Experiment set14S209 for Enterobacter sp. TBS_079

Compare to:

LB plate, 1:1 coculture with Pseudomonas_plecoglossicida_TBS_049

200 most detrimental genes:

  gene name fitness t score description  
MPMX20_00793 +5.1 2.2 DNA gyrase inhibitor YacG compare
MPMX20_01005 +4.4 1.8 Transcriptional repressor NrdR compare
MPMX20_00388 +4.0 4.3 hypothetical protein compare
MPMX20_01389 +3.2 1.7 Multidrug efflux pump accessory protein AcrZ compare
MPMX20_00223 +2.9 2.9 DNA-binding protein HU-alpha compare
MPMX20_04245 +2.8 2.4 General stress protein 14 compare
MPMX20_02393 +2.3 1.4 hypothetical protein compare
MPMX20_04040 +2.3 2.3 PTS system fructose-specific EIIB component compare
MPMX20_00929 +2.2 2.8 tRNA-Thr compare
MPMX20_04595 +2.1 1.1 Glutamine synthetase compare
MPMX20_03382 +2.0 1.3 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_03054 +2.0 2.4 hypothetical protein compare
MPMX20_03147 +1.9 1.0 putative protein YejG compare
MPMX20_02597 +1.9 3.0 tRNA-Tyr compare
MPMX20_03320 +1.8 1.8 Inner membrane protein YfeZ compare
MPMX20_03240 +1.7 2.8 hypothetical protein compare
MPMX20_02738 +1.7 2.6 RNA chaperone ProQ compare
MPMX20_01044 +1.7 3.5 Acyl-CoA thioesterase 2 compare
MPMX20_03303 +1.7 2.4 hypothetical protein compare
MPMX20_03724 +1.6 1.9 Homoserine/homoserine lactone efflux protein compare
MPMX20_01478 +1.6 3.4 Deoxyribose operon repressor compare
MPMX20_04201 +1.5 2.2 hypothetical protein compare
MPMX20_01919 +1.5 2.3 putative protein YdiE compare
MPMX20_02439 +1.5 1.4 hypothetical protein compare
MPMX20_04543 +1.5 7.0 Glycerol kinase compare
MPMX20_03092 +1.5 2.7 Transcriptional regulatory protein BtsR compare
MPMX20_02704 +1.5 1.5 hypothetical protein compare
MPMX20_03655 +1.4 8.9 Signal transduction histidine-protein kinase BarA compare
MPMX20_04285 +1.4 1.9 ADP compounds hydrolase NudE compare
MPMX20_04122 +1.4 2.1 Aldehyde reductase Ahr compare
MPMX20_04119 +1.4 0.7 DNA polymerase III subunit chi compare
MPMX20_00494 +1.4 1.9 hypothetical protein compare
MPMX20_00055 +1.4 1.9 hypothetical protein compare
MPMX20_04043 +1.4 1.4 hypothetical protein compare
MPMX20_03590 +1.3 1.1 hypothetical protein compare
MPMX20_03966 +1.3 2.2 hypothetical protein compare
MPMX20_04167 +1.3 2.9 Ribosomal protein L11 methyltransferase compare
MPMX20_04344 +1.3 1.3 hypothetical protein compare
MPMX20_03043 +1.3 2.1 Low molecular weight protein-tyrosine-phosphatase Wzb compare
MPMX20_01752 +1.3 1.7 Flagellar basal body rod protein FlgB compare
MPMX20_03925 +1.3 1.9 hypothetical protein compare
MPMX20_04298 +1.3 1.2 hypothetical protein compare
MPMX20_03076 +1.3 1.8 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
MPMX20_01286 +1.3 1.0 Sec-independent protein translocase protein TatE compare
MPMX20_00225 +1.3 6.0 Phosphoribosylamine--glycine ligase compare
MPMX20_01220 +1.3 1.7 hypothetical protein compare
MPMX20_04588 +1.2 2.7 Sulfofructosephosphate aldolase compare
MPMX20_00209 +1.2 2.6 PTS system N,N'-diacetylchitobiose-specific EIIA component compare
MPMX20_01434 +1.2 1.0 putative protein YbiI compare
MPMX20_00720 +1.2 1.1 Chaperone protein DnaK compare
MPMX20_03686 +1.2 0.7 hypothetical protein compare
MPMX20_03285 +1.2 0.8 hypothetical protein compare
MPMX20_03304 +1.2 3.1 hypothetical protein compare
MPMX20_03704 +1.2 3.5 HTH-type transcriptional regulator AscG compare
MPMX20_02685 +1.2 2.8 hypothetical protein compare
MPMX20_02559 +1.2 2.0 hypothetical protein compare
MPMX20_02255 +1.2 2.3 Metal-binding protein ZinT compare
MPMX20_02375 +1.1 1.7 Polyphosphate:ADP phosphotransferase 3 compare
MPMX20_04153 +1.1 2.5 Ribonuclease G compare
MPMX20_01068 +1.1 0.8 hypothetical protein compare
MPMX20_01860 +1.1 1.5 Thiamine import ATP-binding protein ThiQ compare
MPMX20_03343 +1.1 2.4 Putative transport protein YhhT compare
MPMX20_04535 +1.1 4.1 HTH-type transcriptional repressor CytR compare
MPMX20_01951 +1.1 1.6 Pyruvate kinase I compare
MPMX20_01818 +1.1 2.4 Phosphatase NudJ compare
MPMX20_00093 +1.1 3.4 Orotate phosphoribosyltransferase compare
MPMX20_04760 +1.1 3.1 IS3 family transposase ISRaq1 compare
MPMX20_00545 +1.1 2.5 Arginine repressor compare
MPMX20_03416 +1.1 2.0 hypothetical protein compare
MPMX20_03348 +1.1 2.0 N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase compare
MPMX20_01691 +1.1 1.1 hypothetical protein compare
MPMX20_02034 +1.1 2.5 hypothetical protein compare
MPMX20_02150 +1.0 2.4 Acyl-coenzyme A thioesterase PaaI compare
MPMX20_01785 +1.0 1.3 hypothetical protein compare
MPMX20_01380 +1.0 1.0 hypothetical protein compare
MPMX20_01551 +1.0 3.6 Leucine-responsive regulatory protein compare
MPMX20_02943 +1.0 1.3 Flagellar motor switch protein FliN compare
MPMX20_00266 +1.0 2.2 Phage shock protein G compare
MPMX20_01911 +1.0 1.8 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B compare
MPMX20_01928 +1.0 2.1 hypothetical protein compare
MPMX20_03177 +1.0 2.4 Transcriptional regulatory protein RcsB compare
MPMX20_01613 +1.0 1.7 Methylglyoxal synthase compare
MPMX20_01871 +1.0 2.9 Periplasmic chaperone Spy compare
MPMX20_03779 +1.0 1.0 D-erythrose-4-phosphate dehydrogenase compare
MPMX20_02321 +1.0 2.5 Nodulation protein D 2 compare
MPMX20_00653 +1.0 1.6 Organic hydroperoxide resistance protein OhrB compare
MPMX20_03318 +1.0 1.0 Dye-decolorizing peroxidase YfeX compare
MPMX20_01625 +1.0 1.9 tRNA-Ser compare
MPMX20_04292 +1.0 3.2 Transcriptional regulatory protein OmpR compare
MPMX20_04283 +1.0 3.1 hypothetical protein compare
MPMX20_03451 +1.0 2.2 Thioredoxin 2 compare
MPMX20_03426 +1.0 5.5 Phosphoribosylformylglycinamidine synthase compare
MPMX20_04561 +1.0 2.3 HTH-type transcriptional activator RhaR compare
MPMX20_03239 +1.0 2.7 Epimerase family protein compare
MPMX20_04587 +1.0 1.6 3-sulfolactaldehyde reductase compare
MPMX20_01069 +1.0 2.1 Primosomal replication protein N'' compare
MPMX20_02826 +1.0 0.7 Cold shock-like protein CspB compare
MPMX20_03247 +1.0 2.8 Amidophosphoribosyltransferase compare
MPMX20_04546 +1.0 1.5 hypothetical protein compare
MPMX20_01016 +1.0 2.9 2-dehydropantoate 2-reductase compare
MPMX20_00038 +1.0 1.5 hypothetical protein compare
MPMX20_01651 +1.0 2.4 hypothetical protein compare
MPMX20_03741 +1.0 2.9 Fructokinase compare
MPMX20_01595 +1.0 1.3 FMN reductase (NADPH) compare
MPMX20_04363 +1.0 1.7 hypothetical protein compare
MPMX20_01872 +1.0 1.4 Protein Ves compare
MPMX20_03518 +0.9 2.0 Protein YceI compare
MPMX20_03221 +0.9 3.4 5'-deoxynucleotidase YfbR compare
MPMX20_02673 +0.9 3.6 hypothetical protein compare
MPMX20_02903 +0.9 0.6 hypothetical protein compare
MPMX20_02102 +0.9 1.0 hypothetical protein compare
MPMX20_04066 +0.9 1.0 ATP-dependent RNA helicase DeaD compare
MPMX20_01615 +0.9 1.3 putative protein YccU compare
MPMX20_02164 +0.9 2.0 HTH-type transcriptional regulator ZntR compare
MPMX20_04696 +0.9 2.4 hypothetical protein compare
MPMX20_02998 +0.9 1.5 Low-affinity putrescine importer PlaP compare
MPMX20_01699 +0.9 3.8 Pyrimidine monooxygenase RutA compare
MPMX20_04045 +0.9 2.3 Putative D-galactosamine-6-phosphate deaminase AgaS compare
MPMX20_01003 +0.9 2.5 Nucleoside-specific channel-forming protein Tsx compare
MPMX20_03653 +0.9 4.1 GTP pyrophosphokinase compare
MPMX20_03881 +0.9 1.5 ADP-ribose pyrophosphatase compare
MPMX20_04657 +0.9 2.7 hypothetical protein compare
MPMX20_00827 +0.9 1.7 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
MPMX20_00873 +0.9 1.0 Protein rof compare
MPMX20_02049 +0.9 3.5 Arylamine N-acetyltransferase compare
MPMX20_01439 +0.9 3.0 Glutamine transport system permease protein GlnP compare
MPMX20_01665 +0.9 0.8 hypothetical protein compare
MPMX20_04542 +0.9 3.5 Glycerol uptake facilitator protein compare
MPMX20_02572 +0.9 2.7 hypothetical protein compare
MPMX20_00811 +0.9 1.2 hypothetical protein compare
MPMX20_04262 +0.9 1.5 Acetylornithine/succinyldiaminopimelate aminotransferase compare
MPMX20_00821 +0.9 2.8 putative ABC transporter ATP-binding protein YadG compare
MPMX20_01310 +0.9 1.6 PhoH-like protein compare
MPMX20_02731 +0.9 1.7 hypothetical protein compare
MPMX20_01053 +0.9 2.6 Nickel/cobalt efflux system RcnA compare
MPMX20_04270 +0.9 2.0 Nitrite reductase (NADH) small subunit compare
MPMX20_04369 +0.9 1.9 3-oxoacyl-[acyl-carrier-protein] synthase 2 compare
MPMX20_04340 +0.9 1.4 Cell division ATP-binding protein FtsE compare
MPMX20_00844 +0.9 2.8 Vitamin B12-binding protein compare
MPMX20_03879 +0.9 2.7 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA compare
MPMX20_03774 +0.9 1.8 26 kDa periplasmic immunogenic protein compare
MPMX20_03278 +0.9 0.8 hypothetical protein compare
MPMX20_01378 +0.8 1.4 Nicotinamide riboside transporter PnuC compare
MPMX20_00764 +0.8 0.7 hypothetical protein compare
MPMX20_03040 +0.8 2.5 Serine acetyltransferase compare
MPMX20_03110 +0.8 3.3 Cryptic beta-glucoside bgl operon antiterminator compare
MPMX20_03667 +0.8 2.2 L-serine dehydratase 2 compare
MPMX20_01740 +0.8 1.7 DNA damage-inducible protein I compare
MPMX20_01465 +0.8 1.8 Fructose-6-phosphate aldolase 1 compare
MPMX20_00542 +0.8 1.6 2-iminobutanoate/2-iminopropanoate deaminase compare
MPMX20_01596 +0.8 5.9 Dihydroorotate dehydrogenase (quinone) compare
MPMX20_02118 +0.8 2.4 hypothetical protein compare
MPMX20_00009 +0.8 2.8 putative 2-dehydro-3-deoxygalactonokinase DgoK1 compare
MPMX20_03902 +0.8 0.8 Urease accessory protein UreE compare
MPMX20_02351 +0.8 2.8 Fructokinase compare
MPMX20_03916 +0.8 2.6 hypothetical protein compare
MPMX20_01991 +0.8 2.2 Superoxide dismutase [Cu-Zn] compare
MPMX20_04567 +0.8 2.3 Melibiose permease compare
MPMX20_00871 +0.8 1.6 hypothetical protein compare
MPMX20_03569 +0.8 2.2 Inner membrane protein YqaA compare
MPMX20_00735 +0.8 0.9 hypothetical protein compare
MPMX20_03302 +0.8 1.4 HTH-type transcriptional regulator CynR compare
MPMX20_03433 +0.8 1.3 Ferredoxin YfhL compare
MPMX20_04584 +0.8 1.5 Alpha-D-glucose 1-phosphate phosphatase YihX compare
MPMX20_02465 +0.8 2.7 Inner membrane ABC transporter permease protein YcjP compare
MPMX20_00740 +0.8 2.0 Carbamoyl-phosphate synthase large chain compare
MPMX20_02924 +0.8 2.8 hypothetical protein compare
MPMX20_03740 +0.8 1.3 PTS system N,N'-diacetylchitobiose-specific EIIA component compare
MPMX20_02822 +0.8 2.0 hypothetical protein compare
MPMX20_00874 +0.8 1.1 hypothetical protein compare
MPMX20_03170 +0.8 3.2 Magnesium transporter MgtE compare
MPMX20_03992 +0.8 1.0 Transcriptional regulator LsrR compare
MPMX20_03148 +0.8 2.3 Bicyclomycin resistance protein compare
MPMX20_02839 +0.8 3.8 Response regulator UvrY compare
MPMX20_03354 +0.8 2.7 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_01218 +0.8 2.0 hypothetical protein compare
MPMX20_03301 +0.8 1.1 hypothetical protein compare
MPMX20_02750 +0.8 2.5 hypothetical protein compare
MPMX20_03248 +0.8 1.0 Colicin V production protein compare
MPMX20_02431 +0.8 1.9 hypothetical protein compare
MPMX20_00459 +0.8 2.8 HTH-type transcriptional repressor NsrR compare
MPMX20_02665 +0.7 2.6 hypothetical protein compare
MPMX20_00699 +0.7 2.2 Soluble lytic murein transglycosylase compare
MPMX20_02132 +0.7 2.3 D-lactate dehydrogenase compare
MPMX20_02355 +0.7 0.9 D-alanyl-D-alanine dipeptidase compare
MPMX20_04673 +0.7 3.0 hypothetical protein compare
MPMX20_04408 +0.7 1.7 Inner membrane metabolite transport protein YhjE compare
MPMX20_00012 +0.7 2.3 D-galactonate transporter compare
MPMX20_02052 +0.7 2.8 hypothetical protein compare
MPMX20_00463 +0.7 2.2 Putative acyl-CoA dehydrogenase AidB compare
MPMX20_01532 +0.7 2.6 Pyruvate dehydrogenase [ubiquinone] compare
MPMX20_00897 +0.7 1.4 Hydroxyacylglutathione hydrolase GloB compare
MPMX20_03954 +0.7 2.4 hypothetical protein compare
MPMX20_01603 +0.7 1.5 Intermembrane transport lipoprotein PqiC compare
MPMX20_01413 +0.7 1.5 Molybdopterin synthase sulfur carrier subunit compare
MPMX20_03951 +0.7 1.0 hypothetical protein compare
MPMX20_03815 +0.7 1.3 hypothetical protein compare
MPMX20_01470 +0.7 3.3 Glutathione-binding protein GsiB compare
MPMX20_02092 +0.7 2.5 D-galactonate dehydratase family member compare
MPMX20_04405 +0.7 2.2 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare


Specific Phenotypes

For 2 genes in this experiment

For mixed community LB plate, 1:1 coculture with Pseudomonas_plecoglossicida_TBS_049 in Enterobacter sp. TBS_079

For mixed community LB plate, 1:1 coculture with Pseudomonas_plecoglossicida_TBS_049 across organisms