Experiment set14S235 for Enterobacter sp. TBS_079

Compare to:

RCH2_defined_glucose plate, 1:1 coculture with Streptomyces_sp._SAI_041

200 most detrimental genes:

  gene name fitness t score description  
MPMX20_00136 +3.0 1.5 hypothetical protein compare
MPMX20_00459 +2.6 4.3 HTH-type transcriptional repressor NsrR compare
MPMX20_00626 +2.4 2.5 hypothetical protein compare
MPMX20_00523 +2.4 2.6 hypothetical protein compare
MPMX20_02326 +2.3 2.3 hypothetical protein compare
MPMX20_00338 +2.2 2.1 Cytoskeleton-binding toxin CbtA compare
MPMX20_01363 +2.1 3.3 Cytochrome bd-I ubiquinol oxidase subunit X compare
MPMX20_01906 +2.0 6.8 Anti-FlhC(2)FlhD(4) factor YdiV compare
MPMX20_03447 +2.0 2.8 ATP-dependent RNA helicase SrmB compare
MPMX20_01781 +2.0 2.6 PTS system glucose-specific EIICB component compare
MPMX20_04572 +1.9 1.2 hypothetical protein compare
MPMX20_04119 +1.9 1.7 DNA polymerase III subunit chi compare
MPMX20_00213 +1.9 2.4 Thiazole synthase compare
MPMX20_03965 +1.8 2.6 hypothetical protein compare
MPMX20_01952 +1.8 1.5 hypothetical protein compare
MPMX20_04595 +1.7 0.9 Glutamine synthetase compare
MPMX20_04543 +1.6 7.2 Glycerol kinase compare
MPMX20_01466 +1.6 3.9 Molybdopterin-synthase adenylyltransferase compare
MPMX20_03449 +1.6 2.3 Uracil-DNA glycosylase compare
MPMX20_00639 +1.6 1.3 5-carboxymethyl-2-hydroxymuconate Delta-isomerase compare
MPMX20_04008 +1.5 2.5 Inner membrane protein YqjE compare
MPMX20_01478 +1.5 3.2 Deoxyribose operon repressor compare
MPMX20_03382 +1.5 1.0 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_01134 +1.5 1.9 hypothetical protein compare
MPMX20_04100 +1.4 1.5 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX20_04170 +1.4 2.1 DNA-binding protein Fis compare
MPMX20_03262 +1.4 1.2 putative membrane transporter protein YfcA compare
MPMX20_01381 +1.4 1.6 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive compare
MPMX20_01625 +1.4 1.4 tRNA-Ser compare
MPMX20_03788 +1.4 2.5 hypothetical protein compare
MPMX20_04094 +1.4 1.6 hypothetical protein compare
MPMX20_00030 +1.3 2.0 hypothetical protein compare
MPMX20_04299 +1.3 1.3 Pimeloyl-[acyl-carrier protein] methyl ester esterase compare
MPMX20_03320 +1.3 1.8 Inner membrane protein YfeZ compare
MPMX20_04180 +1.3 3.1 Glutamine transport ATP-binding protein GlnQ compare
MPMX20_01905 +1.3 11.0 Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase compare
MPMX20_04003 +1.3 1.6 Putative L-lactate dehydrogenase operon regulatory protein compare
MPMX20_02395 +1.3 3.3 Glutathione S-transferase GST-6.0 compare
MPMX20_01919 +1.3 1.3 putative protein YdiE compare
MPMX20_01230 +1.3 2.2 HTH-type transcriptional regulator BetI compare
MPMX20_01894 +1.3 2.0 putative protein YniD compare
MPMX20_00683 +1.3 2.7 Purine nucleoside phosphorylase DeoD-type compare
MPMX20_04371 +1.3 2.3 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX20_00705 +1.3 1.8 Transcriptional regulatory protein CreB compare
MPMX20_03905 +1.3 3.5 Urease accessory protein UreG compare
MPMX20_02437 +1.3 2.2 hypothetical protein compare
MPMX20_00746 +1.3 1.5 Protein ApaG compare
MPMX20_01903 +1.2 2.0 Thioredoxin/glutathione peroxidase BtuE compare
MPMX20_00494 +1.2 1.3 hypothetical protein compare
MPMX20_01467 +1.2 3.8 Molybdopterin molybdenumtransferase compare
MPMX20_01324 +1.2 1.9 Glucosamine-6-phosphate deaminase compare
MPMX20_00545 +1.2 1.7 Arginine repressor compare
MPMX20_03204 +1.2 2.6 Ribonuclease BN compare
MPMX20_00929 +1.2 1.8 tRNA-Thr compare
MPMX20_04138 +1.2 2.9 Periplasmic pH-dependent serine endoprotease DegQ compare
MPMX20_04561 +1.2 3.0 HTH-type transcriptional activator RhaR compare
MPMX20_04345 +1.2 2.7 hypothetical protein compare
MPMX20_02157 +1.2 1.4 hypothetical protein compare
MPMX20_01829 +1.2 4.3 Diguanylate cyclase DgcP compare
MPMX20_02443 +1.2 2.1 Zinc transport protein ZntB compare
MPMX20_00709 +1.2 1.4 putative tRNA/rRNA methyltransferase compare
MPMX20_01885 +1.2 3.9 Inner membrane protein YdjM compare
MPMX20_04542 +1.1 4.6 Glycerol uptake facilitator protein compare
MPMX20_01358 +1.1 0.9 Mannosyl-D-glycerate transport/metabolism system repressor MngR compare
MPMX20_03825 +1.1 2.3 Citrate lyase subunit beta compare
MPMX20_04053 +1.1 1.6 DnaA initiator-associating protein DiaA compare
MPMX20_01410 +1.1 3.0 GTP 3',8-cyclase compare
MPMX20_01691 +1.1 1.0 hypothetical protein compare
MPMX20_04424 +1.1 2.9 Endoglucanase compare
MPMX20_02618 +1.1 2.5 Nitrate/nitrite response regulator protein NarL compare
MPMX20_03655 +1.1 4.8 Signal transduction histidine-protein kinase BarA compare
MPMX20_02520 +1.1 1.8 hypothetical protein compare
MPMX20_02926 +1.1 0.9 hypothetical protein compare
MPMX20_03217 +1.1 2.5 NADH-quinone oxidoreductase subunit B compare
MPMX20_01890 +1.0 1.9 hypothetical protein compare
MPMX20_00785 +1.0 1.9 D-alanine--D-alanine ligase B compare
MPMX20_01439 +1.0 2.3 Glutamine transport system permease protein GlnP compare
MPMX20_01413 +1.0 2.1 Molybdopterin synthase sulfur carrier subunit compare
MPMX20_00650 +1.0 1.2 hypothetical protein compare
MPMX20_01479 +1.0 1.9 Putative undecaprenyl-diphosphatase YbjG compare
MPMX20_00843 +1.0 1.0 hypothetical protein compare
MPMX20_03225 +1.0 1.0 hypothetical protein compare
MPMX20_03475 +1.0 1.5 hypothetical protein compare
MPMX20_02182 +1.0 1.3 hypothetical protein compare
MPMX20_02248 +1.0 2.0 hypothetical protein compare
MPMX20_01188 +1.0 1.4 hypothetical protein compare
MPMX20_01414 +1.0 2.6 Molybdopterin synthase catalytic subunit compare
MPMX20_02879 +1.0 0.9 hypothetical protein compare
MPMX20_00913 +1.0 2.0 hypothetical protein compare
MPMX20_00393 +1.0 2.2 hypothetical protein compare
MPMX20_02439 +1.0 1.3 hypothetical protein compare
MPMX20_02912 +1.0 0.8 hypothetical protein compare
MPMX20_01535 +1.0 3.5 Hydroxylamine reductase compare
MPMX20_04268 +1.0 1.6 Cytosine deaminase compare
MPMX20_00680 +1.0 1.1 Deoxyribose-phosphate aldolase compare
MPMX20_00764 +1.0 1.0 hypothetical protein compare
MPMX20_04161 +1.0 1.3 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ compare
MPMX20_03170 +1.0 3.5 Magnesium transporter MgtE compare
MPMX20_01447 +1.0 2.7 Transcriptional regulator MntR compare
MPMX20_00224 +1.0 2.3 hypothetical protein compare
MPMX20_03966 +1.0 1.8 hypothetical protein compare
MPMX20_00679 +1.0 2.7 putative protein YjjI compare
MPMX20_02803 +1.0 2.0 Universal stress protein C compare
MPMX20_04456 +1.0 1.5 Homoserine/homoserine lactone efflux protein compare
MPMX20_01558 +1.0 3.3 Anaerobic dimethyl sulfoxide reductase chain C compare
MPMX20_04567 +1.0 2.0 Melibiose permease compare
MPMX20_00388 +1.0 0.6 hypothetical protein compare
MPMX20_04760 +1.0 2.6 IS3 family transposase ISRaq1 compare
MPMX20_03432 +0.9 2.8 HTH-type transcriptional regulator MurR compare
MPMX20_03569 +0.9 2.3 Inner membrane protein YqaA compare
MPMX20_03197 +0.9 1.7 o-succinylbenzoate synthase compare
MPMX20_01198 +0.9 3.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX20_02704 +0.9 1.1 hypothetical protein compare
MPMX20_03110 +0.9 3.4 Cryptic beta-glucoside bgl operon antiterminator compare
MPMX20_00222 +0.9 1.0 hypothetical protein compare
MPMX20_00340 +0.9 1.4 hypothetical protein compare
MPMX20_04154 +0.9 1.1 dTTP/UTP pyrophosphatase compare
MPMX20_03345 +0.9 1.7 putative protein YfgD compare
MPMX20_03048 +0.9 2.0 Uridine kinase compare
MPMX20_01855 +0.9 1.9 hypothetical protein compare
MPMX20_02990 +0.9 2.4 putative FMN/FAD exporter YeeO compare
MPMX20_04013 +0.9 1.7 HTH-type transcriptional regulator YhaJ compare
MPMX20_04230 +0.9 1.7 Bacterioferritin compare
MPMX20_00813 +0.9 1.7 hypothetical protein compare
MPMX20_03674 +0.9 1.6 Sulfur acceptor protein CsdE compare
MPMX20_01686 +0.9 1.1 putative HTH-type transcriptional regulator YybR compare
MPMX20_01999 +0.9 2.1 Membrane-bound lysozyme inhibitor of C-type lysozyme compare
MPMX20_04293 +0.9 1.1 Transcription elongation factor GreB compare
MPMX20_04038 +0.9 2.8 Glucitol operon repressor compare
MPMX20_01853 +0.9 2.9 DNA topoisomerase 3 compare
MPMX20_04527 +0.9 2.0 Glycerol dehydrogenase compare
MPMX20_02507 +0.9 1.3 Ribosomal large subunit pseudouridine synthase B compare
MPMX20_02116 +0.9 1.3 hypothetical protein compare
MPMX20_04009 +0.9 2.1 hypothetical protein compare
MPMX20_02750 +0.9 1.8 hypothetical protein compare
MPMX20_02469 +0.9 2.0 Phage shock protein D compare
MPMX20_00480 +0.9 0.6 50S ribosomal protein L9 compare
MPMX20_02751 +0.9 2.4 Exodeoxyribonuclease 10 compare
MPMX20_04360 +0.9 1.2 Acyl carrier protein compare
MPMX20_02134 +0.9 1.2 hypothetical protein compare
MPMX20_03828 +0.9 1.7 hypothetical protein compare
MPMX20_00904 +0.9 2.5 Vitamin B12 import ATP-binding protein BtuD compare
MPMX20_03359 +0.9 2.1 Protein YfgG compare
MPMX20_02616 +0.8 3.9 Nitrate/nitrite transporter NarK compare
MPMX20_00210 +0.8 1.3 PTS system cellobiose-specific EIIB component compare
MPMX20_01457 +0.8 1.7 putative ABC transporter ATP-binding protein YbiT compare
MPMX20_01344 +0.8 2.0 GTP cyclohydrolase 1 type 2 compare
MPMX20_04722 +0.8 1.8 hypothetical protein compare
MPMX20_00811 +0.8 2.3 hypothetical protein compare
MPMX20_03446 +0.8 1.7 tRNA1(Val) (adenine(37)-N6)-methyltransferase compare
MPMX20_01244 +0.8 1.6 Ferric enterobactin transport system permease protein FepD compare
MPMX20_02094 +0.8 2.4 Putative transporter YdfJ compare
MPMX20_04297 +0.8 1.4 putative [Fe-S]-dependent transcriptional repressor FeoC compare
MPMX20_00476 +0.8 2.3 hypothetical protein compare
MPMX20_02613 +0.8 1.5 Nitrate reductase molybdenum cofactor assembly chaperone NarJ compare
MPMX20_03337 +0.8 2.0 hypothetical protein compare
MPMX20_01664 +0.8 1.9 1-carboxybiuret hydrolase subunit AtzE compare
MPMX20_00065 +0.8 2.1 Purine ribonucleoside efflux pump NepI compare
MPMX20_03102 +0.8 1.7 Phosphinothricin N-acetyltransferase compare
MPMX20_03660 +0.8 2.3 hypothetical protein compare
MPMX20_03256 +0.8 1.8 Flagellar regulator flk compare
MPMX20_01608 +0.8 1.9 Cell division inhibitor SulA compare
MPMX20_02905 +0.8 1.2 hypothetical protein compare
MPMX20_03561 +0.8 1.8 putative transporter compare
MPMX20_02612 +0.8 2.5 Respiratory nitrate reductase 1 gamma chain compare
MPMX20_01481 +0.8 2.2 Multidrug transporter MdfA compare
MPMX20_03026 +0.8 2.2 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase GtfA subunit compare
MPMX20_01050 +0.8 1.7 hypothetical protein compare
MPMX20_00719 +0.8 2.0 Succinate-acetate/proton symporter SatP compare
MPMX20_00223 +0.8 2.9 DNA-binding protein HU-alpha compare
MPMX20_03208 +0.8 2.3 NADH-quinone oxidoreductase subunit L compare
MPMX20_03029 +0.8 2.2 UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase compare
MPMX20_04343 +0.8 2.1 hypothetical protein compare
MPMX20_03164 +0.8 2.6 hypothetical protein compare
MPMX20_03117 +0.8 1.6 Gamma-glutamylputrescine synthetase PuuA compare
MPMX20_00891 +0.8 1.3 2,5-diketo-D-gluconic acid reductase B compare
MPMX20_01756 +0.8 2.4 Flagellar basal-body rod protein FlgF compare
MPMX20_02795 +0.8 1.4 hypothetical protein compare
MPMX20_03474 +0.8 2.9 hypothetical protein compare
MPMX20_01059 +0.8 2.2 HTH-type transcriptional regulatory protein GabR compare
MPMX20_00247 +0.8 1.2 hypothetical protein compare
MPMX20_02250 +0.8 2.4 Aliphatic amidase expression-regulating protein compare
MPMX20_02350 +0.8 2.3 Sucrose porin compare
MPMX20_01201 +0.8 2.0 hypothetical protein compare
MPMX20_04372 +0.8 1.8 3-oxoacyl-[acyl-carrier-protein] synthase 2 compare
MPMX20_04566 +0.8 1.3 L-rhamnose mutarotase compare
MPMX20_02351 +0.8 1.4 Fructokinase compare
MPMX20_01860 +0.8 1.9 Thiamine import ATP-binding protein ThiQ compare
MPMX20_01248 +0.8 2.2 Enterobactin synthase component E compare
MPMX20_03626 +0.8 1.4 hypothetical protein compare
MPMX20_02927 +0.8 1.9 hypothetical protein compare
MPMX20_01793 +0.8 1.7 Multiple stress resistance protein BhsA compare
MPMX20_02376 +0.8 1.2 Formate dehydrogenase, nitrate-inducible, cytochrome b556(Fdn) subunit compare
MPMX20_02986 +0.8 2.1 Fosfomycin resistance protein AbaF compare
MPMX20_01615 +0.8 1.0 putative protein YccU compare
MPMX20_01449 +0.8 2.6 Colistin resistance protein EmrA compare
MPMX20_02047 +0.7 2.9 hypothetical protein compare
MPMX20_03244 +0.7 1.4 Histidine-binding periplasmic protein compare
MPMX20_04287 +0.7 2.4 GMP/IMP nucleotidase YrfG compare
MPMX20_01603 +0.7 1.9 Intermembrane transport lipoprotein PqiC compare


Specific Phenotypes

For 7 genes in this experiment

For mixed community RCH2_defined_glucose plate, 1:1 coculture with Streptomyces_sp._SAI_041 in Enterobacter sp. TBS_079

For mixed community RCH2_defined_glucose plate, 1:1 coculture with Streptomyces_sp._SAI_041 across organisms