Experiment set14S220 for Enterobacter sp. TBS_079

Compare to:

RCH2_defined_glucose plate, 1:1 coculture with Enterobacter_ludwigii_PH2

200 most important genes:

  gene name fitness t score description  
MPMX20_03771 -5.6 -3.9 D-3-phosphoglycerate dehydrogenase compare
MPMX20_03002 -5.1 -8.5 Histidinol dehydrogenase compare
MPMX20_00693 -4.8 -3.3 Phosphoserine phosphatase compare
MPMX20_00712 -4.8 -6.6 Threonine synthase compare
MPMX20_00556 -4.8 -6.5 Ornithine carbamoyltransferase subunit F compare
MPMX20_03812 -4.7 -5.6 dITP/XTP pyrophosphatase compare
MPMX20_03354 -4.7 -5.5 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_00711 -4.6 -9.8 Homoserine kinase compare
MPMX20_03003 -4.5 -5.4 Histidinol-phosphate aminotransferase compare
MPMX20_03007 -4.5 -4.4 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_04126 -4.5 -14.4 Glutamate synthase [NADPH] large chain compare
MPMX20_03681 -4.5 -11.2 Amino-acid acetyltransferase compare
MPMX20_00710 -4.5 -9.1 Bifunctional aspartokinase/homoserine dehydrogenase 1 compare
MPMX20_00928 -4.5 -10.4 Gamma-glutamyl phosphate reductase compare
MPMX20_02755 -4.4 -3.9 KHG/KDPG aldolase compare
MPMX20_03004 -4.4 -7.3 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_03005 -4.3 -5.1 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_04524 -4.3 -11.1 Phosphoenolpyruvate carboxylase compare
MPMX20_03468 -4.3 -5.9 T-protein compare
MPMX20_01551 -4.3 -4.2 Leucine-responsive regulatory protein compare
MPMX20_03008 -4.2 -5.7 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_04127 -4.2 -11.0 Glutamate synthase [NADPH] small chain compare
MPMX20_01570 -4.2 -1.7 Integration host factor subunit beta compare
MPMX20_04519 -4.2 -5.0 Hydrogen peroxide-inducible genes activator compare
MPMX20_04467 -4.2 -4.1 Diaminopimelate epimerase compare
MPMX20_00544 -4.2 -2.9 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_02344 -4.2 -1.3 hypothetical protein compare
MPMX20_03006 -4.1 -4.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_00927 -4.1 -12.4 Glutamate 5-kinase compare
MPMX20_00801 -4.1 -2.5 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_01370 -4.1 -2.9 Peptidoglycan-associated lipoprotein compare
MPMX20_00976 -4.1 -2.5 Pyrroline-5-carboxylate reductase compare
MPMX20_01354 -4.0 -1.8 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_00225 -4.0 -5.5 Phosphoribosylamine--glycine ligase compare
MPMX20_04497 -4.0 -8.0 HTH-type transcriptional regulator GltC compare
MPMX20_03426 -4.0 -7.7 Phosphoribosylformylglycinamidine synthase compare
MPMX20_03641 -4.0 -2.7 Phosphoadenosine phosphosulfate reductase compare
MPMX20_01566 -3.9 -6.0 Phosphoserine aminotransferase compare
MPMX20_04523 -3.9 -8.0 Acetylornithine deacetylase compare
MPMX20_00492 -3.9 -8.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX20_01369 -3.9 -4.6 Tol-Pal system protein TolB compare
MPMX20_01810 -3.9 -14.4 Virulence sensor histidine kinase PhoQ compare
MPMX20_00230 -3.8 -7.1 Homoserine O-succinyltransferase compare
MPMX20_03247 -3.8 -4.6 Amidophosphoribosyltransferase compare
MPMX20_04522 -3.8 -7.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_03001 -3.8 -9.9 ATP phosphoribosyltransferase compare
MPMX20_04077 -3.8 -8.9 Argininosuccinate synthase compare
MPMX20_03636 -3.8 -3.3 Adenylyl-sulfate kinase compare
MPMX20_00441 -3.8 -1.0 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_04498 -3.7 -8.7 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_03090 -3.7 -0.9 Methionine--tRNA ligase compare
MPMX20_04521 -3.7 -6.8 Acetylglutamate kinase compare
MPMX20_04520 -3.6 -7.3 Argininosuccinate lyase compare
MPMX20_04499 -3.6 -11.1 Dihydroxy-acid dehydratase compare
MPMX20_03571 -3.6 -1.1 tRNA-Arg compare
MPMX20_04531 -3.6 -8.3 Cystathionine gamma-synthase compare
MPMX20_01550 -3.5 -1.8 Thioredoxin reductase compare
MPMX20_02513 -3.5 -7.4 Tryptophan synthase beta chain compare
MPMX20_00740 -3.4 -4.1 Carbamoyl-phosphate synthase large chain compare
MPMX20_02494 -3.4 -2.4 Orotidine 5'-phosphate decarboxylase compare
MPMX20_03705 -3.4 -7.3 Diaminopimelate decarboxylase compare
MPMX20_02707 -3.4 -1.4 Septum site-determining protein MinC compare
MPMX20_01366 -3.3 -2.5 Tol-Pal system protein TolQ compare
MPMX20_03338 -3.3 -2.2 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_01349 -3.3 -5.3 Citrate synthase compare
MPMX20_04597 -3.3 -5.0 DNA-binding transcriptional regulator NtrC compare
MPMX20_03020 -3.3 -5.0 hypothetical protein compare
MPMX20_04162 -3.3 -2.3 3-dehydroquinate dehydratase compare
MPMX20_01097 -3.3 -3.9 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_03686 -3.3 -1.2 hypothetical protein compare
MPMX20_00241 -3.3 -5.5 Glucose-6-phosphate isomerase compare
MPMX20_01098 -3.3 -2.0 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_03390 -3.3 -6.5 Outer membrane protein assembly factor BamB compare
MPMX20_03153 -3.2 -1.0 hypothetical protein compare
MPMX20_04532 -3.2 -1.7 Met repressor compare
MPMX20_00452 -3.2 -4.9 tRNA dimethylallyltransferase compare
MPMX20_02510 -3.2 -10.1 Anthranilate synthase component 1 compare
MPMX20_02635 -3.2 -1.5 Release factor glutamine methyltransferase compare
MPMX20_01901 -3.1 -1.3 Integration host factor subunit alpha compare
MPMX20_03986 -3.1 -2.7 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_01734 -3.1 -4.3 Lipid A biosynthesis lauroyltransferase compare
MPMX20_00708 -3.1 -3.0 Aerobic respiration control protein ArcA compare
MPMX20_02514 -3.1 -3.3 Tryptophan synthase alpha chain compare
MPMX20_03642 -3.1 -10.2 Sulfite reductase [NADPH] hemoprotein beta-component compare
MPMX20_01367 -3.1 -3.0 Tol-Pal system protein TolR compare
MPMX20_02646 -3.0 -1.1 hypothetical protein compare
MPMX20_04552 -3.0 -4.1 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_03391 -3.0 -3.8 hypothetical protein compare
MPMX20_00226 -3.0 -2.1 Bifunctional purine biosynthesis protein PurH compare
MPMX20_00768 -3.0 -10.8 3-isopropylmalate dehydrogenase compare
MPMX20_04639 -3.0 -0.9 Phosphate-binding protein PstS compare
MPMX20_01368 -3.0 -3.7 hypothetical protein compare
MPMX20_03264 -3.0 -3.4 Chorismate synthase compare
MPMX20_04596 -3.0 -9.2 Sensory histidine kinase/phosphatase NtrB compare
MPMX20_01811 -3.0 -7.8 Transcriptional regulatory protein PhoP compare
MPMX20_01043 -3.0 -9.2 Ammonia channel compare
MPMX20_01567 -2.9 -2.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_04079 -2.9 -1.5 Protein-export membrane protein SecG compare
MPMX20_00785 -2.9 -2.5 D-alanine--D-alanine ligase B compare
MPMX20_03154 -2.9 -7.7 Inner membrane protein YejM compare
MPMX20_04374 -2.9 -1.4 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_04189 -2.9 -2.0 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_03811 -2.9 -2.1 hypothetical protein compare
MPMX20_00739 -2.9 -2.8 Carbamoyl-phosphate synthase small chain compare
MPMX20_02726 -2.9 -4.8 putative manganese efflux pump MntP compare
MPMX20_00764 -2.8 -1.2 hypothetical protein compare
MPMX20_04443 -2.8 -1.3 Sec-independent protein translocase protein TatB compare
MPMX20_00829 -2.8 -5.8 Poly(A) polymerase I compare
MPMX20_04670 -2.8 -1.7 hypothetical protein compare
MPMX20_02511 -2.8 -7.3 Bifunctional protein TrpGD compare
MPMX20_01355 -2.8 -0.5 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_00831 -2.8 -1.6 RNA polymerase-binding transcription factor DksA compare
MPMX20_01350 -2.8 -3.7 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_03408 -2.8 -1.3 Co-chaperone protein HscB compare
MPMX20_01607 -2.7 -3.1 Outer membrane protein A compare
MPMX20_01596 -2.7 -5.2 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_03756 -2.7 -2.5 FAD assembly factor SdhE compare
MPMX20_03469 -2.7 -8.0 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive compare
MPMX20_01969 -2.7 -1.8 Carbonic anhydrase 1 compare
MPMX20_02512 -2.7 -7.5 Tryptophan biosynthesis protein TrpCF compare
MPMX20_00109 -2.7 -13.4 hypothetical protein compare
MPMX20_04489 -2.7 -4.8 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_04262 -2.7 -5.2 Acetylornithine/succinyldiaminopimelate aminotransferase compare
MPMX20_03498 -2.6 -1.3 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_03852 -2.6 -10.2 Cystathionine beta-lyase MetC compare
MPMX20_04496 -2.6 -6.0 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_00767 -2.6 -7.0 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_03386 -2.6 -0.7 putative protein YfgJ compare
MPMX20_03753 -2.6 -3.1 Tyrosine recombinase XerD compare
MPMX20_02757 -2.6 -2.5 Glucose-6-phosphate 1-dehydrogenase compare
MPMX20_00720 -2.6 -0.8 Chaperone protein DnaK compare
MPMX20_02776 -2.6 -6.1 tRNA U34 carboxymethyltransferase compare
MPMX20_00110 -2.6 -8.1 hypothetical protein compare
MPMX20_04768 -2.6 -1.8 hypothetical protein compare
MPMX20_00105 -2.6 -10.2 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_04641 -2.5 -1.5 Phosphate transport system permease protein PstA compare
MPMX20_04529 -2.5 -5.9 5,10-methylenetetrahydrofolate reductase compare
MPMX20_03643 -2.4 -7.9 Sulfite reductase [NADPH] flavoprotein alpha-component compare
MPMX20_01586 -2.4 -6.3 Aspartate aminotransferase compare
MPMX20_04444 -2.4 -0.6 Sec-independent protein translocase protein TatA compare
MPMX20_04377 -2.4 -5.4 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_01295 -2.4 -3.1 Ribosomal RNA large subunit methyltransferase H compare
MPMX20_04340 -2.4 -3.7 Cell division ATP-binding protein FtsE compare
MPMX20_01984 -2.4 -1.0 Ribonuclease T compare
MPMX20_01320 -2.4 -9.7 Asparagine synthetase B [glutamine-hydrolyzing] compare
MPMX20_01334 -2.3 -5.8 Phosphoglucomutase compare
MPMX20_04111 -2.3 -2.5 RNase adapter protein RapZ compare
MPMX20_03706 -2.3 -5.9 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX20_04194 -2.3 -1.0 Peptide deformylase compare
MPMX20_00766 -2.3 -4.2 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_01021 -2.3 -3.1 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_01741 -2.3 -2.7 Dihydroorotase compare
MPMX20_01352 -2.3 -6.3 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_04279 -2.3 -2.1 Shikimate kinase 1 compare
MPMX20_01029 -2.3 -2.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_03407 -2.2 -1.5 Chaperone protein HscA compare
MPMX20_04275 -2.2 -1.2 Ribulose-phosphate 3-epimerase compare
MPMX20_03012 -2.2 -7.0 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_00453 -2.2 -0.9 RNA-binding protein Hfq compare
MPMX20_03638 -2.2 -7.7 Sulfate adenylyltransferase subunit 2 compare
MPMX20_00093 -2.2 -2.2 Orotate phosphoribosyltransferase compare
MPMX20_04110 -2.2 -3.9 Nitrogen regulatory protein compare
MPMX20_04557 -2.2 -4.4 Sensor histidine kinase CpxA compare
MPMX20_04442 -2.2 -2.6 Sec-independent protein translocase protein TatC compare
MPMX20_03013 -2.1 -4.4 dTDP-glucose 4,6-dehydratase compare
MPMX20_03490 -2.1 -2.8 SsrA-binding protein compare
MPMX20_02305 -2.1 -0.9 hypothetical protein compare
MPMX20_04278 -2.1 -1.5 3-dehydroquinate synthase compare
MPMX20_00108 -2.1 -9.2 hypothetical protein compare
MPMX20_01958 -2.1 -0.5 Fumarase D compare
MPMX20_03466 -2.1 -6.3 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_01353 -2.1 -3.9 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_00480 -2.1 -2.0 50S ribosomal protein L9 compare
MPMX20_03443 -2.1 -3.2 Anti-sigma-E factor RseA compare
MPMX20_02696 -2.1 -2.9 Murein tetrapeptide carboxypeptidase compare
MPMX20_02737 -2.1 -6.8 Tail-specific protease compare
MPMX20_02766 -2.1 -1.9 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_01386 -2.1 -6.3 UDP-glucose 4-epimerase compare
MPMX20_04482 -2.1 -5.8 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
MPMX20_03253 -2.1 -4.9 tRNA pseudouridine synthase A compare
MPMX20_04140 -2.1 -5.4 Malate dehydrogenase compare
MPMX20_03017 -2.0 -6.6 hypothetical protein compare
MPMX20_02769 -2.0 -1.0 putative transcriptional regulatory protein YebC compare
MPMX20_00540 -2.0 -7.6 Magnesium-transporting ATPase, P-type 1 compare
MPMX20_03226 -2.0 -3.1 Acetate kinase compare
MPMX20_01054 -2.0 -2.5 Transcriptional repressor RcnR compare
MPMX20_04298 -2.0 -1.7 hypothetical protein compare
MPMX20_01768 -2.0 -1.5 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_02282 -2.0 -4.2 Sensor histidine kinase RcsC compare
MPMX20_01729 -2.0 -11.6 Glucans biosynthesis protein G compare
MPMX20_03440 -2.0 -3.8 Elongation factor 4 compare
MPMX20_02767 -2.0 -1.9 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_01456 -2.0 -8.3 putative L,D-transpeptidase YbiS compare
MPMX20_04730 -2.0 -2.9 hypothetical protein compare
MPMX20_02393 -2.0 -0.7 hypothetical protein compare
MPMX20_04517 -1.9 -5.9 HTH-type transcriptional repressor FabR compare
MPMX20_00807 -1.9 -1.3 Pyruvate dehydrogenase E1 component compare
MPMX20_03580 -1.9 -4.8 Protein RecA compare
MPMX20_03932 -1.9 -2.2 hypothetical protein compare
MPMX20_01015 -1.9 -1.1 Protein/nucleic acid deglycase 3 compare


Specific Phenotypes

For 9 genes in this experiment

For mixed community RCH2_defined_glucose plate, 1:1 coculture with Enterobacter_ludwigii_PH2 in Enterobacter sp. TBS_079

For mixed community RCH2_defined_glucose plate, 1:1 coculture with Enterobacter_ludwigii_PH2 across organisms