Experiment set14S201 for Enterobacter sp. TBS_079

Compare to:

TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2

Group: mixed community
Media: TSB + TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2
Culturing: Enterobacter_TBS_079_ML3a, agar plate, Aerobic, at 30 (C), (Solid)
By: Robin on 4/17/25
Media components: 17 g/L Tryptone, 3 g/L soytone, 2.5 g/L D-Glucose, 5 g/L Sodium Chloride, 2.5 g/L Potassium phosphate dibasic

Specific Phenotypes

For 3 genes in this experiment

For mixed community TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2 in Enterobacter sp. TBS_079

For mixed community TSB plate, 1:1 coculture with Rhodococcus_aetherivorans_MH2 across organisms

SEED Subsystems

Subsystem #Specific
Serine-glyoxylate cycle 1
Succinate dehydrogenase 1
TCA Cycle 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
succinate to cytochrome bd oxidase electron transfer 2 2 1
glycerol-3-phosphate to fumarate electron transfer 2 2 1
NADH to fumarate electron transfer 2 2 1
succinate to cytochrome aa3 oxidase electron transfer 2 1 1
hydrogen to fumarate electron transfer 2 1 1
succinate to cytochrome bo oxidase electron transfer 2 1 1
aerobic respiration III (alternative oxidase pathway) 3 3 1
aerobic respiration II (cytochrome c) (yeast) 4 2 1
aerobic respiration I (cytochrome c) 4 2 1
incomplete reductive TCA cycle 7 5 1
pyruvate fermentation to propanoate I 7 3 1
TCA cycle VI (Helicobacter) 9 8 1
TCA cycle III (animals) 10 8 1
reductive TCA cycle I 11 8 1
L-glutamate degradation VIII (to propanoate) 11 3 1
reductive TCA cycle II 12 8 1
(S)-lactate fermentation to propanoate, acetate and hydrogen 13 7 1
mixed acid fermentation 16 16 1
Methanobacterium thermoautotrophicum biosynthetic metabolism 56 22 1