Experiment set14IT084 for Pseudomonas fluorescens SBW25-INTG

Compare to:

Glucose (C) and L-Glutamine (N); with TAPS

200 most important genes:

  gene name fitness t score description  
PFLU_RS28695 -4.1 -9.2 phosphoglycerate dehydrogenase compare
PFLU_RS23065 -3.9 -9.0 phosphate acyltransferase PlsX compare
PFLU_RS25640 -3.7 -12.6 ketol-acid reductoisomerase compare
PFLU_RS28535 -3.7 -16.2 dihydroxy-acid dehydratase compare
PFLU_RS20565 -3.3 -14.3 3-isopropylmalate dehydrogenase compare
PFLU_RS20580 -3.3 -12.6 3-isopropylmalate dehydratase large subunit compare
PFLU_RS28390 -3.3 -12.0 methionine biosynthesis protein MetW compare
PFLU_RS20575 -3.1 -7.2 3-isopropylmalate dehydratase small subunit compare
PFLU_RS20540 -3.1 -10.8 phosphoribosylanthranilate isomerase compare
PFLU_RS01605 -3.1 -8.6 imidazoleglycerol-phosphate dehydratase HisB compare
PFLU_RS24765 -3.1 -19.7 2-isopropylmalate synthase compare
PFLU_RS23070 -3.0 -1.8 50S ribosomal protein L32 compare
PFLU_RS01620 -2.8 -8.3 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
PFLU_RS25750 -2.8 -2.7 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PFLU_RS28385 -2.8 -13.8 homoserine O-acetyltransferase compare
PFLU_RS20515 -2.7 -5.5 amidophosphoribosyltransferase compare
PFLU_RS05750 -2.7 -3.5 methionine--tRNA ligase compare
PFLU_RS09055 -2.7 -1.9 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
PFLU_RS04465 -2.6 -9.8 ATP phosphoribosyltransferase compare
PFLU_RS20510 -2.6 -14.2 O-succinylhomoserine sulfhydrylase compare
PFLU_RS25645 -2.6 -3.5 acetolactate synthase small subunit compare
PFLU_RS00175 -2.6 -8.7 tryptophan synthase subunit alpha compare
PFLU_RS02490 -2.6 -12.6 phosphoserine phosphatase SerB compare
PFLU_RS01900 -2.5 -7.3 phosphoribosyl-AMP cyclohydrolase compare
PFLU_RS03075 -2.5 -2.4 translation initiation factor Sui1 compare
PFLU_RS04470 -2.5 -11.4 histidinol dehydrogenase compare
PFLU_RS01995 -2.5 -11.0 malate dehydrogenase compare
PFLU_RS01610 -2.5 -10.1 imidazole glycerol phosphate synthase subunit HisH compare
PFLU_RS28655 -2.4 -12.0 HAD family hydrolase compare
PFLU_RS28165 -2.4 -12.1 methylenetetrahydrofolate reductase [NAD(P)H] compare
PFLU_RS27370 -2.3 -12.0 anthranilate phosphoribosyltransferase compare
PFLU_RS24205 -2.3 -2.2 DNA binding protein compare
PFLU_RS00180 -2.2 -7.7 tryptophan synthase subunit beta compare
PFLU_RS02590 -2.2 -8.9 ATP phosphoribosyltransferase regulatory subunit compare
PFLU_RS11885 -2.2 -2.6 type II secretion system protein M compare
PFLU_RS29515 -2.2 -10.4 RidA family protein compare
PFLU_RS11475 -2.1 -1.3 histidine kinase compare
PFLU_RS13895 -2.1 -1.6 helix-turn-helix transcriptional regulator compare
PFLU_RS07245 -2.1 -7.6 DegQ family serine endoprotease compare
PFLU_RS22105 -2.1 -6.0 cysteine synthase CysM compare
PFLU_RS04835 -2.1 -1.5 hypothetical protein compare
PFLU_RS27650 -2.1 -7.5 biotin synthase BioB compare
PFLU_RS01625 -2.0 -2.3 imidazole glycerol phosphate synthase subunit HisF compare
PFLU_RS28820 -2.0 -2.4 aliphatic sulfonates ABC transporter ATP-binding protein compare
PFLU_RS00695 -2.0 -1.4 DUF2789 domain-containing protein compare
PFLU_RS21995 -2.0 -3.6 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
PFLU_RS27365 -2.0 -8.3 indole-3-glycerol phosphate synthase TrpC compare
PFLU_RS10430 -1.9 -4.2 peptidase compare
PFLU_RS08410 -1.9 -8.3 HTH-type transcriptional regulator CysB compare
PFLU_RS15410 -1.9 -2.1 zinc-dependent alcohol dehydrogenase family protein compare
PFLU_RS19900 -1.9 -2.7 general secretion pathway protein GspM compare
PFLU_RS22070 -1.8 -2.7 phosphoribosylglycinamide formyltransferase compare
PFLU_RS26565 -1.8 -2.0 rRNA maturation RNase YbeY compare
PFLU_RS05690 -1.8 -1.7 Grx4 family monothiol glutaredoxin compare
PFLU_RS28195 -1.8 -8.1 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
PFLU_RS12445 -1.7 -10.4 TonB-dependent siderophore receptor compare
PFLU_RS01955 -1.7 -6.1 DUF971 domain-containing protein compare
PFLU_RS12980 -1.7 -6.8 nitrite/sulfite reductase compare
PFLU_RS18505 -1.7 -7.1 uroporphyrinogen-III C-methyltransferase compare
PFLU_RS13010 -1.7 -4.3 Fe-S biogenesis protein NfuA compare
PFLU_RS25735 -1.6 -4.4 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS26640 -1.5 -7.4 septal ring lytic transglycosylase RlpA family protein compare
PFLU_RS13540 -1.5 -3.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
PFLU_RS22030 -1.5 -3.1 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
PFLU_RS23380 -1.5 -1.4 HAD-IB family hydrolase compare
PFLU_RS18530 -1.5 -3.1 DNA translocase FtsK compare
PFLU_RS21985 -1.4 -3.3 adenosylcobinamide-GDP ribazoletransferase compare
PFLU_RS02670 -1.4 -2.9 hypothetical protein compare
PFLU_RS27645 -1.4 -6.8 8-amino-7-oxononanoate synthase compare
PFLU_RS01670 -1.4 -6.5 protein-export chaperone SecB compare
PFLU_RS15910 -1.4 -2.1 homoprotocatechuate degradation operon regulator HpaR compare
PFLU_RS12450 -1.4 -7.6 cyclic peptide export ABC transporter compare
PFLU_RS12975 -1.4 -3.5 DUF934 domain-containing protein compare
PFLU_RS04565 -1.3 -1.3 TMEM165/GDT1 family protein compare
PFLU_RS15610 -1.3 -4.1 helix-turn-helix transcriptional regulator compare
PFLU_RS24860 -1.3 -1.5 Fe-S cluster assembly transcriptional regulator IscR compare
PFLU_RS26290 -1.3 -1.0 2Fe-2S iron-sulfur cluster binding domain-containing protein compare
PFLU_RS22740 -1.3 -3.2 phosphoadenylyl-sulfate reductase compare
PFLU_RS18885 -1.3 -2.0 peptidyl-prolyl cis-trans isomerase compare
PFLU_RS22005 -1.3 -7.4 cobyric acid synthase compare
PFLU_RS25215 -1.3 -5.9 cytochrome o ubiquinol oxidase subunit I compare
PFLU_RS03970 -1.3 -5.7 carboxylating nicotinate-nucleotide diphosphorylase compare
PFLU_RS01895 -1.3 -5.2 phosphoribosyl-ATP diphosphatase compare
PFLU_RS08650 -1.3 -1.9 heme exporter protein CcmB compare
PFLU_RS25925 -1.2 -1.9 RnfH family protein compare
PFLU_RS21495 -1.2 -1.6 TlpA family protein disulfide reductase compare
PFLU_RS15990 -1.2 -2.2 SDR family oxidoreductase compare
PFLU_RS02365 -1.2 -6.9 glycosyltransferase compare
PFLU_RS08575 -1.2 -2.6 hypothetical protein compare
PFLU_RS26505 -1.2 -2.4 DUF2788 domain-containing protein compare
PFLU_RS12260 -1.2 -1.4 hypothetical protein compare
PFLU_RS24025 -1.2 -7.3 quinolinate synthase NadA compare
PFLU_RS02980 -1.2 -1.6 precorrin-8X methylmutase compare
PFLU_RS31800 -1.2 -1.8 hypothetical protein compare
PFLU_RS25740 -1.2 -4.1 polynucleotide adenylyltransferase PcnB compare
PFLU_RS07910 -1.2 -2.0 type 1 fimbrial protein compare
PFLU_RS22000 -1.2 -5.3 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
PFLU_RS03665 -1.1 -3.4 molybdopterin-synthase adenylyltransferase MoeB compare
PFLU_RS31475 -1.1 -2.3 hypothetical protein compare
PFLU_RS23590 -1.1 -0.9 gluconokinase compare
PFLU_RS19635 -1.1 -3.2 SDR family oxidoreductase compare
PFLU_RS27630 -1.1 -2.4 dethiobiotin synthase compare
PFLU_RS10045 -1.1 -2.0 hypothetical protein compare
PFLU_RS27475 -1.1 -3.5 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
PFLU_RS04435 -1.1 -3.9 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
PFLU_RS28965 -1.1 -5.2 5-formyltetrahydrofolate cyclo-ligase compare
PFLU_RS03765 -1.1 -5.8 sulfate adenylyltransferase subunit CysD compare
PFLU_RS01485 -1.1 -7.5 cellulase compare
PFLU_RS13750 -1.1 -1.1 hypothetical protein compare
PFLU_RS27635 -1.1 -3.7 malonyl-ACP O-methyltransferase BioC compare
PFLU_RS29065 -1.1 -1.0 amino acid ABC transporter ATP-binding protein compare
PFLU_RS02975 -1.1 -5.2 precorrin-3B synthase compare
PFLU_RS07255 -1.1 -2.5 sulfurtransferase TusA family protein compare
PFLU_RS31650 -1.1 -2.4 hypothetical protein compare
PFLU_RS03555 -1.1 -0.9 EscS/YscS/HrcS family type III secretion system export apparatus protein compare
PFLU_RS08990 -1.1 -1.7 hypothetical protein compare
PFLU_RS25025 -1.1 -1.9 hypothetical protein compare
PFLU_RS05590 -1.0 -4.1 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme compare
PFLU_RS24090 -1.0 -0.7 Holliday junction branch migration protein RuvA compare
PFLU_RS19160 -1.0 -5.1 endopeptidase La compare
PFLU_RS21990 -1.0 -4.4 alpha-ribazole phosphatase family protein compare
PFLU_RS09505 -1.0 -2.4 HU family DNA-binding protein compare
PFLU_RS18250 -1.0 -2.2 DUF2160 domain-containing protein compare
PFLU_RS23390 -1.0 -1.5 AbrB/MazE/SpoVT family DNA-binding domain-containing protein compare
PFLU_RS19420 -1.0 -3.3 sigma-70 family RNA polymerase sigma factor compare
PFLU_RS13050 -1.0 -3.3 VWA domain-containing protein compare
PFLU_RS04715 -1.0 -4.0 D-alanine--D-alanine ligase compare
PFLU_RS06320 -1.0 -2.3 OmpH family outer membrane protein compare
PFLU_RS14155 -1.0 -2.4 hypothetical protein compare
PFLU_RS31100 -1.0 -2.0 preprotein translocase subunit SecG compare
PFLU_RS21445 -1.0 -3.5 RluA family pseudouridine synthase compare
PFLU_RS10835 -1.0 -1.8 enoyl-CoA hydratase/isomerase family protein compare
PFLU_RS31275 -1.0 -1.1 hypothetical protein compare
PFLU_RS31490 -1.0 -1.1 hypothetical protein compare
PFLU_RS06680 -0.9 -3.2 hypothetical protein compare
PFLU_RS18000 -0.9 -1.4 AhpC/TSA family protein compare
PFLU_RS18910 -0.9 -3.0 MarR family transcriptional regulator compare
PFLU_RS00870 -0.9 -1.0 hypothetical protein compare
PFLU_RS21315 -0.9 -3.1 GTP cyclohydrolase I FolE compare
PFLU_RS19175 -0.9 -4.3 trigger factor compare
PFLU_RS31445 -0.9 -2.2 colicin immunity protein compare
PFLU_RS02275 -0.9 -1.1 pyruvate dehydrogenase (acetyl-transferring), homodimeric type compare
PFLU_RS29360 -0.9 -1.3 cytochrome c5 family protein compare
PFLU_RS31795 -0.9 -3.3 hypothetical protein compare
PFLU_RS31310 -0.9 -1.4 phage tail protein compare
PFLU_RS22025 -0.9 -6.5 cobyrinate a,c-diamide synthase compare
PFLU_RS07225 -0.9 -6.9 L-aspartate oxidase compare
PFLU_RS16935 -0.9 -1.8 CoA ester lyase compare
PFLU_RS04430 -0.9 -3.7 ATP-binding cassette domain-containing protein compare
PFLU_RS13015 -0.9 -3.3 precorrin-4 C(11)-methyltransferase compare
PFLU_RS31635 -0.9 -1.9 IS21 family transposase compare
PFLU_RS18005 -0.9 -1.6 acyl-CoA/acyl-ACP dehydrogenase compare
PFLU_RS02455 -0.9 -1.3 3',5'-cyclic-AMP phosphodiesterase compare
PFLU_RS23220 -0.9 -2.1 tRNA-Arg compare
PFLU_RS07935 -0.9 -2.4 type 1 fimbrial protein compare
PFLU_RS02355 -0.9 -3.2 GNAT family N-acetyltransferase compare
PFLU_RS28420 -0.9 -4.2 thiazole synthase compare
PFLU_RS11060 -0.9 -2.6 DUF3592 domain-containing protein compare
PFLU_RS02860 -0.9 -1.5 urease subunit beta compare
PFLU_RS14545 -0.8 -2.1 hypothetical protein compare
PFLU_RS02115 -0.8 -1.4 outer membrane lipoprotein carrier protein LolA compare
PFLU_RS30790 -0.8 -1.8 hypothetical protein compare
PFLU_RS24085 -0.8 -1.1 Holliday junction branch migration DNA helicase RuvB compare
PFLU_RS25220 -0.8 -3.9 ubiquinol oxidase subunit II compare
PFLU_RS01315 -0.8 -1.8 Hsp33 family molecular chaperone HslO compare
PFLU_RS22470 -0.8 -1.9 hypothetical protein compare
PFLU_RS07045 -0.8 -2.8 addiction module toxin, HicA family compare
PFLU_RS23585 -0.8 -3.9 GntP family permease compare
PFLU_RS11980 -0.8 -3.5 precorrin-6A synthase (deacetylating) compare
PFLU_RS05050 -0.8 -1.3 response regulator transcription factor compare
PFLU_RS23725 -0.8 -3.9 glucose-6-phosphate dehydrogenase compare
PFLU_RS25730 -0.8 -5.7 PAS domain S-box protein compare
PFLU_RS11685 -0.8 -2.2 AraC family transcriptional regulator compare
PFLU_RS13835 -0.8 -2.4 phage recombination protein Bet compare
PFLU_RS02965 -0.8 -4.3 cobalt-precorrin-6A reductase compare
PFLU_RS21360 -0.8 -1.2 MarR family transcriptional regulator compare
PFLU_RS23940 -0.8 -2.6 hypothetical protein compare
PFLU_RS30800 -0.8 -2.5 ThiF family adenylyltransferase compare
PFLU_RS24050 -0.8 -4.8 tol-pal system protein YbgF compare
PFLU_RS26490 -0.8 -1.4 cation diffusion facilitator family transporter compare
PFLU_RS21915 -0.8 -3.2 MarR family transcriptional regulator compare
PFLU_RS27910 -0.8 -1.2 helix-turn-helix transcriptional regulator compare
PFLU_RS25210 -0.8 -2.3 cytochrome o ubiquinol oxidase subunit III compare
PFLU_RS29905 -0.8 -3.1 Tim44 domain-containing protein compare
PFLU_RS28315 -0.8 -0.6 response regulator compare
PFLU_RS15180 -0.8 -1.7 Lrp/AsnC family transcriptional regulator compare
PFLU_RS04440 -0.8 -4.1 outer membrane lipid asymmetry maintenance protein MlaD compare
PFLU_RS11600 -0.8 -2.7 metallophosphoesterase family protein compare
PFLU_RS22095 -0.8 -5.9 GTP diphosphokinase compare
PFLU_RS24330 -0.8 -2.7 phosphogluconate dehydratase compare
PFLU_RS18420 -0.8 -1.3 hypothetical protein compare
PFLU_RS12800 -0.8 -1.0 amino acid ABC transporter ATP-binding protein compare
PFLU_RS10245 -0.8 -4.1 polysaccharide export protein compare
PFLU_RS12175 -0.8 -1.1 methyl-accepting chemotaxis protein compare
PFLU_RS22605 -0.8 -3.4 mechanosensitive ion channel compare
PFLU_RS27805 -0.7 -1.7 sarcosine oxidase subunit gamma family protein compare
PFLU_RS05585 -0.7 -2.7 MtnX-like HAD-IB family phosphatase compare
PFLU_RS18115 -0.7 -2.5 thioesterase compare
PFLU_RS17615 -0.7 -1.2 DeoR/GlpR transcriptional regulator compare
PFLU_RS19775 -0.7 -3.6 ABC transporter permease compare


Specific Phenotypes

For 2 genes in this experiment

For no stress control D-Glucose in Pseudomonas fluorescens SBW25-INTG

For no stress control D-Glucose across organisms