Experiment set14S235 for Enterobacter sp. TBS_079

Compare to:

RCH2_defined_glucose plate, 1:1 coculture with Streptomyces_sp._SAI_041

200 most important genes:

  gene name fitness t score description  
MPMX20_03771 -4.9 -4.8 D-3-phosphoglycerate dehydrogenase compare
MPMX20_04079 -4.5 -1.4 Protein-export membrane protein SecG compare
MPMX20_03812 -4.4 -4.3 dITP/XTP pyrophosphatase compare
MPMX20_00693 -4.3 -3.0 Phosphoserine phosphatase compare
MPMX20_04126 -4.3 -13.2 Glutamate synthase [NADPH] large chain compare
MPMX20_03002 -4.2 -8.6 Histidinol dehydrogenase compare
MPMX20_00712 -4.2 -7.0 Threonine synthase compare
MPMX20_03007 -4.1 -4.0 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_01386 -4.0 -2.8 UDP-glucose 4-epimerase compare
MPMX20_03004 -4.0 -6.2 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_03354 -4.0 -5.5 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_03386 -3.9 -0.8 putative protein YfgJ compare
MPMX20_00711 -3.8 -9.9 Homoserine kinase compare
MPMX20_01813 -3.7 -6.2 hypothetical protein compare
MPMX20_04127 -3.7 -10.3 Glutamate synthase [NADPH] small chain compare
MPMX20_03005 -3.6 -5.0 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_04670 -3.6 -1.5 hypothetical protein compare
MPMX20_01368 -3.6 -3.1 hypothetical protein compare
MPMX20_01354 -3.6 -1.8 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_00556 -3.5 -7.5 Ornithine carbamoyltransferase subunit F compare
MPMX20_03003 -3.5 -6.8 Histidinol-phosphate aminotransferase compare
MPMX20_04520 -3.5 -5.8 Argininosuccinate lyase compare
MPMX20_00225 -3.5 -5.3 Phosphoribosylamine--glycine ligase compare
MPMX20_03641 -3.4 -2.4 Phosphoadenosine phosphosulfate reductase compare
MPMX20_03006 -3.4 -4.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_01958 -3.4 -0.7 Fumarase D compare
MPMX20_04194 -3.4 -1.0 Peptide deformylase compare
MPMX20_00928 -3.4 -10.7 Gamma-glutamyl phosphate reductase compare
MPMX20_04531 -3.4 -9.5 Cystathionine gamma-synthase compare
MPMX20_04484 -3.3 -7.3 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MPMX20_04523 -3.3 -7.3 Acetylornithine deacetylase compare
MPMX20_02770 -3.3 -3.2 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_03090 -3.3 -1.0 Methionine--tRNA ligase compare
MPMX20_02512 -3.3 -5.9 Tryptophan biosynthesis protein TrpCF compare
MPMX20_03001 -3.2 -9.1 ATP phosphoribosyltransferase compare
MPMX20_03681 -3.2 -11.5 Amino-acid acetyltransferase compare
MPMX20_03264 -3.2 -2.2 Chorismate synthase compare
MPMX20_00927 -3.2 -11.9 Glutamate 5-kinase compare
MPMX20_02203 -3.1 -1.3 hypothetical protein compare
MPMX20_01551 -3.1 -5.5 Leucine-responsive regulatory protein compare
MPMX20_00976 -3.1 -3.0 Pyrroline-5-carboxylate reductase compare
MPMX20_01135 -3.0 -5.1 HTH-type transcriptional regulator BetI compare
MPMX20_00492 -3.0 -8.5 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX20_04111 -3.0 -3.3 RNase adapter protein RapZ compare
MPMX20_03468 -3.0 -7.3 T-protein compare
MPMX20_00740 -3.0 -2.1 Carbamoyl-phosphate synthase large chain compare
MPMX20_03247 -3.0 -4.9 Amidophosphoribosyltransferase compare
MPMX20_00544 -3.0 -4.5 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_04077 -2.9 -9.0 Argininosuccinate synthase compare
MPMX20_01097 -2.9 -2.9 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_02494 -2.9 -2.0 Orotidine 5'-phosphate decarboxylase compare
MPMX20_04482 -2.9 -7.3 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
MPMX20_04496 -2.9 -5.9 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_04467 -2.9 -5.0 Diaminopimelate epimerase compare
MPMX20_04552 -2.9 -3.5 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_04162 -2.9 -2.0 3-dehydroquinate dehydratase compare
MPMX20_03443 -2.9 -5.9 Anti-sigma-E factor RseA compare
MPMX20_01370 -2.9 -3.1 Peptidoglycan-associated lipoprotein compare
MPMX20_01566 -2.9 -6.9 Phosphoserine aminotransferase compare
MPMX20_04524 -2.9 -12.1 Phosphoenolpyruvate carboxylase compare
MPMX20_03253 -2.8 -4.3 tRNA pseudouridine synthase A compare
MPMX20_04499 -2.8 -10.3 Dihydroxy-acid dehydratase compare
MPMX20_04730 -2.8 -4.8 hypothetical protein compare
MPMX20_04279 -2.8 -2.3 Shikimate kinase 1 compare
MPMX20_01098 -2.8 -1.9 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_02510 -2.8 -10.4 Anthranilate synthase component 1 compare
MPMX20_01607 -2.7 -1.9 Outer membrane protein A compare
MPMX20_01974 -2.7 -1.4 Riboflavin synthase compare
MPMX20_00829 -2.7 -4.6 Poly(A) polymerase I compare
MPMX20_03153 -2.7 -1.0 hypothetical protein compare
MPMX20_03020 -2.7 -3.7 hypothetical protein compare
MPMX20_02646 -2.7 -1.1 hypothetical protein compare
MPMX20_04105 -2.7 -2.1 Lipopolysaccharide export system protein LptC compare
MPMX20_00710 -2.7 -9.3 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_02755 -2.7 -3.2 KHG/KDPG aldolase compare
MPMX20_04596 -2.7 -8.0 Sensory histidine kinase/phosphatase NtrB compare
MPMX20_01901 -2.6 -1.3 Integration host factor subunit alpha compare
MPMX20_01570 -2.6 -1.7 Integration host factor subunit beta compare
MPMX20_04597 -2.6 -4.7 DNA-binding transcriptional regulator NtrC compare
MPMX20_03008 -2.6 -6.1 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_03017 -2.6 -5.6 hypothetical protein compare
MPMX20_02513 -2.6 -7.4 Tryptophan synthase beta chain compare
MPMX20_03998 -2.6 -10.0 Putative membrane-bound redox modulator Alx compare
MPMX20_03811 -2.6 -1.5 hypothetical protein compare
MPMX20_04521 -2.6 -6.2 Acetylglutamate kinase compare
MPMX20_04262 -2.6 -5.4 Acetylornithine/succinyldiaminopimelate aminotransferase compare
MPMX20_01811 -2.6 -6.8 Transcriptional regulatory protein PhoP compare
MPMX20_04639 -2.6 -0.9 Phosphate-binding protein PstS compare
MPMX20_01353 -2.6 -4.5 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_03390 -2.6 -6.4 Outer membrane protein assembly factor BamB compare
MPMX20_03705 -2.6 -7.0 Diaminopimelate decarboxylase compare
MPMX20_03509 -2.5 -0.8 hypothetical protein compare
MPMX20_04692 -2.5 -1.1 hypothetical protein compare
MPMX20_02737 -2.5 -10.6 Tail-specific protease compare
MPMX20_04427 -2.5 -0.8 5S ribosomal RNA compare
MPMX20_00241 -2.5 -5.8 Glucose-6-phosphate isomerase compare
MPMX20_03426 -2.5 -9.3 Phosphoribosylformylglycinamidine synthase compare
MPMX20_03469 -2.5 -7.9 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_03047 -2.4 -2.4 dCTP deaminase compare
MPMX20_01355 -2.4 -0.5 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_00230 -2.4 -5.3 Homoserine O-succinyltransferase compare
MPMX20_03642 -2.4 -8.2 Sulfite reductase [NADPH] hemoprotein beta-component compare
MPMX20_03440 -2.4 -1.7 Elongation factor 4 compare
MPMX20_04443 -2.4 -1.2 Sec-independent protein translocase protein TatB compare
MPMX20_04501 -2.4 -2.1 Acetolactate synthase isozyme 2 small subunit compare
MPMX20_03635 -2.4 -4.5 Inner membrane protein YgbE compare
MPMX20_01369 -2.3 -6.0 Tol-Pal system protein TolB compare
MPMX20_01349 -2.3 -5.4 Citrate synthase compare
MPMX20_04498 -2.3 -6.5 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_03154 -2.3 -6.9 Inner membrane protein YejM compare
MPMX20_00739 -2.3 -2.3 Carbamoyl-phosphate synthase small chain compare
MPMX20_03338 -2.3 -2.2 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_00831 -2.3 -1.6 RNA polymerase-binding transcription factor DksA compare
MPMX20_04346 -2.3 -10.2 Zinc/cadmium/lead-transporting P-type ATPase compare
MPMX20_00768 -2.3 -9.2 3-isopropylmalate dehydrogenase compare
MPMX20_01073 -2.3 -1.4 Nucleoid-associated protein YbaB compare
MPMX20_00226 -2.3 -3.4 Bifunctional purine biosynthesis protein PurH compare
MPMX20_04522 -2.3 -6.9 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_00766 -2.2 -4.3 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_03408 -2.2 -1.3 Co-chaperone protein HscB compare
MPMX20_02696 -2.2 -4.8 Murein tetrapeptide carboxypeptidase compare
MPMX20_01334 -2.2 -6.9 Phosphoglucomutase compare
MPMX20_01366 -2.2 -2.1 Tol-Pal system protein TolQ compare
MPMX20_01567 -2.2 -3.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_01333 -2.2 -3.3 Negative modulator of initiation of replication compare
MPMX20_03753 -2.2 -2.1 Tyrosine recombinase XerD compare
MPMX20_01286 -2.2 -0.8 Sec-independent protein translocase protein TatE compare
MPMX20_03562 -2.2 -4.2 Transcriptional repressor MprA compare
MPMX20_03986 -2.2 -2.1 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_01969 -2.2 -1.5 Carbonic anhydrase 1 compare
MPMX20_02372 -2.1 -2.4 HTH-type transcriptional repressor NsrR compare
MPMX20_04559 -2.1 -2.7 Superoxide dismutase [Mn] compare
MPMX20_04444 -2.1 -0.6 Sec-independent protein translocase protein TatA compare
MPMX20_03248 -2.1 -3.0 Colicin V production protein compare
MPMX20_01596 -2.1 -5.8 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_04242 -2.1 -1.5 hypothetical protein compare
MPMX20_03490 -2.1 -2.0 SsrA-binding protein compare
MPMX20_03466 -2.1 -7.3 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_01741 -2.1 -1.4 Dihydroorotase compare
MPMX20_04442 -2.1 -1.4 Sec-independent protein translocase protein TatC compare
MPMX20_04377 -2.0 -4.7 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_02668 -2.0 -2.4 hypothetical protein compare
MPMX20_03643 -2.0 -6.9 Sulfite reductase [NADPH] flavoprotein alpha-component compare
MPMX20_04532 -2.0 -1.6 Met repressor compare
MPMX20_03012 -2.0 -5.3 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_02514 -2.0 -2.4 Tryptophan synthase alpha chain compare
MPMX20_01320 -2.0 -7.5 Asparagine synthetase B [glutamine-hydrolyzing] compare
MPMX20_01810 -2.0 -4.5 Virulence sensor histidine kinase PhoQ compare
MPMX20_00109 -2.0 -8.5 hypothetical protein compare
MPMX20_00108 -2.0 -9.2 hypothetical protein compare
MPMX20_04556 -2.0 -5.2 Transcriptional regulatory protein CpxR compare
MPMX20_00540 -2.0 -8.0 Magnesium-transporting ATPase, P-type 1 compare
MPMX20_00258 -2.0 -3.3 Diacylglycerol kinase compare
MPMX20_02757 -2.0 -2.4 Glucose-6-phosphate 1-dehydrogenase compare
MPMX20_01775 -2.0 -4.9 3-oxoacyl-[acyl-carrier-protein] synthase 2 compare
MPMX20_04628 -2.0 -1.4 ATP synthase protein I compare
MPMX20_02275 -2.0 -2.3 Acetyltransferase compare
MPMX20_04374 -2.0 -1.5 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_00728 -2.0 -0.8 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_00825 -1.9 -1.0 Aspartate 1-decarboxylase compare
MPMX20_04768 -1.9 -1.3 hypothetical protein compare
MPMX20_03706 -1.9 -4.8 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX20_02645 -1.9 -3.4 Ribosome-binding ATPase YchF compare
MPMX20_04306 -1.9 -3.3 Glycerol-3-phosphate regulon repressor compare
MPMX20_00386 -1.9 -1.7 hypothetical protein compare
MPMX20_03441 -1.9 -3.8 Protein RseC compare
MPMX20_02591 -1.9 -2.9 DNA-binding protein H-NS compare
MPMX20_00105 -1.9 -8.1 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_02707 -1.9 -1.5 Septum site-determining protein MinC compare
MPMX20_02535 -1.9 -1.2 Pyrimidine-specific ribonucleoside hydrolase RihB compare
MPMX20_02766 -1.9 -1.3 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_01284 -1.9 -5.8 Putative fluoride ion transporter CrcB compare
MPMX20_01029 -1.8 -2.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_04491 -1.8 -3.7 Thioredoxin 1 compare
MPMX20_04275 -1.8 -1.2 Ribulose-phosphate 3-epimerase compare
MPMX20_04298 -1.8 -1.7 hypothetical protein compare
MPMX20_03852 -1.8 -8.2 Cystathionine beta-lyase MetC compare
MPMX20_01352 -1.8 -5.0 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_04375 -1.8 -2.5 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_00110 -1.8 -6.8 hypothetical protein compare
MPMX20_02812 -1.8 -2.4 hypothetical protein compare
MPMX20_02162 -1.8 -2.5 hypothetical protein compare
MPMX20_04641 -1.8 -1.7 Phosphate transport system permease protein PstA compare
MPMX20_04504 -1.8 -1.9 hypothetical protein compare
MPMX20_01768 -1.8 -1.1 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_01043 -1.8 -7.6 Ammonia channel compare
MPMX20_04489 -1.8 -6.3 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_02511 -1.8 -6.3 Bifunctional protein TrpGD compare
MPMX20_01837 -1.8 -2.0 hypothetical protein compare
MPMX20_00453 -1.7 -0.8 RNA-binding protein Hfq compare
MPMX20_04278 -1.7 -1.2 3-dehydroquinate synthase compare
MPMX20_01967 -1.7 -1.4 hypothetical protein compare
MPMX20_03773 -1.7 -4.0 HTH-type transcriptional regulator ArgP compare
MPMX20_03227 -1.7 -2.4 Phosphate acetyltransferase compare
MPMX20_01995 -1.7 -3.3 Transcriptional regulator SlyA compare
MPMX20_00542 -1.7 -3.3 2-iminobutanoate/2-iminopropanoate deaminase compare
MPMX20_00045 -1.7 -3.1 Acetyl-CoA acetyltransferase compare
MPMX20_00767 -1.7 -5.6 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_02121 -1.7 -2.3 hypothetical protein compare
MPMX20_01550 -1.7 -1.7 Thioredoxin reductase compare


Specific Phenotypes

For 7 genes in this experiment

For mixed community RCH2_defined_glucose plate, 1:1 coculture with Streptomyces_sp._SAI_041 in Enterobacter sp. TBS_079

For mixed community RCH2_defined_glucose plate, 1:1 coculture with Streptomyces_sp._SAI_041 across organisms