Experiment set14S201 for Enterobacter sp. TBS_079

Compare to:

TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2

200 most important genes:

  gene name fitness t score description  
MPMX20_04692 -5.5 -1.3 hypothetical protein compare
MPMX20_03986 -5.4 -3.1 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_03479 -4.8 -1.9 30S ribosomal protein S16 compare
MPMX20_01691 -4.4 -1.8 hypothetical protein compare
MPMX20_03678 -4.3 -1.0 tRNA-Met compare
MPMX20_04519 -4.1 -2.9 Hydrogen peroxide-inducible genes activator compare
MPMX20_01368 -4.0 -2.7 hypothetical protein compare
MPMX20_01370 -3.7 -3.3 Peptidoglycan-associated lipoprotein compare
MPMX20_04670 -3.7 -1.7 hypothetical protein compare
MPMX20_01570 -3.6 -1.9 Integration host factor subunit beta compare
MPMX20_00764 -3.6 -1.4 hypothetical protein compare
MPMX20_02344 -3.6 -1.4 hypothetical protein compare
MPMX20_04194 -3.4 -1.1 Peptide deformylase compare
MPMX20_01811 -3.3 -9.4 Transcriptional regulatory protein PhoP compare
MPMX20_04297 -3.2 -2.5 putative [Fe-S]-dependent transcriptional repressor FeoC compare
MPMX20_01351 -3.2 -1.8 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_03095 -3.1 -1.7 hypothetical protein compare
MPMX20_01366 -3.1 -3.0 Tol-Pal system protein TolQ compare
MPMX20_00708 -3.0 -2.1 Aerobic respiration control protein ArcA compare
MPMX20_01369 -3.0 -5.3 Tol-Pal system protein TolB compare
MPMX20_01367 -3.0 -2.9 Tol-Pal system protein TolR compare
MPMX20_04552 -3.0 -3.5 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_04546 -2.8 -2.0 hypothetical protein compare
MPMX20_04141 -2.8 -5.3 Arginine repressor compare
MPMX20_00266 -2.7 -1.9 Phage shock protein G compare
MPMX20_04639 -2.6 -1.0 Phosphate-binding protein PstS compare
MPMX20_01354 -2.6 -2.0 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_04253 -2.6 -0.8 Malonate decarboxylase acyl carrier protein compare
MPMX20_01073 -2.5 -1.9 Nucleoid-associated protein YbaB compare
MPMX20_01901 -2.5 -1.3 Integration host factor subunit alpha compare
MPMX20_04346 -2.5 -9.8 Zinc/cadmium/lead-transporting P-type ATPase compare
MPMX20_04374 -2.5 -1.5 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_01056 -2.5 -2.6 50S ribosomal protein L31 type B compare
MPMX20_01334 -2.5 -7.0 Phosphoglucomutase compare
MPMX20_02881 -2.4 -1.8 hypothetical protein compare
MPMX20_00480 -2.4 -2.4 50S ribosomal protein L9 compare
MPMX20_01355 -2.4 -0.5 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_01357 -2.4 -4.3 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_00105 -2.4 -9.4 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_02121 -2.4 -2.4 hypothetical protein compare
MPMX20_02576 -2.4 -1.6 Protein TonB compare
MPMX20_00258 -2.3 -3.9 Diacylglycerol kinase compare
MPMX20_02672 -2.3 -13.2 hypothetical protein compare
MPMX20_02946 -2.3 -2.0 Flagellar biosynthetic protein FliQ compare
MPMX20_04385 -2.3 -5.5 hypothetical protein compare
MPMX20_04504 -2.3 -2.3 hypothetical protein compare
MPMX20_03864 -2.3 -5.7 Sensor protein QseC compare
MPMX20_00831 -2.3 -1.6 RNA polymerase-binding transcription factor DksA compare
MPMX20_03641 -2.2 -5.4 Phosphoadenosine phosphosulfate reductase compare
MPMX20_04140 -2.2 -4.7 Malate dehydrogenase compare
MPMX20_02668 -2.2 -2.8 hypothetical protein compare
MPMX20_04444 -2.2 -0.7 Sec-independent protein translocase protein TatA compare
MPMX20_01810 -2.2 -7.6 Virulence sensor histidine kinase PhoQ compare
MPMX20_03390 -2.2 -6.0 Outer membrane protein assembly factor BamB compare
MPMX20_00441 -2.1 -1.2 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_04641 -2.1 -1.5 Phosphate transport system permease protein PstA compare
MPMX20_00720 -2.1 -0.8 Chaperone protein DnaK compare
MPMX20_01286 -2.1 -0.8 Sec-independent protein translocase protein TatE compare
MPMX20_04557 -2.1 -6.0 Sensor histidine kinase CpxA compare
MPMX20_04685 -2.1 -5.7 hypothetical protein compare
MPMX20_00262 -2.1 -2.8 Zinc uptake regulation protein compare
MPMX20_00110 -2.1 -5.9 hypothetical protein compare
MPMX20_00109 -2.1 -7.7 hypothetical protein compare
MPMX20_03409 -2.1 -1.2 Iron-binding protein IscA compare
MPMX20_01969 -2.0 -1.4 Carbonic anhydrase 1 compare
MPMX20_00108 -2.0 -11.5 hypothetical protein compare
MPMX20_00728 -2.0 -0.9 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_04489 -2.0 -6.0 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_02635 -2.0 -1.6 Release factor glutamine methyltransferase compare
MPMX20_00452 -2.0 -5.3 tRNA dimethylallyltransferase compare
MPMX20_04768 -1.9 -1.3 hypothetical protein compare
MPMX20_00825 -1.9 -1.0 Aspartate 1-decarboxylase compare
MPMX20_03753 -1.9 -2.6 Tyrosine recombinase XerD compare
MPMX20_03998 -1.9 -7.8 Putative membrane-bound redox modulator Alx compare
MPMX20_01333 -1.9 -3.0 Negative modulator of initiation of replication compare
MPMX20_04442 -1.9 -1.8 Sec-independent protein translocase protein TatC compare
MPMX20_03490 -1.9 -2.2 SsrA-binding protein compare
MPMX20_03463 -1.9 -4.2 Ribosomal large subunit pseudouridine synthase D compare
MPMX20_04301 -1.9 -2.4 Fe/S biogenesis protein NfuA compare
MPMX20_03686 -1.9 -1.4 hypothetical protein compare
MPMX20_03012 -1.9 -4.5 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_04484 -1.8 -5.3 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MPMX20_03391 -1.8 -2.7 hypothetical protein compare
MPMX20_04377 -1.8 -5.0 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_00435 -1.8 -3.7 Fumarate reductase subunit C compare
MPMX20_00693 -1.8 -5.2 Phosphoserine phosphatase compare
MPMX20_04104 -1.8 -3.0 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC compare
MPMX20_03226 -1.8 -1.8 Acetate kinase compare
MPMX20_00801 -1.8 -1.8 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_01984 -1.8 -1.0 Ribonuclease T compare
MPMX20_03767 -1.7 -3.5 Xaa-Pro aminopeptidase compare
MPMX20_04085 -1.7 -3.1 Transcription elongation factor GreA compare
MPMX20_04558 -1.7 -1.7 Protein YiiM compare
MPMX20_04278 -1.7 -1.2 3-dehydroquinate synthase compare
MPMX20_03013 -1.7 -1.7 dTDP-glucose 4,6-dehydratase compare
MPMX20_02776 -1.7 -4.3 tRNA U34 carboxymethyltransferase compare
MPMX20_00022 -1.7 -2.6 Inner membrane protein YidG compare
MPMX20_01030 -1.7 -4.8 Lon protease compare
MPMX20_02597 -1.7 -2.5 tRNA-Tyr compare
MPMX20_02645 -1.7 -3.3 Ribosome-binding ATPase YchF compare
MPMX20_01972 -1.7 -0.7 tRNA-Val compare
MPMX20_03440 -1.6 -2.9 Elongation factor 4 compare
MPMX20_02102 -1.6 -1.3 hypothetical protein compare
MPMX20_00241 -1.6 -5.7 Glucose-6-phosphate isomerase compare
MPMX20_00700 -1.6 -2.4 Trp operon repressor compare
MPMX20_03487 -1.6 -3.8 Outer membrane protein assembly factor BamE compare
MPMX20_00226 -1.6 -4.0 Bifunctional purine biosynthesis protein PurH compare
MPMX20_01353 -1.6 -2.6 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_04279 -1.6 -2.2 Shikimate kinase 1 compare
MPMX20_03014 -1.5 -6.8 6-phosphogluconate dehydrogenase, decarboxylating compare
MPMX20_04110 -1.5 -2.7 Nitrogen regulatory protein compare
MPMX20_01029 -1.5 -2.1 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_02903 -1.5 -1.6 hypothetical protein compare
MPMX20_02305 -1.5 -0.8 hypothetical protein compare
MPMX20_04730 -1.5 -2.0 hypothetical protein compare
MPMX20_04375 -1.5 -2.8 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_02757 -1.5 -2.2 Glucose-6-phosphate 1-dehydrogenase compare
MPMX20_02011 -1.5 -5.3 Ion-translocating oxidoreductase complex subunit A compare
MPMX20_03253 -1.5 -4.4 tRNA pseudouridine synthase A compare
MPMX20_00920 -1.5 -2.9 hypothetical protein compare
MPMX20_04339 -1.5 -4.5 Cell division protein FtsX compare
MPMX20_04189 -1.4 -3.2 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_01303 -1.4 -2.1 Glutamine transport ATP-binding protein GlnQ compare
MPMX20_03020 -1.4 -3.6 hypothetical protein compare
MPMX20_00747 -1.4 -2.4 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_00807 -1.4 -1.0 Pyruvate dehydrogenase E1 component compare
MPMX20_02143 -1.4 -1.6 1,2-phenylacetyl-CoA epoxidase, subunit B compare
MPMX20_00540 -1.4 -5.2 Magnesium-transporting ATPase, P-type 1 compare
MPMX20_00234 -1.4 -5.3 Transcriptional repressor IclR compare
MPMX20_01488 -1.4 -1.8 hypothetical protein compare
MPMX20_01356 -1.4 -4.5 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_00216 -1.4 -4.8 Thiamine-phosphate synthase compare
MPMX20_02770 -1.4 -2.4 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_04463 -1.4 -2.3 DNA helicase II compare
MPMX20_04276 -1.4 -3.2 DNA adenine methylase compare
MPMX20_02766 -1.4 -1.3 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_01741 -1.4 -2.1 Dihydroorotase compare
MPMX20_02281 -1.4 -2.7 Transcriptional regulatory protein OmpR compare
MPMX20_03047 -1.4 -2.8 dCTP deaminase compare
MPMX20_01350 -1.4 -2.3 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_01273 -1.4 -3.2 Universal stress protein UP12 compare
MPMX20_03580 -1.4 -3.1 Protein RecA compare
MPMX20_04427 -1.4 -0.6 5S ribosomal RNA compare
MPMX20_02769 -1.4 -0.9 putative transcriptional regulatory protein YebC compare
MPMX20_03756 -1.4 -1.6 FAD assembly factor SdhE compare
MPMX20_03019 -1.4 -2.1 hypothetical protein compare
MPMX20_03443 -1.4 -2.9 Anti-sigma-E factor RseA compare
MPMX20_03227 -1.4 -2.4 Phosphate acetyltransferase compare
MPMX20_02098 -1.3 -4.6 HTH-type transcriptional repressor RspR compare
MPMX20_03636 -1.3 -2.5 Adenylyl-sulfate kinase compare
MPMX20_04585 -1.3 -3.4 HTH-type transcriptional repressor CsqR compare
MPMX20_01433 -1.3 -2.5 putative protein McbA compare
MPMX20_01156 -1.3 -1.8 hypothetical protein compare
MPMX20_02916 -1.3 -2.3 hypothetical protein compare
MPMX20_03780 -1.3 -2.3 Transketolase 1 compare
MPMX20_00009 -1.3 -3.9 putative 2-dehydro-3-deoxygalactonokinase DgoK1 compare
MPMX20_04616 -1.3 -2.0 Ribose import binding protein RbsB compare
MPMX20_04171 -1.3 -1.6 hypothetical protein compare
MPMX20_01974 -1.3 -0.9 Riboflavin synthase compare
MPMX20_03209 -1.3 -1.2 NADH-quinone oxidoreductase subunit K compare
MPMX20_02020 -1.3 -4.5 Mannose-6-phosphate isomerase compare
MPMX20_00739 -1.3 -2.7 Carbamoyl-phosphate synthase small chain compare
MPMX20_04243 -1.3 -0.6 hypothetical protein compare
MPMX20_00437 -1.3 -5.4 Fumarate reductase flavoprotein subunit compare
MPMX20_00740 -1.3 -4.8 Carbamoyl-phosphate synthase large chain compare
MPMX20_00106 -1.3 -0.9 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_00812 -1.3 -1.5 Aconitate hydratase B compare
MPMX20_00120 -1.3 -6.3 Murein hydrolase activator EnvC compare
MPMX20_03773 -1.3 -2.4 HTH-type transcriptional regulator ArgP compare
MPMX20_01762 -1.3 -4.4 Flagellar hook-associated protein 3 compare
MPMX20_02913 -1.2 -1.1 hypothetical protein compare
MPMX20_01101 -1.2 -0.9 Peptidyl-prolyl cis-trans isomerase B compare
MPMX20_01734 -1.2 -4.4 Lipid A biosynthesis lauroyltransferase compare
MPMX20_03812 -1.2 -3.0 dITP/XTP pyrophosphatase compare
MPMX20_03017 -1.2 -4.5 hypothetical protein compare
MPMX20_01186 -1.2 -2.7 Transcriptional activator protein ExaE compare
MPMX20_02591 -1.2 -2.3 DNA-binding protein H-NS compare
MPMX20_00434 -1.2 -2.6 Fumarate reductase subunit D compare
MPMX20_03408 -1.2 -1.0 Co-chaperone protein HscB compare
MPMX20_03010 -1.2 -0.8 UDP-glucose 4-epimerase compare
MPMX20_02774 -1.2 -3.5 Inner membrane protein YecN compare
MPMX20_04467 -1.2 -3.1 Diaminopimelate epimerase compare
MPMX20_04517 -1.2 -3.9 HTH-type transcriptional repressor FabR compare
MPMX20_04254 -1.2 -2.4 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase compare
MPMX20_04738 -1.2 -3.6 hypothetical protein compare
MPMX20_04597 -1.2 -3.9 DNA-binding transcriptional regulator NtrC compare
MPMX20_01019 -1.2 -3.7 Protoheme IX farnesyltransferase compare
MPMX20_01637 -1.2 -2.0 hypothetical protein compare
MPMX20_02775 -1.2 -2.9 Carboxy-S-adenosyl-L-methionine synthase compare
MPMX20_04200 -1.2 -2.3 HTH-type transcriptional regulator ZntR compare
MPMX20_04066 -1.2 -1.0 ATP-dependent RNA helicase DeaD compare
MPMX20_03407 -1.2 -1.6 Chaperone protein HscA compare
MPMX20_04465 -1.2 -1.8 Tyrosine recombinase XerC compare
MPMX20_00107 -1.2 -3.1 Lipopolysaccharide core heptosyltransferase RfaQ compare
MPMX20_00749 -1.2 -2.5 Chaperone SurA compare
MPMX20_03267 -1.2 -1.7 Phosphohistidine phosphatase SixA compare
MPMX20_00283 -1.2 -4.8 hypothetical protein compare
MPMX20_01098 -1.2 -1.6 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_00713 -1.1 -1.8 hypothetical protein compare
MPMX20_02696 -1.1 -2.8 Murein tetrapeptide carboxypeptidase compare


Specific Phenotypes

For 3 genes in this experiment

For mixed community TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2 in Enterobacter sp. TBS_079

For mixed community TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2 across organisms