.8 -3.0 DUF357 domain-containing protein compare
MMP_RS00245 -0.8 -6.1 type II secretion system F family protein compare
MMP_RS00050 -0.8 -3.0 AarF/UbiB family protein compare
MMP_RS01075 -0.8 -1.3 hypothetical protein compare
MMP_RS07365 -0.8 -4.2 2-phosphoglycerate kinase compare
MMP_RS04015 -0.8 -1.3 hypothetical protein compare
MMP_RS00250 -0.8 -5.4 Flp pilus assembly complex ATPase component TadA compare
MMP_RS01195 -0.8 -0.9 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS03560 -0.8 -5.8 Na+/H+ antiporter NhaC family protein compare
MMP_RS07875 -0.8 -2.2 hypothetical protein compare
MMP_RS07115 -0.7 -3.7 MBL fold metallo-hydrolase compare
MMP_RS05295 -0.7 -4.4 minichromosome maintenance protein MCM compare
MMP_RS06885 -0.7 -1.5 50S ribosome-binding GTPase compare
MMP_RS04980 -0.7 -5.0 DUF2193 domain-containing protein compare
MMP_RS01265 -0.7 -2.2 hypothetical protein compare
MMP_RS01250 -0.7 -2.3 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS03250 -0.7 -1.3 MJ1244 family protein compare
MMP_RS00720 -0.7 -3.5 metal-dependent hydrolase compare
MMP_RS01790 -0.7 -2.1 restriction endonuclease compare
MMP_RS00240 -0.7 -5.5 type II secretion system F family protein compare
MMP_RS08290 -0.7 -2.8 DNA-binding protein Alba compare
MMP_RS03020 -0.7 -2.2 peptidylprolyl isomerase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress Sodium nitrite across organisms