Experiment set14S676 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete no stress control

200 most important genes:

  gene name fitness t score description  
MMP_RS09020 -6.2 -1.8 hypothetical protein compare
MMP_RS01175 -6.0 -3.4 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS08715 -5.7 -1.9 formylmethanofuran dehydrogenase subunit B compare
MMP_RS05550 -4.9 -0.8 cation:proton antiporter compare
MMP_RS06400 -4.9 -2.0 4Fe-4S binding protein compare
MMP_RS02900 -4.8 -0.8 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS01005 -4.8 -1.1 riboflavin synthase compare
MMP_RS08460 -4.7 -3.2 proteasome-activating nucleotidase compare
MMP_RS07635 -4.5 -8.6 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS01755 -4.5 -1.1 DUF2097 domain-containing protein compare
MMP_RS00300 -4.3 -0.7 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS01020 -4.3 -1.0 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS03315 -3.9 -1.6 ferrous iron transport protein A compare
MMP_RS08210 -3.9 -2.2 phosphatidylglycerophosphatase A compare
MMP_RS04890 -3.8 -0.9 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS08790 -3.8 -2.6 translation initiation factor IF-2 subunit alpha compare
MMP_RS01610 -3.8 -3.3 hypothetical protein compare
MMP_RS06230 -3.7 -3.7 helix-turn-helix domain-containing protein compare
MMP_RS02240 -3.7 -3.2 methanogenesis marker 7 protein compare
MMP_RS06315 -3.7 -0.9 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS01500 -3.6 -2.3 CBS domain-containing protein compare
MMP_RS08635 -3.6 -2.5 UbiA family prenyltransferase compare
MMP_RS07355 -3.5 -1.0 transcription factor S compare
MMP_RS08720 -3.5 -1.6 4Fe-4S binding protein compare
MMP_RS06730 -3.5 -2.3 phosphopantothenate/pantothenate synthetase compare
MMP_RS06020 -3.3 -4.8 archaeoflavoprotein AfpA compare
MMP_RS08820 -3.2 -5.2 hypothetical protein compare
MMP_RS06975 -3.2 -2.5 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS03600 -3.1 -2.7 triose-phosphate isomerase compare
MMP_RS01225 -2.9 -5.2 DUF5379 domain-containing protein compare
MMP_RS07630 -2.8 -1.8 ATP-binding cassette domain-containing protein compare
MMP_RS05920 -2.8 -0.7 50S ribosomal protein L37e compare
MMP_RS07525 -2.7 -8.2 4Fe-4S binding protein compare
MMP_RS06895 -2.7 -1.7 selenocysteine-specific translation elongation factor compare
MMP_RS07600 -2.7 -2.1 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS06355 -2.7 -2.2 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS03580 -2.6 -3.1 signal recognition particle-docking protein FtsY compare
MMP_RS06625 -2.6 -1.9 DNA primase compare
MMP_RS02175 -2.6 -1.0 DUF1611 domain-containing protein compare
MMP_RS04585 -2.5 -9.2 AIR synthase related protein compare
MMP_RS07605 -2.5 -3.1 diadenylate cyclase compare
MMP_RS06685 -2.4 -8.9 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS07445 -2.4 -5.1 helix-turn-helix domain-containing protein compare
MMP_RS06680 -2.3 -9.9 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS01380 -2.3 -4.9 PHP domain-containing protein compare
MMP_RS08645 -2.3 -9.2 UPF0179 family protein compare
MMP_RS05515 -2.3 -7.3 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS04685 -2.3 -2.9 DUF126 domain-containing protein compare
MMP_RS02165 -2.3 -8.1 tRNA-dihydrouridine synthase compare
MMP_RS02280 -2.3 -0.9 DUF211 domain-containing protein compare
MMP_RS02875 -2.3 -10.5 chorismate pyruvate-lyase family protein compare
MMP_RS00305 -2.2 -1.7 phosphoribosyl-ATP diphosphatase compare
MMP_RS03960 -2.2 -0.9 hypothetical protein compare
MMP_RS03640 -2.2 -2.8 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS03015 -2.2 -6.8 GTP 3' 8-cyclase MoaA compare
MMP_RS05430 -2.2 -3.2 TIGR00288 family NYN domain-containing protein compare
MMP_RS00110 -2.2 -2.6 hypothetical protein compare
MMP_RS07005 -2.2 -0.6 4Fe-4S binding protein compare
MMP_RS06340 -2.2 -5.8 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS06295 -2.1 -4.7 methanogenesis marker 14 protein compare
MMP_RS06350 -2.1 -6.2 HesA/MoeB/ThiF family protein compare
MMP_RS01800 -2.1 -2.8 TIGR00303 family protein compare
MMP_RS01795 -2.1 -1.4 methanogenesis marker 6 protein compare
MMP_RS00515 -2.1 -1.0 DUF655 domain-containing protein compare
MMP_RS00130 -2.1 -1.2 nickel-responsive transcriptional regulator NikR compare
MMP_RS00685 -2.0 -2.9 2-phospho-L-lactate guanylyltransferase compare
MMP_RS06110 -2.0 -3.3 ATP-dependent protease LonB compare
MMP_RS03555 -2.0 -6.5 transcriptional regulator compare
MMP_RS01335 -2.0 -2.7 prefoldin subunit beta compare
MMP_RS06345 -2.0 -10.1 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS05265 -2.0 -2.1 2-isopropylmalate synthase compare
MMP_RS07620 -1.9 -4.5 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS00900 -1.9 -1.7 50S ribosomal protein L39e compare
MMP_RS06630 -1.9 -0.8 UPF0058 family protein compare
MMP_RS07615 -1.9 -7.3 energy-coupling factor ABC transporter permease compare
MMP_RS03025 -1.9 -3.5 molybdenum cofactor guanylyltransferase compare
MMP_RS08435 -1.9 -1.8 Era-like GTP-binding protein compare
MMP_RS05845 -1.9 -1.9 tRNA-intron lyase compare
MMP_RS06120 -1.9 -1.8 UPF0147 family protein compare
MMP_RS00895 -1.8 -2.8 hypothetical protein compare
MMP_RS06885 -1.8 -2.0 50S ribosome-binding GTPase compare
MMP_RS00695 -1.8 -0.7 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS07625 -1.8 -2.9 cobalt ECF transporter T component CbiQ compare
MMP_RS03435 -1.8 -1.6 ketol-acid reductoisomerase compare
MMP_RS06015 -1.8 -6.3 flavodoxin family protein compare
MMP_RS04775 -1.8 -3.2 adenosylhomocysteinase compare
MMP_RS07425 -1.8 -4.9 GTP-binding protein compare
MMP_RS07385 -1.8 -2.2 protein translocase SEC61 complex subunit gamma compare
MMP_RS01545 -1.8 -1.0 CBS domain-containing protein compare
MMP_RS06285 -1.8 -1.9 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS03475 -1.7 -0.6 hypothetical protein compare
MMP_RS00115 -1.7 -9.7 radical SAM protein compare
MMP_RS07365 -1.7 -8.5 2-phosphoglycerate kinase compare
MMP_RS06270 -1.7 -3.7 TIGR00300 family protein compare
MMP_RS02195 -1.6 -2.9 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS07200 -1.6 -3.2 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS00725 -1.6 -6.2 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS05865 -1.6 -2.7 hypothetical protein compare
MMP_RS08300 -1.5 -0.8 metal-sulfur cluster assembly factor compare
MMP_RS01830 -1.5 -1.4 tRNA-Val compare
MMP_RS00315 -1.5 -4.6 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS06600 -1.5 -1.2 class III signal peptide-containing protein compare
MMP_RS01980 -1.5 -9.2 trimeric intracellular cation channel family protein compare
MMP_RS01700 -1.4 -0.9 dihydroxy-acid dehydratase compare
MMP_RS03035 -1.4 -3.0 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS05545 -1.4 -4.6 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS01220 -1.4 -3.6 hypothetical protein compare
MMP_RS06200 -1.4 -5.8 M24 family metallopeptidase compare
MMP_RS06175 -1.4 -5.0 winged helix-turn-helix transcriptional regulator compare
MMP_RS07765 -1.4 -6.4 sodium:alanine symporter family protein compare
MMP_RS06215 -1.4 -1.9 30S ribosomal protein S6e compare
MMP_RS06700 -1.3 -6.0 hypothetical protein compare
MMP_RS06725 -1.3 -4.3 hypothetical protein compare
MMP_RS02235 -1.3 -5.4 CBS domain-containing protein compare
MMP_RS07775 -1.3 -3.7 alanine dehydrogenase compare
MMP_RS06475 -1.3 -3.5 FAD-dependent oxidoreductase compare
MMP_RS01075 -1.3 -1.5 hypothetical protein compare
MMP_RS04870 -1.3 -3.5 TIGR02253 family HAD-type hydrolase compare
MMP_RS01985 -1.3 -4.3 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS06855 -1.3 -5.8 hypothetical protein compare
MMP_RS02790 -1.3 -1.1 class III signal peptide-containing protein compare
MMP_RS07545 -1.3 -0.6 HTH domain-containing protein compare
MMP_RS05245 -1.3 -6.3 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS00735 -1.3 -4.1 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS07845 -1.2 -1.0 LL-diaminopimelate aminotransferase compare
MMP_RS07755 -1.2 -1.0 DUF555 domain-containing protein compare
MMP_RS05540 -1.2 -2.5 hypothetical protein compare
MMP_RS05765 -1.2 -4.1 M42 family metallopeptidase compare
MMP_RS07580 -1.2 -1.8 DUF356 domain-containing protein compare
MMP_RS01325 -1.2 -1.2 dihydroneopterin aldolase family protein compare
MMP_RS07700 -1.2 -5.1 DUF1188 domain-containing protein compare
MMP_RS03205 -1.2 -1.1 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS03305 -1.2 -4.6 winged helix-turn-helix domain-containing protein compare
MMP_RS07695 -1.1 -3.3 DUF3236 domain-containing protein compare
MMP_RS00810 -1.1 -4.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS03110 -1.1 -2.8 glycosyltransferase family 2 protein compare
MMP_RS08165 -1.1 -1.5 phosphoglycerate dehydrogenase compare
MMP_RS01495 -1.1 -5.8 TraB/GumN family protein compare
MMP_RS04090 -1.1 -1.3 hypothetical protein compare
MMP_RS02355 -1.1 -1.6 30S ribosomal protein S27ae compare
MMP_RS07750 -1.1 -3.6 DUF357 domain-containing protein compare
MMP_RS05020 -1.1 -1.5 hypothetical protein compare
MMP_RS06105 -1.1 -4.9 hydrogenase maturation peptidase HycI compare
MMP_RS08745 -1.1 -3.1 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS03020 -1.1 -3.3 peptidylprolyl isomerase compare
MMP_RS05835 -1.1 -0.6 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS01085 -1.1 -1.4 hypothetical protein compare
MMP_RS03445 -1.1 -0.7 methanogenesis marker 17 protein compare
MMP_RS01250 -1.1 -3.4 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS00040 -1.1 -4.2 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS05510 -1.1 -4.3 Rrf2 family transcriptional regulator compare
MMP_RS08675 -1.1 -1.8 class III signal peptide-containing protein compare
MMP_RS04850 -1.1 -6.6 UPF0254 family protein compare
MMP_RS02340 -1.0 -1.7 DNA-directed RNA polymerase subunit E'' compare
MMP_RS01280 -1.0 -6.4 DUF515 domain-containing protein compare
MMP_RS01665 -1.0 -2.1 DUF2111 domain-containing protein compare
MMP_RS03400 -1.0 -1.4 archease compare
MMP_RS00985 -1.0 -2.9 CDC48 family AAA ATPase compare
MMP_RS00730 -1.0 -2.8 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS01365 -1.0 -1.2 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS00050 -1.0 -4.1 AarF/UbiB family protein compare
MMP_RS05080 -1.0 -4.8 acetyl-CoA decarbonylase/synthase complex subunit delta compare
MMP_RS07900 -1.0 -2.2 YeeE/YedE family protein compare
MMP_RS05800 -1.0 -4.0 B12-binding domain-containing radical SAM protein compare
MMP_RS08570 -1.0 -4.4 coenzyme F420-0:L-glutamate ligase compare
MMP_RS01385 -0.9 -0.5 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS00290 -0.9 -4.0 hypothetical protein compare
MMP_RS04285 -0.9 -4.8 Ni/Fe hydrogenase subunit alpha compare
MMP_RS01445 -0.9 -3.7 hypothetical protein compare
MMP_RS00185 -0.9 -6.0 potassium channel protein compare
MMP_RS06930 -0.9 -4.9 MBL fold metallo-hydrolase compare
MMP_RS05100 -0.9 -6.5 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMP_RS01960 -0.9 -0.6 hypothetical protein compare
MMP_RS07380 -0.9 -1.2 transcription elongation factor Spt5 compare
MMP_RS00570 -0.9 -1.5 protein-L-isoaspartate O-methyltransferase compare
MMP_RS07685 -0.9 -2.9 TIGR01212 family radical SAM protein compare
MMP_RS05075 -0.9 -5.6 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMP_RS08200 -0.8 -5.7 archaeosine synthase subunit alpha compare
MMP_RS05925 -0.8 -2.1 small nuclear ribonucleoprotein compare
MMP_RS00450 -0.8 -1.2 4Fe-4S binding protein compare
MMP_RS07535 -0.8 -4.3 4Fe-4S binding protein compare
MMP_RS02100 -0.8 -2.2 metallophosphoesterase compare
MMP_RS00675 -0.8 -0.6 nitroreductase family protein compare
MMP_RS06905 -0.8 -1.8 hypothetical protein compare
MMP_RS02110 -0.8 -1.4 hypothetical protein compare
MMP_RS00250 -0.8 -5.6 Flp pilus assembly complex ATPase component TadA compare
MMP_RS08100 -0.8 -3.0 8-amino-7-oxononanoate synthase compare
MMP_RS08760 -0.8 -1.1 hypothetical protein compare
MMP_RS08105 -0.8 -3.4 6-carboxyhexanoate--CoA ligase compare
MMP_RS08225 -0.8 -3.3 RimK family alpha-L-glutamate ligase compare
MMP_RS09055 -0.8 -0.6 CAP domain-containing protein compare
MMP_RS06395 -0.8 -2.4 ThiF family adenylyltransferase compare
MMP_RS06090 -0.8 -4.1 iron ABC transporter permease compare
MMP_RS05635 -0.8 -4.2 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS03300 -0.7 -0.5 TOBE domain-containing protein compare
MMP_RS08915 -0.7 -1.1 2 5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase compare
MMP_RS03470 -0.7 -4.0 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS08855 -0.7 -4.4 hypothetical protein compare
MMP_RS08350 -0.7 -0.5 hypothetical protein compare
MMP_RS01285 -0.7 -3.2 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in no stress control experiments