Experiment set14S209 for Enterobacter sp. TBS_079

Compare to:

LB plate, 1:1 coculture with Pseudomonas_plecoglossicida_TBS_049

200 most important genes:

  gene name fitness t score description  
MPMX20_03986 -5.2 -2.6 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_04427 -4.2 -0.9 5S ribosomal RNA compare
MPMX20_01370 -4.2 -2.4 Peptidoglycan-associated lipoprotein compare
MPMX20_02912 -3.9 -0.8 hypothetical protein compare
MPMX20_01972 -3.9 -0.8 tRNA-Val compare
MPMX20_03390 -3.8 -5.1 Outer membrane protein assembly factor BamB compare
MPMX20_03723 -3.7 -3.0 Leucine-responsive regulatory protein compare
MPMX20_01368 -3.7 -2.4 hypothetical protein compare
MPMX20_01952 -3.7 -0.8 hypothetical protein compare
MPMX20_04194 -3.4 -1.0 Peptide deformylase compare
MPMX20_01570 -3.4 -1.6 Integration host factor subunit beta compare
MPMX20_02287 -3.4 -1.7 hypothetical protein compare
MPMX20_01958 -3.3 -0.7 Fumarase D compare
MPMX20_01354 -3.2 -1.6 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_02279 -3.2 -2.9 hypothetical protein compare
MPMX20_03090 -3.2 -0.9 Methionine--tRNA ligase compare
MPMX20_02913 -3.1 -1.1 hypothetical protein compare
MPMX20_01352 -3.1 -5.2 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_01369 -3.1 -3.7 Tol-Pal system protein TolB compare
MPMX20_01357 -3.1 -4.3 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_01366 -3.0 -1.9 Tol-Pal system protein TolQ compare
MPMX20_01697 -2.9 -2.5 Putative aminoacrylate peracid reductase RutC compare
MPMX20_02672 -2.9 -9.5 hypothetical protein compare
MPMX20_01350 -2.9 -3.3 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_04670 -2.8 -1.6 hypothetical protein compare
MPMX20_01367 -2.8 -1.9 Tol-Pal system protein TolR compare
MPMX20_01334 -2.8 -5.0 Phosphoglucomutase compare
MPMX20_03215 -2.8 -2.2 NADH-quinone oxidoreductase subunit E compare
MPMX20_02203 -2.8 -1.1 hypothetical protein compare
MPMX20_00728 -2.7 -0.8 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_00825 -2.7 -1.0 Aspartate 1-decarboxylase compare
MPMX20_00134 -2.7 -7.0 Mannitol-1-phosphate 5-dehydrogenase compare
MPMX20_01353 -2.7 -3.5 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_03211 -2.7 -3.2 NADH-quinone oxidoreductase subunit I compare
MPMX20_04482 -2.7 -8.0 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
MPMX20_01550 -2.7 -1.6 Thioredoxin reductase compare
MPMX20_03767 -2.7 -1.8 Xaa-Pro aminopeptidase compare
MPMX20_03443 -2.7 -4.2 Anti-sigma-E factor RseA compare
MPMX20_02086 -2.6 -3.7 hypothetical protein compare
MPMX20_04377 -2.6 -3.1 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_01156 -2.6 -2.7 hypothetical protein compare
MPMX20_03864 -2.6 -5.3 Sensor protein QseC compare
MPMX20_00419 -2.6 -7.8 Aspartate ammonia-lyase compare
MPMX20_00258 -2.6 -3.1 Diacylglycerol kinase compare
MPMX20_04140 -2.6 -3.5 Malate dehydrogenase compare
MPMX20_04253 -2.6 -0.7 Malonate decarboxylase acyl carrier protein compare
MPMX20_00108 -2.6 -11.4 hypothetical protein compare
MPMX20_03742 -2.5 -6.6 HTH-type transcriptional regulator GalR compare
MPMX20_03212 -2.5 -4.2 NADH-quinone oxidoreductase subunit H compare
MPMX20_03218 -2.5 -2.9 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_04110 -2.5 -2.9 Nitrogen regulatory protein compare
MPMX20_01356 -2.4 -8.0 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_04639 -2.4 -0.9 Phosphate-binding protein PstS compare
MPMX20_00998 -2.4 -2.4 Sec translocon accessory complex subunit YajC compare
MPMX20_02696 -2.4 -5.2 Murein tetrapeptide carboxypeptidase compare
MPMX20_03153 -2.4 -0.8 hypothetical protein compare
MPMX20_03209 -2.4 -1.6 NADH-quinone oxidoreductase subunit K compare
MPMX20_03509 -2.4 -0.7 hypothetical protein compare
MPMX20_02021 -2.4 -5.5 Fumarate hydratase class I, aerobic compare
MPMX20_00197 -2.4 -0.8 tRNA-Tyr compare
MPMX20_00105 -2.4 -8.8 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_04532 -2.4 -1.6 Met repressor compare
MPMX20_00722 -2.4 -5.6 Na(+)/H(+) antiporter NhaA compare
MPMX20_04374 -2.3 -1.3 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_00708 -2.3 -2.7 Aerobic respiration control protein ArcA compare
MPMX20_01355 -2.3 -0.5 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_00775 -2.3 -2.4 Ribosomal RNA small subunit methyltransferase H compare
MPMX20_00801 -2.3 -2.3 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_03020 -2.3 -4.1 hypothetical protein compare
MPMX20_01734 -2.2 -3.4 Lipid A biosynthesis lauroyltransferase compare
MPMX20_02646 -2.2 -0.9 hypothetical protein compare
MPMX20_04443 -2.2 -1.1 Sec-independent protein translocase protein TatB compare
MPMX20_00749 -2.2 -1.5 Chaperone SurA compare
MPMX20_02181 -2.2 -3.1 hypothetical protein compare
MPMX20_00262 -2.2 -2.4 Zinc uptake regulation protein compare
MPMX20_04552 -2.2 -4.2 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_02657 -2.2 -12.0 hypothetical protein compare
MPMX20_04444 -2.1 -0.6 Sec-independent protein translocase protein TatA compare
MPMX20_02934 -2.1 -2.9 Flagellar hook-basal body complex protein FliE compare
MPMX20_04003 -2.1 -3.6 Putative L-lactate dehydrogenase operon regulatory protein compare
MPMX20_03754 -2.1 -3.7 Flavodoxin 2 compare
MPMX20_03154 -2.1 -6.5 Inner membrane protein YejM compare
MPMX20_00650 -2.1 -3.0 hypothetical protein compare
MPMX20_04137 -2.1 -2.5 Inner membrane protein YhcB compare
MPMX20_04132 -2.1 -3.7 Stringent starvation protein B compare
MPMX20_00831 -2.1 -1.4 RNA polymerase-binding transcription factor DksA compare
MPMX20_04306 -2.1 -3.8 Glycerol-3-phosphate regulon repressor compare
MPMX20_03753 -2.1 -1.4 Tyrosine recombinase XerD compare
MPMX20_04319 -2.1 -6.0 HTH-type transcriptional regulator GntR compare
MPMX20_03210 -2.1 -3.9 NADH-quinone oxidoreductase subunit J compare
MPMX20_00643 -2.0 -3.0 HTH-type transcriptional regulator FarR compare
MPMX20_04647 -2.0 -3.7 hypothetical protein compare
MPMX20_00109 -2.0 -7.6 hypothetical protein compare
MPMX20_04730 -2.0 -3.0 hypothetical protein compare
MPMX20_04489 -2.0 -4.8 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_03253 -2.0 -4.2 tRNA pseudouridine synthase A compare
MPMX20_01017 -2.0 -2.5 hypothetical protein compare
MPMX20_01811 -2.0 -3.7 Transcriptional regulatory protein PhoP compare
MPMX20_04484 -1.9 -5.2 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MPMX20_04485 -1.9 -5.0 dTDP-fucosamine acetyltransferase compare
MPMX20_03012 -1.9 -3.5 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_03580 -1.9 -2.3 Protein RecA compare
MPMX20_04688 -1.9 -7.3 hypothetical protein compare
MPMX20_00435 -1.9 -2.5 Fumarate reductase subunit C compare
MPMX20_03408 -1.9 -1.1 Co-chaperone protein HscB compare
MPMX20_03095 -1.9 -1.2 hypothetical protein compare
MPMX20_03515 -1.9 -1.8 hypothetical protein compare
MPMX20_00181 -1.9 -6.5 HTH-type transcriptional regulator KdgR compare
MPMX20_00110 -1.9 -5.9 hypothetical protein compare
MPMX20_02635 -1.9 -1.4 Release factor glutamine methyltransferase compare
MPMX20_00455 -1.9 -6.4 Modulator of FtsH protease HflK compare
MPMX20_02767 -1.9 -1.8 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_00241 -1.9 -6.0 Glucose-6-phosphate isomerase compare
MPMX20_04442 -1.9 -1.3 Sec-independent protein translocase protein TatC compare
MPMX20_01031 -1.9 -0.9 DNA-binding protein HU-beta compare
MPMX20_02295 -1.8 -0.7 hypothetical protein compare
MPMX20_00480 -1.8 -1.7 50S ribosomal protein L9 compare
MPMX20_02476 -1.8 -1.1 Putrescine export system permease protein SapC compare
MPMX20_03675 -1.8 -3.6 tRNA threonylcarbamoyladenosine dehydratase compare
MPMX20_00611 -1.8 -2.2 hypothetical protein compare
MPMX20_03440 -1.8 -2.2 Elongation factor 4 compare
MPMX20_03498 -1.8 -1.0 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_00540 -1.8 -7.6 Magnesium-transporting ATPase, P-type 1 compare
MPMX20_04480 -1.8 -5.5 UDP-N-acetyl-D-mannosaminuronic acid transferase compare
MPMX20_03206 -1.8 -6.1 NADH-quinone oxidoreductase subunit N compare
MPMX20_04385 -1.8 -5.4 hypothetical protein compare
MPMX20_03409 -1.8 -1.0 Iron-binding protein IscA compare
MPMX20_03385 -1.8 -1.9 hypothetical protein compare
MPMX20_03998 -1.8 -6.2 Putative membrane-bound redox modulator Alx compare
MPMX20_01488 -1.8 -1.1 hypothetical protein compare
MPMX20_00441 -1.8 -1.0 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_04346 -1.8 -5.9 Zinc/cadmium/lead-transporting P-type ATPase compare
MPMX20_04375 -1.8 -1.7 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_03264 -1.8 -2.7 Chorismate synthase compare
MPMX20_01969 -1.8 -1.2 Carbonic anhydrase 1 compare
MPMX20_03746 -1.8 -2.6 tRNA-Gly compare
MPMX20_04768 -1.8 -1.2 hypothetical protein compare
MPMX20_04104 -1.7 -3.1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC compare
MPMX20_03017 -1.7 -5.4 hypothetical protein compare
MPMX20_03973 -1.7 -3.0 Protein TraR compare
MPMX20_03805 -1.7 -7.5 Glutathione synthetase compare
MPMX20_04200 -1.7 -3.3 HTH-type transcriptional regulator ZntR compare
MPMX20_01351 -1.7 -2.4 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_00693 -1.7 -4.7 Phosphoserine phosphatase compare
MPMX20_03571 -1.7 -1.0 tRNA-Arg compare
MPMX20_01073 -1.7 -1.5 Nucleoid-associated protein YbaB compare
MPMX20_02477 -1.7 -2.0 Peptide transport system ATP-binding protein SapD compare
MPMX20_01333 -1.7 -3.2 Negative modulator of initiation of replication compare
MPMX20_03128 -1.7 -4.6 HTH-type transcriptional activator CmpR compare
MPMX20_03463 -1.7 -3.8 Ribosomal large subunit pseudouridine synthase D compare
MPMX20_01695 -1.7 -2.5 putative malonic semialdehyde reductase RutE compare
MPMX20_02707 -1.7 -1.3 Septum site-determining protein MinC compare
MPMX20_00456 -1.7 -3.8 Modulator of FtsH protease HflC compare
MPMX20_02585 -1.7 -4.9 Oligopeptide transport system permease protein OppC compare
MPMX20_01749 -1.6 -4.1 Flagella synthesis protein FlgN compare
MPMX20_04469 -1.6 -1.1 Adenylate cyclase compare
MPMX20_01386 -1.6 -4.2 UDP-glucose 4-epimerase compare
MPMX20_01029 -1.6 -1.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_04393 -1.6 -1.6 Low-affinity inorganic phosphate transporter 1 compare
MPMX20_02668 -1.6 -2.3 hypothetical protein compare
MPMX20_01030 -1.6 -4.6 Lon protease compare
MPMX20_02591 -1.6 -2.2 DNA-binding protein H-NS compare
MPMX20_01837 -1.6 -1.5 hypothetical protein compare
MPMX20_04501 -1.6 -2.7 Acetolactate synthase isozyme 2 small subunit compare
MPMX20_01869 -1.6 -6.0 Succinylglutamate desuccinylase compare
MPMX20_03396 -1.6 -2.9 Nucleoside diphosphate kinase compare
MPMX20_04640 -1.6 -0.8 Phosphate transport system permease protein PstC compare
MPMX20_00136 -1.6 -0.3 hypothetical protein compare
MPMX20_00747 -1.6 -1.5 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_01775 -1.6 -2.9 3-oxoacyl-[acyl-carrier-protein] synthase 2 compare
MPMX20_02643 -1.6 -4.0 hypothetical protein compare
MPMX20_02757 -1.6 -1.8 Glucose-6-phosphate 1-dehydrogenase compare
MPMX20_04517 -1.6 -4.4 HTH-type transcriptional repressor FabR compare
MPMX20_04519 -1.5 -2.8 Hydrogen peroxide-inducible genes activator compare
MPMX20_03447 -1.5 -4.4 ATP-dependent RNA helicase SrmB compare
MPMX20_03217 -1.5 -3.1 NADH-quinone oxidoreductase subunit B compare
MPMX20_02883 -1.5 -3.8 hypothetical protein compare
MPMX20_01331 -1.5 -2.3 putative protein YbfE compare
MPMX20_01491 -1.5 -4.3 Glutaredoxin 1 compare
MPMX20_02145 -1.5 -3.9 Putative 1,2-phenylacetyl-CoA epoxidase, subunit D compare
MPMX20_04254 -1.5 -3.6 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase compare
MPMX20_01866 -1.5 -1.8 Arginine N-succinyltransferase compare
MPMX20_04399 -1.5 -4.2 Glutathione reductase compare
MPMX20_02471 -1.5 -1.9 Phage shock protein B compare
MPMX20_03122 -1.5 -3.1 hypothetical protein compare
MPMX20_03013 -1.5 -1.0 dTDP-glucose 4,6-dehydratase compare
MPMX20_01394 -1.5 -5.0 6-phosphogluconolactonase compare
MPMX20_02363 -1.5 -3.4 Peroxiredoxin OsmC compare
MPMX20_03216 -1.5 -6.3 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_01349 -1.5 -3.2 Citrate synthase compare
MPMX20_01023 -1.5 -6.0 Cytochrome bo(3) ubiquinol oxidase subunit 2 compare
MPMX20_01021 -1.5 -2.1 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_01984 -1.5 -0.7 Ribonuclease T compare
MPMX20_03202 -1.5 -1.3 Protein ElaB compare
MPMX20_03422 -1.5 -1.5 Nitrogen regulatory protein P-II compare
MPMX20_01788 -1.5 -2.9 Beta-hexosaminidase compare
MPMX20_04079 -1.5 -1.1 Protein-export membrane protein SecG compare
MPMX20_04466 -1.4 -1.8 hypothetical protein compare
MPMX20_04105 -1.4 -1.4 Lipopolysaccharide export system protein LptC compare
MPMX20_04366 -1.4 -1.8 Outer-membrane lipoprotein carrier protein compare


Specific Phenotypes

For 2 genes in this experiment

For mixed community LB plate, 1:1 coculture with Pseudomonas_plecoglossicida_TBS_049 in Enterobacter sp. TBS_079

For mixed community LB plate, 1:1 coculture with Pseudomonas_plecoglossicida_TBS_049 across organisms