Experiment set14S675 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS06840 -6.0 -0.7 DNA-directed RNA polymerase subunit N compare
MMP_RS01020 -5.6 -0.7 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS08720 -4.6 -1.1 4Fe-4S binding protein compare
MMP_RS05920 -4.3 -0.5 50S ribosomal protein L37e compare
MMP_RS06350 -4.1 -4.8 HesA/MoeB/ThiF family protein compare
MMP_RS04090 -4.1 -2.5 hypothetical protein compare
MMP_RS00305 -3.9 -1.7 phosphoribosyl-ATP diphosphatase compare
MMP_RS02240 -3.8 -2.5 methanogenesis marker 7 protein compare
MMP_RS06400 -3.8 -1.4 4Fe-4S binding protein compare
MMP_RS03250 -3.7 -2.5 MJ1244 family protein compare
MMP_RS02235 -3.7 -10.1 CBS domain-containing protein compare
MMP_RS03550 -3.5 -1.9 DUF2124 domain-containing protein compare
MMP_RS03315 -3.3 -1.2 ferrous iron transport protein A compare
MMP_RS01225 -3.3 -4.2 DUF5379 domain-containing protein compare
MMP_RS06625 -3.2 -1.6 DNA primase compare
MMP_RS07380 -3.1 -2.1 transcription elongation factor Spt5 compare
MMP_RS00110 -3.1 -2.7 hypothetical protein compare
MMP_RS03600 -2.9 -1.8 triose-phosphate isomerase compare
MMP_RS01175 -2.9 -2.2 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS07005 -2.9 -0.5 4Fe-4S binding protein compare
MMP_RS01005 -2.9 -1.0 riboflavin synthase compare
MMP_RS01755 -2.9 -0.8 DUF2097 domain-containing protein compare
MMP_RS01800 -2.9 -3.4 TIGR00303 family protein compare
MMP_RS04710 -2.7 -1.4 hypothetical protein compare
MMP_RS07635 -2.7 -5.2 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS01380 -2.7 -4.3 PHP domain-containing protein compare
MMP_RS06295 -2.7 -4.9 methanogenesis marker 14 protein compare
MMP_RS01325 -2.7 -1.6 dihydroneopterin aldolase family protein compare
MMP_RS00895 -2.7 -3.4 hypothetical protein compare
MMP_RS00320 -2.6 -1.3 class I SAM-dependent methyltransferase compare
MMP_RS00130 -2.6 -0.9 nickel-responsive transcriptional regulator NikR compare
MMP_RS02900 -2.6 -0.5 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS05700 -2.6 -9.5 TfuA-related McrA-glycine thioamidation protein compare
MMP_RS05460 -2.5 -10.7 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS06285 -2.5 -1.5 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS06730 -2.5 -1.3 phosphopantothenate/pantothenate synthetase compare
MMP_RS06110 -2.4 -3.0 ATP-dependent protease LonB compare
MMP_RS04585 -2.4 -7.8 AIR synthase related protein compare
MMP_RS06725 -2.4 -9.9 hypothetical protein compare
MMP_RS03435 -2.4 -1.6 ketol-acid reductoisomerase compare
MMP_RS08645 -2.4 -6.8 UPF0179 family protein compare
MMP_RS06175 -2.4 -5.3 winged helix-turn-helix transcriptional regulator compare
MMP_RS03640 -2.4 -2.9 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS03205 -2.3 -1.2 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS08210 -2.3 -1.5 phosphatidylglycerophosphatase A compare
MMP_RS01500 -2.3 -1.5 CBS domain-containing protein compare
MMP_RS08715 -2.3 -1.3 formylmethanofuran dehydrogenase subunit B compare
MMP_RS08790 -2.2 -1.9 translation initiation factor IF-2 subunit alpha compare
MMP_RS01665 -2.2 -2.8 DUF2111 domain-containing protein compare
MMP_RS07605 -2.2 -2.8 diadenylate cyclase compare
MMP_RS03445 -2.2 -0.7 methanogenesis marker 17 protein compare
MMP_RS05430 -2.2 -4.7 TIGR00288 family NYN domain-containing protein compare
MMP_RS06885 -2.2 -2.1 50S ribosome-binding GTPase compare
MMP_RS08820 -2.1 -4.6 hypothetical protein compare
MMP_RS07200 -2.1 -5.5 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS08300 -2.0 -0.8 metal-sulfur cluster assembly factor compare
MMP_RS07600 -2.0 -1.7 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS01795 -2.0 -0.9 methanogenesis marker 6 protein compare
MMP_RS00900 -2.0 -1.4 50S ribosomal protein L39e compare
MMP_RS03555 -2.0 -6.5 transcriptional regulator compare
MMP_RS03535 -1.9 -2.5 helix-turn-helix transcriptional regulator compare
MMP_RS04780 -1.9 -2.3 ribonuclease P compare
MMP_RS06120 -1.9 -1.5 UPF0147 family protein compare
MMP_RS08195 -1.9 -6.5 hypothetical protein compare
MMP_RS06230 -1.9 -2.0 helix-turn-helix domain-containing protein compare
MMP_RS08635 -1.9 -1.4 UbiA family prenyltransferase compare
MMP_RS00685 -1.9 -2.6 2-phospho-L-lactate guanylyltransferase compare
MMP_RS06975 -1.9 -1.6 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS02470 -1.8 -1.2 helix-turn-helix transcriptional regulator compare
MMP_RS07820 -1.8 -4.6 UPF0104 family protein compare
MMP_RS05245 -1.8 -8.0 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS05250 -1.8 -2.6 NFYB/HAP3 family transcription factor subunit compare
MMP_RS06020 -1.7 -3.4 archaeoflavoprotein AfpA compare
MMP_RS09020 -1.7 -1.0 hypothetical protein compare
MMP_RS08940 -1.7 -1.0 MetS family NSS transporter small subunit compare
MMP_RS08675 -1.7 -2.4 class III signal peptide-containing protein compare
MMP_RS04685 -1.7 -2.0 DUF126 domain-containing protein compare
MMP_RS02165 -1.7 -6.0 tRNA-dihydrouridine synthase compare
MMP_RS04870 -1.7 -3.7 TIGR02253 family HAD-type hydrolase compare
MMP_RS04890 -1.6 -0.6 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS08200 -1.6 -11.1 archaeosine synthase subunit alpha compare
MMP_RS08460 -1.6 -1.6 proteasome-activating nucleotidase compare
MMP_RS05835 -1.6 -0.5 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS04990 -1.6 -4.4 aquaporin family protein compare
MMP_RS04485 -1.6 -8.9 putative beta-lysine N-acetyltransferase compare
MMP_RS06015 -1.6 -3.4 flavodoxin family protein compare
MMP_RS05440 -1.6 -7.1 winged helix-turn-helix transcriptional regulator compare
MMP_RS04980 -1.6 -6.9 DUF2193 domain-containing protein compare
MMP_RS07525 -1.6 -5.3 4Fe-4S binding protein compare
MMP_RS00115 -1.6 -8.4 radical SAM protein compare
MMP_RS01075 -1.6 -1.3 hypothetical protein compare
MMP_RS01610 -1.6 -1.7 hypothetical protein compare
MMP_RS07445 -1.5 -4.1 helix-turn-helix domain-containing protein compare
MMP_RS05845 -1.5 -1.0 tRNA-intron lyase compare
MMP_RS04985 -1.5 -3.4 DUF2180 family protein compare
MMP_RS00735 -1.5 -2.2 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS03470 -1.5 -6.1 phosphoadenosine phosphosulfate reductase family protein conserved
MMP_RS06895 -1.5 -0.9 selenocysteine-specific translation elongation factor compare
MMP_RS03340 -1.5 -0.7 ABC transporter ATP-binding protein compare
MMP_RS07385 -1.5 -1.7 protein translocase SEC61 complex subunit gamma compare
MMP_RS03960 -1.4 -0.5 hypothetical protein compare
MMP_RS04015 -1.4 -2.2 hypothetical protein compare
MMP_RS08435 -1.4 -1.1 Era-like GTP-binding protein compare
MMP_RS00730 -1.4 -3.2 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS07115 -1.4 -4.5 MBL fold metallo-hydrolase compare
MMP_RS06860 -1.4 -1.2 4Fe-4S binding protein compare
MMP_RS08615 -1.4 -1.6 flagellar protein G compare
MMP_RS07540 -1.4 -2.6 CBS domain-containing protein compare
MMP_RS02875 -1.4 -5.7 chorismate pyruvate-lyase family protein compare
MMP_RS03450 -1.4 -1.7 glycine synthesis protein GlyXS (from data) compare
MMP_RS07620 -1.3 -3.6 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS03080 -1.3 -1.8 universal stress protein compare
MMP_RS06630 -1.3 -0.4 UPF0058 family protein compare
MMP_RS00315 -1.3 -2.6 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS03520 -1.3 -1.4 YwbE family protein compare
MMP_RS05020 -1.3 -2.1 hypothetical protein compare
MMP_RS05815 -1.3 -1.2 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS08400 -1.3 -1.6 MJ0307 family thioredoxin compare
MMP_RS07345 -1.3 -3.0 glycine synthesis protein GlyXL (from data) compare
MMP_RS00185 -1.3 -6.0 potassium channel protein compare
MMP_RS07185 -1.3 -6.3 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS03025 -1.3 -2.7 molybdenum cofactor guanylyltransferase compare
MMP_RS05635 -1.3 -4.5 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS03035 -1.3 -2.1 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS07365 -1.3 -6.3 2-phosphoglycerate kinase compare
MMP_RS08745 -1.2 -3.3 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS02675 -1.2 -1.7 hypothetical protein compare
MMP_RS00945 -1.2 -0.8 PadR family transcriptional regulator compare
MMP_RS01575 -1.2 -2.3 aldolase compare
MMP_RS00035 -1.2 -6.0 DUF2098 family protein compare
MMP_RS08785 -1.2 -0.6 RNA-protein complex protein Nop10 compare
MMP_RS06855 -1.2 -5.7 hypothetical protein compare
MMP_RS07735 -1.2 -0.4 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS05875 -1.2 -2.8 hydroxyethylthiazole kinase compare
MMP_RS04900 -1.2 -8.1 hypothetical protein compare
MMP_RS01745 -1.2 -2.4 AMP phosphorylase compare
MMP_RS03305 -1.2 -4.4 winged helix-turn-helix domain-containing protein compare
MMP_RS06035 -1.2 -5.0 glycosyltransferase family 2 protein compare
MMP_RS05435 -1.2 -3.8 5'/3'-nucleotidase SurE compare
MMP_RS01285 -1.2 -4.5 hypothetical protein compare
MMP_RS03580 -1.2 -1.5 signal recognition particle-docking protein FtsY compare
MMP_RS03020 -1.1 -2.2 peptidylprolyl isomerase compare
MMP_RS04480 -1.1 -7.0 lysine 2 3-aminomutase compare
MMP_RS01655 -1.1 -1.6 DsrE family protein compare
MMP_RS07330 -1.1 -7.9 membrane protein compare
MMP_RS07700 -1.1 -4.4 DUF1188 domain-containing protein compare
MMP_RS01720 -1.1 -1.0 replication factor C large subunit compare
MMP_RS01290 -1.1 -4.8 class III signal peptide-containing protein compare
MMP_RS08290 -1.1 -3.6 DNA-binding protein Alba compare
MMP_RS00520 -1.1 -0.9 RNA polymerase Rpb4 family protein compare
MMP_RS05545 -1.1 -2.2 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS03330 -1.1 -4.3 rubrerythrin family protein compare
MMP_RS07545 -1.0 -0.5 HTH domain-containing protein compare
MMP_RS08860 -1.0 -2.4 MinD/ParA family protein compare
MMP_RS04060 -1.0 -4.0 hypothetical protein compare
MMP_RS01275 -1.0 -2.5 class III signal peptide-containing protein compare
MMP_RS04850 -1.0 -5.2 UPF0254 family protein compare
MMP_RS00245 -1.0 -6.2 type II secretion system F family protein compare
MMP_RS05675 -1.0 -1.5 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS08580 -1.0 -2.6 flagellin compare
MMP_RS08840 -1.0 -4.0 class I SAM-dependent methyltransferase compare
MMP_RS01365 -1.0 -1.0 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS00515 -1.0 -0.5 DUF655 domain-containing protein compare
MMP_RS06430 -1.0 -2.7 6-carboxytetrahydropterin synthase QueD compare
MMP_RS01830 -1.0 -0.7 tRNA-Val compare
MMP_RS03390 -0.9 -2.7 malate dehydrogenase compare
MMP_RS05580 -0.9 -5.2 glycosyltransferase compare
MMP_RS03210 -0.9 -4.9 tRNA guanosine(15) transglycosylase TgtA compare
MMP_RS08915 -0.9 -1.6 2 5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase compare
MMP_RS02695 -0.9 -2.6 formylmethanofuran dehydrogenase subunit A compare
MMP_RS06925 -0.9 -1.1 ribonuclease VapC4 compare
MMP_RS03095 -0.9 -2.5 diphthine synthase compare
MMP_RS03540 -0.9 -2.7 DUF2178 domain-containing protein compare
MMP_RS06340 -0.9 -2.8 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS06920 -0.9 -3.1 AAA family ATPase compare
MMP_RS02985 -0.9 -1.2 hypothetical protein compare
MMP_RS01280 -0.9 -4.1 DUF515 domain-containing protein compare
MMP_RS01270 -0.9 -4.6 prepilin peptidase compare
MMP_RS08600 -0.9 -0.9 flagellar protein D compare
MMP_RS03740 -0.9 -1.6 indolepyruvate oxidoreductase subunit beta compare
MMP_RS00850 -0.9 -2.0 TIGR01177 family methyltransferase compare
MMP_RS02425 -0.9 -1.6 hypothetical protein compare
MMP_RS05695 -0.9 -2.6 phospholipase D-like domain-containing protein compare
MMP_RS00240 -0.9 -4.4 type II secretion system F family protein compare
MMP_RS04420 -0.8 -1.8 LysE family translocator compare
MMP_RS01495 -0.8 -3.6 TraB/GumN family protein compare
MMP_RS06970 -0.8 -2.6 ribosomal protein S18-alanine N-acetyltransferase compare
MMP_RS00720 -0.8 -2.5 metal-dependent hydrolase compare
MMP_RS00725 -0.8 -2.9 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS02100 -0.8 -1.8 metallophosphoesterase compare
MMP_RS08980 -0.8 -1.8 hypothetical protein compare
MMP_RS02195 -0.8 -1.4 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS09010 -0.8 -3.3 hypothetical protein compare
MMP_RS06200 -0.8 -2.4 M24 family metallopeptidase compare
MMP_RS04305 -0.8 -1.1 hypothetical protein compare
MMP_RS03490 -0.8 -0.8 DUF2115 domain-containing protein compare
MMP_RS05345 -0.8 -2.3 hypothetical protein compare
MMP_RS08855 -0.8 -3.6 hypothetical protein compare
MMP_RS01305 -0.8 -5.4 hypothetical protein compare
MMP_RS05865 -0.8 -1.2 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment

For stress Phenazine methosulfate in Methanococcus maripaludis S2

For stress Phenazine methosulfate across organisms