Experiment set14S222 for Enterobacter sp. TBS_079

Compare to:

TSB plate, 1:1 coculture with Bacillus_pumilus_TBS_103

200 most important genes:

  gene name fitness t score description  
MPMX20_03986 -4.9 -3.8 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_03390 -4.8 -3.3 Outer membrane protein assembly factor BamB compare
MPMX20_01101 -4.7 -2.2 Peptidyl-prolyl cis-trans isomerase B compare
MPMX20_01370 -4.7 -3.1 Peptidoglycan-associated lipoprotein compare
MPMX20_04519 -4.4 -3.0 Hydrogen peroxide-inducible genes activator compare
MPMX20_04344 -4.4 -1.8 hypothetical protein compare
MPMX20_01368 -4.2 -2.9 hypothetical protein compare
MPMX20_04231 -4.1 -1.7 Bacterioferritin-associated ferredoxin compare
MPMX20_01570 -4.0 -2.1 Integration host factor subunit beta compare
MPMX20_02344 -3.9 -1.5 hypothetical protein compare
MPMX20_01369 -3.8 -3.7 Tol-Pal system protein TolB compare
MPMX20_01354 -3.8 -2.2 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_02672 -3.6 -9.6 hypothetical protein compare
MPMX20_01366 -3.5 -2.4 Tol-Pal system protein TolQ compare
MPMX20_02657 -3.5 -10.0 hypothetical protein compare
MPMX20_03090 -3.4 -1.2 Methionine--tRNA ligase compare
MPMX20_01367 -3.4 -2.3 Tol-Pal system protein TolR compare
MPMX20_03443 -3.3 -6.4 Anti-sigma-E factor RseA compare
MPMX20_04111 -3.3 -3.8 RNase adapter protein RapZ compare
MPMX20_00740 -3.3 -3.2 Carbamoyl-phosphate synthase large chain compare
MPMX20_01333 -3.1 -3.7 Negative modulator of initiation of replication compare
MPMX20_04552 -3.1 -4.2 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_00708 -3.1 -3.0 Aerobic respiration control protein ArcA compare
MPMX20_04484 -3.0 -7.3 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MPMX20_03153 -3.0 -1.2 hypothetical protein compare
MPMX20_01810 -2.9 -12.1 Virulence sensor histidine kinase PhoQ compare
MPMX20_00197 -2.9 -1.2 tRNA-Tyr compare
MPMX20_04141 -2.8 -6.2 Arginine repressor compare
MPMX20_04374 -2.8 -1.8 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_04427 -2.8 -0.9 5S ribosomal RNA compare
MPMX20_02767 -2.8 -1.9 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_03641 -2.8 -4.6 Phosphoadenosine phosphosulfate reductase compare
MPMX20_03309 -2.8 -1.8 Phosphocarrier protein HPr compare
MPMX20_03756 -2.7 -3.6 FAD assembly factor SdhE compare
MPMX20_01030 -2.7 -4.2 Lon protease compare
MPMX20_04482 -2.7 -8.4 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
MPMX20_04443 -2.7 -1.6 Sec-independent protein translocase protein TatB compare
MPMX20_00544 -2.7 -4.1 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_02494 -2.7 -3.7 Orotidine 5'-phosphate decarboxylase compare
MPMX20_00998 -2.7 -3.3 Sec translocon accessory complex subunit YajC compare
MPMX20_04067 -2.7 -4.8 Lipoprotein NlpI compare
MPMX20_03509 -2.6 -0.9 hypothetical protein compare
MPMX20_00739 -2.6 -2.6 Carbamoyl-phosphate synthase small chain compare
MPMX20_02737 -2.6 -11.5 Tail-specific protease compare
MPMX20_01550 -2.6 -2.4 Thioredoxin reductase compare
MPMX20_01734 -2.5 -5.2 Lipid A biosynthesis lauroyltransferase compare
MPMX20_01353 -2.5 -4.6 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_03408 -2.5 -1.6 Co-chaperone protein HscB compare
MPMX20_03334 -2.5 -0.8 hypothetical protein compare
MPMX20_01355 -2.5 -0.6 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_02635 -2.5 -1.9 Release factor glutamine methyltransferase compare
MPMX20_00749 -2.5 -2.9 Chaperone SurA compare
MPMX20_03580 -2.5 -2.9 Protein RecA compare
MPMX20_03344 -2.5 -8.2 Beta-barrel assembly-enhancing protease compare
MPMX20_01098 -2.4 -3.3 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_00108 -2.4 -12.5 hypothetical protein compare
MPMX20_01350 -2.4 -4.1 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_00720 -2.4 -1.0 Chaperone protein DnaK compare
MPMX20_03226 -2.4 -1.6 Acetate kinase compare
MPMX20_04768 -2.3 -1.6 hypothetical protein compare
MPMX20_04442 -2.3 -1.6 Sec-independent protein translocase protein TatC compare
MPMX20_04306 -2.3 -4.4 Glycerol-3-phosphate regulon repressor compare
MPMX20_01969 -2.3 -1.6 Carbonic anhydrase 1 compare
MPMX20_01156 -2.3 -3.3 hypothetical protein compare
MPMX20_03095 -2.3 -1.6 hypothetical protein compare
MPMX20_04444 -2.3 -0.8 Sec-independent protein translocase protein TatA compare
MPMX20_01596 -2.3 -7.1 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_00494 -2.3 -2.3 hypothetical protein compare
MPMX20_01741 -2.3 -1.6 Dihydroorotase compare
MPMX20_03338 -2.2 -2.7 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_00109 -2.2 -9.9 hypothetical protein compare
MPMX20_04276 -2.2 -3.4 DNA adenine methylase compare
MPMX20_00728 -2.2 -1.0 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_04110 -2.2 -4.2 Nitrogen regulatory protein compare
MPMX20_04730 -2.2 -3.5 hypothetical protein compare
MPMX20_03932 -2.2 -2.8 hypothetical protein compare
MPMX20_04465 -2.1 -1.5 Tyrosine recombinase XerC compare
MPMX20_03442 -2.1 -4.0 Sigma-E factor regulatory protein RseB compare
MPMX20_00831 -2.1 -2.2 RNA polymerase-binding transcription factor DksA compare
MPMX20_04008 -2.1 -2.7 Inner membrane protein YqjE compare
MPMX20_04275 -2.1 -1.4 Ribulose-phosphate 3-epimerase compare
MPMX20_01722 -2.1 -1.0 putative csgAB operon transcriptional regulatory protein compare
MPMX20_04670 -2.1 -1.9 hypothetical protein compare
MPMX20_01334 -2.1 -6.6 Phosphoglucomutase compare
MPMX20_01295 -2.1 -2.7 Ribosomal RNA large subunit methyltransferase H compare
MPMX20_01567 -2.1 -4.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_04532 -2.1 -1.8 Met repressor compare
MPMX20_04557 -2.0 -5.9 Sensor histidine kinase CpxA compare
MPMX20_00693 -2.0 -4.5 Phosphoserine phosphatase compare
MPMX20_01984 -2.0 -1.2 Ribonuclease T compare
MPMX20_00540 -2.0 -10.0 Magnesium-transporting ATPase, P-type 1 compare
MPMX20_00110 -2.0 -8.6 hypothetical protein compare
MPMX20_03047 -2.0 -3.6 dCTP deaminase compare
MPMX20_00453 -2.0 -1.0 RNA-binding protein Hfq compare
MPMX20_00441 -2.0 -1.3 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_01073 -2.0 -1.8 Nucleoid-associated protein YbaB compare
MPMX20_04162 -2.0 -3.5 3-dehydroquinate dehydratase compare
MPMX20_03490 -2.0 -3.0 SsrA-binding protein compare
MPMX20_01566 -2.0 -6.6 Phosphoserine aminotransferase compare
MPMX20_03012 -1.9 -5.9 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_02766 -1.9 -1.3 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_01029 -1.9 -2.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_03013 -1.9 -2.9 dTDP-glucose 4,6-dehydratase compare
MPMX20_01811 -1.9 -2.9 Transcriptional regulatory protein PhoP compare
MPMX20_03163 -1.9 -1.3 hypothetical protein compare
MPMX20_03773 -1.9 -2.8 HTH-type transcriptional regulator ArgP compare
MPMX20_03753 -1.9 -3.6 Tyrosine recombinase XerD compare
MPMX20_04242 -1.8 -1.6 hypothetical protein compare
MPMX20_02707 -1.8 -1.6 Septum site-determining protein MinC compare
MPMX20_04393 -1.8 -3.0 Low-affinity inorganic phosphate transporter 1 compare
MPMX20_04140 -1.8 -5.5 Malate dehydrogenase compare
MPMX20_04346 -1.8 -7.5 Zinc/cadmium/lead-transporting P-type ATPase compare
MPMX20_00105 -1.8 -7.4 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_01097 -1.8 -4.2 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_00801 -1.7 -1.8 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_03678 -1.7 -0.8 tRNA-Met compare
MPMX20_01488 -1.7 -1.2 hypothetical protein compare
MPMX20_01065 -1.7 -3.5 Multidrug efflux pump subunit AcrA compare
MPMX20_03463 -1.7 -4.6 Ribosomal large subunit pseudouridine synthase D compare
MPMX20_04301 -1.7 -2.2 Fe/S biogenesis protein NfuA compare
MPMX20_01950 -1.7 -1.2 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_04597 -1.7 -5.5 DNA-binding transcriptional regulator NtrC compare
MPMX20_01281 -1.7 -3.6 hypothetical protein compare
MPMX20_02645 -1.7 -4.2 Ribosome-binding ATPase YchF compare
MPMX20_00093 -1.7 -2.6 Orotate phosphoribosyltransferase compare
MPMX20_04375 -1.7 -3.0 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_04721 -1.7 -3.0 hypothetical protein compare
MPMX20_01901 -1.7 -1.2 Integration host factor subunit alpha compare
MPMX20_02295 -1.6 -0.9 hypothetical protein compare
MPMX20_02696 -1.6 -4.8 Murein tetrapeptide carboxypeptidase compare
MPMX20_00452 -1.6 -4.8 tRNA dimethylallyltransferase compare
MPMX20_04278 -1.6 -2.2 3-dehydroquinate synthase compare
MPMX20_00812 -1.6 -1.1 Aconitate hydratase B compare
MPMX20_01974 -1.6 -1.3 Riboflavin synthase compare
MPMX20_00226 -1.6 -4.6 Bifunctional purine biosynthesis protein PurH compare
MPMX20_04466 -1.6 -2.0 hypothetical protein compare
MPMX20_03780 -1.6 -2.4 Transketolase 1 compare
MPMX20_00106 -1.6 -1.1 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_00747 -1.6 -2.6 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_04467 -1.6 -3.0 Diaminopimelate epimerase compare
MPMX20_03850 -1.6 -3.4 Biopolymer transport protein ExbD compare
MPMX20_04200 -1.6 -3.7 HTH-type transcriptional regulator ZntR compare
MPMX20_00241 -1.5 -5.5 Glucose-6-phosphate isomerase compare
MPMX20_00038 -1.5 -2.9 hypothetical protein compare
MPMX20_02476 -1.5 -1.9 Putrescine export system permease protein SapC compare
MPMX20_01837 -1.5 -1.8 hypothetical protein compare
MPMX20_03590 -1.5 -1.9 hypothetical protein compare
MPMX20_03010 -1.5 -1.1 UDP-glucose 4-epimerase compare
MPMX20_02782 -1.5 -4.9 Flagellar protein FlhE compare
MPMX20_01351 -1.5 -2.6 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_01775 -1.5 -4.5 3-oxoacyl-[acyl-carrier-protein] synthase 2 compare
MPMX20_04308 -1.5 -3.1 Thiosulfate sulfurtransferase GlpE compare
MPMX20_02770 -1.5 -2.7 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_00807 -1.5 -1.8 Pyruvate dehydrogenase E1 component compare
MPMX20_00611 -1.5 -2.0 hypothetical protein compare
MPMX20_03014 -1.5 -7.3 6-phosphogluconate dehydrogenase, decarboxylating compare
MPMX20_02757 -1.5 -2.6 Glucose-6-phosphate 1-dehydrogenase compare
MPMX20_02576 -1.5 -2.1 Protein TonB compare
MPMX20_03227 -1.5 -2.9 Phosphate acetyltransferase compare
MPMX20_03290 -1.5 -0.7 tRNA-Ala compare
MPMX20_02776 -1.4 -3.5 tRNA U34 carboxymethyltransferase compare
MPMX20_00492 -1.4 -4.8 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX20_03394 -1.4 -2.0 Cytoskeleton protein RodZ compare
MPMX20_01446 -1.4 -1.5 Small protein MntS compare
MPMX20_03806 -1.4 -1.8 hypothetical protein compare
MPMX20_01349 -1.4 -3.9 Citrate synthase compare
MPMX20_01972 -1.4 -0.7 tRNA-Val compare
MPMX20_02755 -1.4 -2.6 KHG/KDPG aldolase compare
MPMX20_01382 -1.4 -0.9 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_03426 -1.4 -7.3 Phosphoribosylformylglycinamidine synthase compare
MPMX20_01185 -1.4 -3.2 hypothetical protein compare
MPMX20_04486 -1.4 -5.7 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MPMX20_04485 -1.4 -3.8 dTDP-fucosamine acetyltransferase compare
MPMX20_03642 -1.3 -5.8 Sulfite reductase [NADPH] hemoprotein beta-component compare
MPMX20_03154 -1.3 -4.4 Inner membrane protein YejM compare
MPMX20_00455 -1.3 -5.1 Modulator of FtsH protease HflK compare
MPMX20_04385 -1.3 -4.5 hypothetical protein compare
MPMX20_04518 -1.3 -0.9 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_04731 -1.3 -2.9 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_02102 -1.3 -1.3 hypothetical protein compare
MPMX20_04539 -1.3 -5.4 1,4-dihydroxy-2-naphthoate octaprenyltransferase compare
MPMX20_01064 -1.3 -6.4 Multidrug efflux pump subunit AcrB compare
MPMX20_04559 -1.3 -1.7 Superoxide dismutase [Mn] compare
MPMX20_03864 -1.3 -4.1 Sensor protein QseC compare
MPMX20_03412 -1.3 -2.8 HTH-type transcriptional regulator IscR compare
MPMX20_02917 -1.3 -1.8 hypothetical protein compare
MPMX20_02749 -1.3 -2.6 DNA polymerase III subunit theta compare
MPMX20_04387 -1.3 -2.7 hypothetical protein compare
MPMX20_03272 -1.3 -3.5 Intermembrane phospholipid transport system lipoprotein MlaA compare
MPMX20_02178 -1.3 -2.4 hypothetical protein compare
MPMX20_04598 -1.3 -4.3 Oxygen-independent coproporphyrinogen III oxidase compare
MPMX20_01788 -1.3 -3.8 Beta-hexosaminidase compare
MPMX20_04279 -1.3 -2.0 Shikimate kinase 1 compare
MPMX20_02176 -1.3 -2.7 hypothetical protein compare
MPMX20_00258 -1.3 -2.5 Diacylglycerol kinase compare
MPMX20_04685 -1.3 -3.1 hypothetical protein compare
MPMX20_00388 -1.3 -0.5 hypothetical protein compare
MPMX20_01273 -1.3 -3.2 Universal stress protein UP12 compare
MPMX20_03488 -1.3 -2.2 Persistence and stress-resistance antitoxin PasI compare
MPMX20_02591 -1.2 -2.5 DNA-binding protein H-NS compare


Specific Phenotypes

For 4 genes in this experiment

For mixed community TSB plate, 1:1 coculture with Bacillus_pumilus_TBS_103 in Enterobacter sp. TBS_079

For mixed community TSB plate, 1:1 coculture with Bacillus_pumilus_TBS_103 across organisms