Experiment set14S677 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete sodium nitrite 0.125 mM

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS07955 +1.8 8.4 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS07415 +1.8 9.6 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMP_RS01370 +1.7 10.0 acetate--CoA ligase family protein compare
MMP_RS01890 +1.7 8.3 nucleotide sugar dehydrogenase compare
MMP_RS03420 +1.6 9.4 acetolactate synthase small subunit compare
MMP_RS00750 +1.6 4.5 fumarate hydratase compare
MMP_RS01875 +1.5 10.0 N-acetyltransferase compare
MMP_RS01880 +1.4 5.6 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS00450 +1.3 1.7 4Fe-4S binding protein compare
MMP_RS02010 +1.3 5.3 PHP domain-containing protein compare
MMP_RS01885 +1.2 6.4 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS01955 +1.2 2.6 hypothetical protein compare
MMP_RS01925 +1.2 5.8 DUF1616 domain-containing protein compare
MMP_RS01910 +1.2 5.5 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS01900 +1.2 7.7 hypothetical protein compare
MMP_RS06705 +1.1 4.2 formate/nitrite transporter family protein compare
MMP_RS01650 +1.1 1.9 sulfurtransferase TusA family protein compare
MMP_RS07850 +1.1 2.9 prephenate dehydratase compare
MMP_RS01905 +1.1 6.8 glycosyltransferase compare
MMP_RS08315 +1.1 3.5 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS02885 +1.0 8.6 molybdopterin biosynthesis protein compare
MMP_RS06575 +1.0 3.3 fluoride efflux transporter CrcB compare
MMP_RS01915 +1.0 7.4 DUF354 domain-containing protein compare
MMP_RS07645 +1.0 4.2 aldehyde dehydrogenase family protein compare
MMP_RS01970 +1.0 6.8 TIGR04279 domain-containing protein compare
MMP_RS05955 +0.9 2.1 CoB--CoM heterodisulfide reductase subunit C compare
MMP_RS07195 +0.9 6.9 M20 family metallo-hydrolase compare
MMP_RS05535 +0.9 2.7 hypothetical protein compare
MMP_RS03520 +0.9 2.0 YwbE family protein compare
MMP_RS08320 +0.9 3.9 molybdopterin molybdotransferase MoeA compare
MMP_RS04695 +0.8 4.3 selenide water dikinase SelD compare
MMP_RS06570 +0.8 3.8 DUF190 domain-containing protein compare
MMP_RS00345 +0.8 4.2 DUF2666 domain-containing protein compare
MMP_RS01920 +0.8 6.0 glycosyltransferase family 2 protein compare
MMP_RS00120 +0.7 3.3 LysR family transcriptional regulator compare
MMP_RS06370 +0.7 4.0 biotin synthase BioB compare
MMP_RS08275 +0.7 4.1 hypothetical protein compare
MMP_RS06770 +0.7 4.5 DHH family phosphoesterase compare
MMP_RS02605 +0.7 1.0 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS01960 +0.7 0.5 hypothetical protein compare
MMP_RS00325 +0.7 1.6 RNA-binding protein compare
MMP_RS01570 +0.7 1.6 hypothetical protein compare
MMP_RS02290 +0.7 3.3 MBL fold metallo-hydrolase compare
MMP_RS07705 +0.7 4.3 transcriptional regulator compare
MMP_RS04605 +0.6 1.5 cobalt ECF transporter T component CbiQ compare
MMP_RS03485 +0.6 2.1 TIGR00267 family protein compare
MMP_RS05460 +0.6 4.5 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS07835 +0.6 3.1 TldD/PmbA family protein compare
MMP_RS03495 +0.6 3.5 Na/Pi cotransporter family protein compare
MMP_RS01975 +0.6 4.8 hypothetical protein compare
MMP_RS05695 +0.6 3.3 phospholipase D-like domain-containing protein compare
MMP_RS08100 +0.6 3.6 8-amino-7-oxononanoate synthase compare
MMP_RS06485 +0.6 0.7 zinc ribbon domain-containing protein compare
MMP_RS07960 +0.6 3.8 sugar phosphate isomerase/epimerase compare
MMP_RS02595 +0.6 1.1 putative zinc-binding protein compare
MMP_RS00705 +0.6 1.5 hypothetical protein compare
MMP_RS06555 +0.6 2.4 cupin domain-containing protein compare
MMP_RS03245 +0.6 2.1 DNA repair and recombination protein RadB compare
MMP_RS00125 +0.6 1.1 DUF2798 domain-containing protein compare
MMP_RS01865 +0.6 1.2 GPR1/FUN34/YaaH family transporter compare
MMP_RS04050 +0.5 2.7 hypothetical protein compare
MMP_RS08105 +0.5 3.2 6-carboxyhexanoate--CoA ligase compare
MMP_RS05675 +0.5 1.7 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS08725 +0.5 1.3 Ni/Fe hydrogenase subunit alpha compare
MMP_RS08370 +0.5 0.4 cation:proton antiporter subunit C compare
MMP_RS02800 +0.5 2.6 nucleotidyltransferase domain-containing protein compare
MMP_RS02720 +0.5 0.9 molybdate ABC transporter substrate-binding protein compare
MMP_RS08775 +0.5 2.9 methanogenesis marker 9 domain-containing protein compare
MMP_RS02895 +0.5 3.4 DHH family phosphoesterase compare
MMP_RS01775 +0.5 1.3 TIGR00297 family protein compare
MMP_RS05355 +0.5 0.6 hypothetical protein compare
MMP_RS03215 +0.5 3.4 MBL fold metallo-hydrolase compare
MMP_RS02880 +0.5 3.4 AmmeMemoRadiSam system radical SAM enzyme compare
MMP_RS02245 +0.5 1.2 hypothetical protein compare
MMP_RS06590 +0.5 1.5 GNAT family N-acetyltransferase compare
MMP_RS08390 +0.5 2.3 DUF5400 domain-containing protein compare
MMP_RS08215 +0.5 2.0 DUF483 domain-containing protein compare
MMP_RS01150 +0.5 2.7 aldo/keto reductase compare
MMP_RS08350 +0.5 0.6 hypothetical protein compare
MMP_RS07095 +0.5 1.9 PspC domain-containing protein compare
MMP_RS08660 +0.5 2.2 DHH family phosphoesterase compare
MMP_RS07435 +0.4 0.9 GMP synthase subunit A compare
MMP_RS00960 +0.4 2.1 iron export ABC transporter permease subunit FetB compare
MMP_RS00670 +0.4 2.3 TIM barrel protein compare
MMP_RS06545 +0.4 2.0 ferredoxin family protein compare
MMP_RS00530 +0.4 1.8 tRNA pseudouridine(54/55) synthase Pus10 compare
MMP_RS06310 +0.4 1.6 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS08355 +0.4 1.5 Na(+)/H(+) antiporter subunit B compare
MMP_RS08095 +0.4 1.5 dethiobiotin synthase compare
MMP_RS04735 +0.4 2.0 tautomerase family protein compare
MMP_RS00545 +0.4 2.5 XRE family transcriptional regulator compare
MMP_RS00655 +0.4 1.1 hypothetical protein compare
MMP_RS09025 +0.4 0.6 hypothetical protein compare
MMP_RS00975 +0.4 2.8 HD domain-containing protein compare
MMP_RS06335 +0.4 1.9 HAD family hydrolase compare
MMP_RS00740 +0.4 1.3 cyclase family protein compare
MMP_RS03220 +0.4 1.4 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS03150 +0.4 2.7 phosphoglycerate mutase compare
MMP_RS08700 +0.4 2.8 hypothetical protein compare
MMP_RS03330 +0.4 2.8 rubrerythrin family protein compare
MMP_RS08340 +0.4 1.5 4Fe-4S binding protein compare
MMP_RS03145 +0.4 1.4 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS00565 +0.4 2.0 CBS domain-containing protein compare
MMP_RS01645 +0.4 1.4 SWIM zinc finger family protein compare
MMP_RS08380 +0.4 2.5 phosphatase PAP2 family protein compare
MMP_RS03675 +0.4 2.9 RimK family alpha-L-glutamate ligase compare
MMP_RS05825 +0.4 1.2 peptidyl-prolyl cis-trans isomerase compare
MMP_RS05975 +0.4 2.1 hypothetical protein compare
MMP_RS08485 +0.4 1.8 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS01435 +0.4 2.2 DMT family transporter compare
MMP_RS06535 +0.4 2.0 2-oxoacid:acceptor oxidoreductase family protein compare
MMP_RS09050 +0.4 1.8 CAP domain-containing protein compare
MMP_RS05720 +0.4 1.6 signal recognition particle subunit SRP19/SEC65 family protein compare
MMP_RS06325 +0.4 0.7 hypothetical protein compare
MMP_RS02045 +0.4 0.8 tRNA-Met compare
MMP_RS04520 +0.4 1.4 nucleoside deaminase compare
MMP_RS01210 +0.4 2.8 sodium:solute symporter compare
MMP_RS08455 +0.4 1.8 multiprotein bridging factor aMBF1 compare
MMP_RS02870 +0.4 1.9 hypothetical protein compare
MMP_RS01465 +0.4 1.0 hypothetical protein compare
MMP_RS01120 +0.3 1.9 permease compare
MMP_RS00080 +0.3 1.9 RecB-family nuclease compare
MMP_RS07120 +0.3 2.4 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS02000 +0.3 1.3 radical SAM protein compare
MMP_RS00085 +0.3 2.5 DNA cytosine methyltransferase compare
MMP_RS00395 +0.3 0.8 MGMT family protein compare
MMP_RS08365 +0.3 1.3 energy conserving hydrogenase EhbF compare
MMP_RS01950 +0.3 2.2 hypothetical protein compare
MMP_RS02480 +0.3 0.7 hypothetical protein compare
MMP_RS08410 +0.3 1.6 DUF169 domain-containing protein compare
MMP_RS02960 +0.3 2.3 class I SAM-dependent methyltransferase family protein compare
MMP_RS08345 +0.3 2.3 4Fe-4S binding protein compare
MMP_RS03140 +0.3 2.0 hypothetical protein compare
MMP_RS07840 +0.3 1.2 ribonuclease III compare
MMP_RS07650 +0.3 2.4 TldD/PmbA family protein compare
MMP_RS05505 +0.3 1.5 class IV adenylate cyclase compare
MMP_RS01525 +0.3 0.8 nucleoside-diphosphate kinase compare
MMP_RS08630 +0.3 1.5 archaellar assembly protein FlaJ compare
MMP_RS02415 +0.3 1.0 site-specific integrase compare
MMP_RS09060 +0.3 2.3 hypothetical protein compare
MMP_RS05140 +0.3 1.2 helix-turn-helix transcriptional regulator compare
MMP_RS09035 +0.3 1.2 hypothetical protein compare
MMP_RS01830 +0.3 0.5 tRNA-Val compare
MMP_RS00760 +0.3 2.2 branched-chain-amino-acid transaminase compare
MMP_RS07715 +0.3 2.1 YfcE family phosphodiesterase compare
MMP_RS05900 +0.3 1.4 tetratricopeptide repeat protein compare
MMP_RS06500 +0.3 2.3 ATP-binding protein compare
MMP_RS04310 +0.3 1.6 hypothetical protein compare
MMP_RS00430 +0.3 1.2 hypothetical protein compare
MMP_RS03100 +0.3 1.4 hypothetical protein compare
MMP_RS04635 +0.3 1.8 GNAT family N-acetyltransferase compare
MMP_RS02110 +0.3 0.7 hypothetical protein compare
MMP_RS05485 +0.3 2.0 cysteine--tRNA ligase compare
MMP_RS02985 +0.3 0.8 hypothetical protein compare
MMP_RS02230 +0.3 2.0 sodium-dependent transporter compare
MMP_RS07915 +0.3 1.1 DUF4870 domain-containing protein compare
MMP_RS06440 +0.3 1.3 CBS domain-containing protein compare
MMP_RS04965 +0.3 1.9 thioredoxin family protein compare
MMP_RS06910 +0.3 1.7 RlmF-related methyltransferase compare
MMP_RS05665 +0.3 1.6 phosphate ABC transporter permease subunit PstC compare
MMP_RS01675 +0.3 0.6 hypothetical protein compare
MMP_RS02470 +0.3 0.4 helix-turn-helix transcriptional regulator compare
MMP_RS03320 +0.3 0.7 metal-dependent transcriptional regulator compare
MMP_RS00235 +0.3 1.6 HDIG domain-containing protein compare
MMP_RS04740 +0.3 1.1 DUF473 domain-containing protein compare
MMP_RS05895 +0.3 1.5 metallophosphoesterase compare
MMP_RS06060 +0.3 1.5 hypothetical protein compare
MMP_RS04185 +0.3 1.8 aldo/keto reductase compare
MMP_RS05640 +0.3 0.8 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS02610 +0.3 0.9 DUF2162 domain-containing protein compare
MMP_RS04840 +0.3 1.6 response regulator compare
MMP_RS01415 +0.3 1.3 DUF2067 domain-containing protein compare
MMP_RS07090 +0.3 1.2 tRNA (adenine-N1)-methyltransferase compare
MMP_RS07140 +0.3 1.8 TIGR00341 family protein compare
MMP_RS04620 +0.3 1.3 cobalt transporter CbiM compare
MMP_RS04500 +0.3 2.0 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS08235 +0.3 1.7 hypothetical protein compare
MMP_RS08280 +0.3 0.9 proteasome assembly chaperone family protein compare
MMP_RS04280 +0.3 1.7 coenzyme F420-non-reducing hydrogenase subunit gamma compare
MMP_RS01990 +0.2 1.3 hypothetical protein compare
MMP_RS02315 +0.2 1.2 RimK family alpha-L-glutamate ligase compare
MMP_RS01945 +0.2 1.4 DUF4350 domain-containing protein compare
MMP_RS06460 +0.2 1.1 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMP_RS08310 +0.2 0.6 TMEM165/GDT1 family protein compare
MMP_RS05450 +0.2 0.9 CoB--CoM heterodisulfide reductase subunit C compare
MMP_RS02310 +0.2 0.5 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS08415 +0.2 1.0 radical SAM protein compare
MMP_RS05365 +0.2 0.7 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS07335 +0.2 1.1 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMP_RS08335 +0.2 0.9 NADH-quinone oxidoreductase subunit B family protein compare
MMP_RS02300 +0.2 1.4 NAD(P)H-dependent oxidoreductase compare
MMP_RS06495 +0.2 1.1 YkgJ family cysteine cluster protein compare
MMP_RS07590 +0.2 1.7 hypothetical protein compare
MMP_RS06055 +0.2 1.1 peroxiredoxin compare
MMP_RS05960 +0.2 1.6 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS08685 +0.2 1.6 hypothetical protein compare
MMP_RS01160 +0.2 1.3 DMT family transporter compare
MMP_RS00630 +0.2 1.1 ECF transporter S component compare
MMP_RS01065 +0.2 1.8 alpha/beta hydrolase compare
MMP_RS08690 +0.2 0.9 RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress Sodium nitrite across organisms