Experiment set14S164 for Phocaeicola vulgatus CL09T03C04

Fructooligosaccharides from chicory 10 mg/mL carbon source

Group: carbon source
Media: Varel_Bryant_medium + Fructooligosaccharides from chicory (10 mg/mL)
Culturing: Bvulgatus_CL09T03C04_ML5, 96 deep-well microplate; 1.2 mL volume, Anaerobic, at 37 (C), shaken=0 rpm
By: Surya on 7/3/25
Media components: 15 uM Hemin, 134 uM L-Methionine, 15 uM Iron (II) sulfate heptahydrate, 8.25 mM L-Cysteine, 23.8 mM Sodium bicarbonate, Mineral 3B solution (6.6 mM Potassium phosphate monobasic, 15.4 mM Sodium Chloride, 98 uM Magnesium chloride hexahydrate, 176.5 uM Calcium chloride dihydrate, 4.2 uM Cobalt chloride hexahydrate, 50.5 uM Manganese (II) chloride tetrahydrate, 9.3 mM Ammonium chloride, 1.75 mM Sodium sulfate)

Specific Phenotypes

For 5 genes in this experiment

For carbon source Fructooligosaccharides from chicory in Phocaeicola vulgatus CL09T03C04

For carbon source Fructooligosaccharides from chicory across organisms

SEED Subsystems

Subsystem	#Specific
Predicted carbohydrate hydrolases	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
Arg/N-end rule pathway (eukaryotic)	14	6	2