Experiment set14IT080 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

MoLS4 with N2 nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
DVU3392 glnA +2.3 18.3 glutamine synthetase, type I (TIGR) compare
DVU0077 +1.8 13.9 conserved hypothetical protein (TIGR) compare
DVU0451 +1.8 15.1 chloride channel family protein (TIGR) compare
DVU0671 +1.7 12.4 conserved hypothetical protein (TIGR) compare
DVU0642 +1.7 8.5 hydrolase, alpha/beta fold family (TIGR) compare
DVU1726 +1.6 3.3 hypothetical protein (TIGR) compare
DVU1520 +1.6 1.4 hypothetical protein (TIGR) compare
DVU2473 +1.4 1.3 hypothetical protein (TIGR) compare
DVU0300 +1.2 1.0 radical SAM domain protein (TIGR) compare
DVU1061 +1.1 1.5 glycosyl transferase, group 1 family protein (TIGR) compare
DVU0951 moeA-2 +1.1 5.0 molybdopterin biosynthesis MoeA protein, putative (TIGR) compare
DVUA0084 +1.1 1.7 transcriptional regulator, AbrB family (TIGR) compare
DVU1436 +1.1 1.3 hypothetical protein (TIGR) compare
DVU1604 +1.1 4.9 hypothetical protein (TIGR) compare
DVU2956 flrA +1.0 1.7 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU3302 +1.0 3.1 hypothetical protein (TIGR) compare
DVU0384 flr +1.0 4.4 flavoredoxin (TIGR) compare
DVU2910 +1.0 5.7 membrane protein, putative (TIGR) compare
DVU2957 +1.0 0.7 hypothetical protein (TIGR) compare
DVU2915 +1.0 1.4 hypothetical protein (TIGR) compare
DVU2342 +1.0 5.1 amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) compare
DVU1450 +1.0 4.2 anti-sigma factor, putative (TIGR) compare
DVU0392 +0.9 6.4 aromatic aminotransferase (TIGR) compare
DVU0769 +0.9 5.4 pyridoxal kinase, putative (TIGR) compare
DVU0196 +0.9 1.1 hypothetical protein (TIGR) compare
DVU0484 +0.9 3.6 ABC transporter, ATP-binding protein (TIGR) compare
DORF18707 +0.9 0.7 no description compare
DVU2746 +0.8 6.2 conserved hypothetical protein (TIGR) compare
DVU0456 +0.8 4.3 DHH family protein (TIGR) compare
DVU0968 +0.8 4.3 amino acid ABC transporter, ATP-binding protein (TIGR) compare
DVU0966 +0.8 4.6 amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) compare
DVU0485 +0.8 4.8 membrane protein, putative (TIGR) compare
DVU0008 +0.8 0.6 hypothetical protein (TIGR) compare
DORF35977 +0.8 5.3 no description compare
DVU2510 +0.7 0.6 penicillin-binding protein (TIGR) compare
DVU2184 +0.7 2.6 DNA-binding domain, excisionase family (TIGR) compare
DVU1375 +0.7 4.2 hypothetical protein (TIGR) compare
DVU1260 +0.7 3.9 outer membrane protein P1, putative (TIGR) compare
DVU3326 +0.7 2.2 multidrug resistance protein, Smr family (TIGR) compare
DVU2990 moeA +0.7 5.5 molybdopterin biosynthesis MoeA protein (TIGR) compare
DVU0035 +0.7 1.9 hypothetical protein (TIGR) compare
DVU2207 +0.7 0.6 hypothetical protein (TIGR) compare
DVU1448 +0.7 3.7 conserved hypothetical protein (TIGR) compare
DVU1179 aor +0.7 4.0 aldehyde:ferredoxin oxidoreductase, tungsten-containing (TIGR) compare
DVU1506 +0.6 1.4 hypothetical protein (TIGR) compare
DVU2076 cheR-2 +0.6 3.6 chemotaxis protein methyltransferase (TIGR) compare
DVU1280 +0.6 2.4 conserved hypothetical protein TIGR00159 (TIGR) compare
DVU1192 acyP +0.6 1.2 acylphosphatase (TIGR) compare
DVU2657 +0.6 1.1 6-pyruvoyl tetrahydrobiopterin synthase, putative (TIGR) compare
DVU1358 +0.6 2.8 hydrolase, haloacid dehalogenase-like family (TIGR) compare
DVU1419 atoC +0.6 3.7 sigma-54 dependent transcriptional regulator/response regulator (TIGR) compare
DVU0289 moaC +0.6 3.8 molybdenum cofactor biosynthesis protein C (TIGR) compare
DVU3175 +0.6 1.3 membrane protein, putative (TIGR) compare
DVU1727 +0.6 1.3 hypothetical protein (TIGR) compare
DVU0078 +0.6 1.9 conserved hypothetical protein (TIGR) compare
DVU3177 +0.6 1.1 hypothetical protein (TIGR) compare
DVU0967 +0.6 4.0 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU1145 +0.6 1.0 hypothetical protein (TIGR) compare
DVU0359 +0.6 1.7 HesB-like domain (TIGR) compare
DVU2850 +0.6 0.8 tail protein, putative (TIGR) compare
DVU1408 +0.6 3.4 hypothetical protein (TIGR) compare
DVU2343 glnQ +0.6 4.0 amino acid ABC transporter, ATP-binding protein (TIGR) compare
DVU0618 +0.6 0.6 hypothetical protein (TIGR) compare
DVUA0141 +0.6 1.7 hypothetical protein (TIGR) compare
DORF25031 +0.6 1.9 SEED: FIG00606465: hypothetical protein compare
DVU1939 +0.6 2.7 anaerobic glycerol-3-phosphate dehydrogenase, B subunit, putative (TIGR) compare
DVUA0116 +0.6 2.8 conserved hypothetical protein (TIGR) compare
DVU2843 vsr +0.6 2.9 DNA mismatch endonuclease Vsr, putative (TIGR) compare
DVU3267 +0.5 2.4 hypothetical protein (TIGR) compare
DVU2212 +0.5 2.9 conserved hypothetical protein (TIGR) compare
DVU1084 pstB-1 +0.5 2.6 phosphate ABC transporter, ATP-binding protein (TIGR) compare
DVU0417 speA +0.5 3.5 arginine decarboxylase (TIGR) compare
DVU0051 +0.5 3.5 conserved hypothetical protein TIGR00044 (TIGR) compare
DVU1380 +0.5 1.2 hypothetical protein (TIGR) compare
DVU2072 cheA-3 +0.5 3.5 chemotaxis protein CheA (TIGR) compare
DVU2865 +0.5 0.5 lipoprotein, putative (TIGR) compare
DVU0995 +0.5 1.5 ThiJ/PfpI family protein (TIGR) compare
DVU1088 +0.5 1.3 hypothetical protein (TIGR) compare
DVU0971 +0.5 1.8 molybdenum cofactor biosynthesis protein (TIGR) compare
DVU2846 +0.5 1.2 hypothetical protein (TIGR) compare
DVU2818 +0.5 2.0 hypothetical protein (TIGR) compare
DVU1825 +0.5 4.0 amidohydrolase family protein (TIGR) compare
DVU2418 +0.5 2.0 vanZ-like family protein (TIGR) compare
DORF43335 +0.5 0.6 no description compare
DVU0595 +0.5 1.4 conserved hypothetical protein (TIGR) compare
DVU1137 +0.5 1.0 hypothetical protein (TIGR) compare
DVU2340 +0.5 2.7 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU1824 +0.5 2.5 conserved hypothetical protein (TIGR) compare
DVU0280 wbaZ-2 +0.5 1.2 glycosyl transferase, group 1 family protein (TIGR) compare
DVU0252 +0.5 1.1 hypothetical protein (TIGR) compare
DVU2251 +0.5 2.8 DNA-binding protein (TIGR) compare
DVU2579 +0.5 2.3 TPR domain protein (TIGR) compare
DVU3339.1 kdpF +0.5 2.0 potassium-transporting ATPase, KdpF subunit (TIGR) compare
DVU1133 +0.5 1.8 hypothetical protein (TIGR) compare
DVU1960 cheA-2 +0.5 3.5 chemotaxis protein CheA (TIGR) compare
DVU1080 +0.5 0.9 iron-sulfur cluster-binding protein (TIGR) compare
DVU1850 +0.4 1.2 CBS domain protein (TIGR) compare
DVU2479 pstA-2 +0.4 3.5 phosphate ABC transporter, permease protein, putative (TIGR) compare
DVU0378 +0.4 1.5 thioredoxin, putative (TIGR) compare
DVU2105 +0.4 1.9 hypothetical protein (TIGR) compare
DVU1814 +0.4 1.3 cytochrome c oxidase, subunit III, putative (TIGR) compare
DVU0368 +0.4 1.1 hypothetical protein (TIGR) compare
DVUA0030 +0.4 2.1 hypothetical protein (TIGR) compare
DVU1589 +0.4 1.6 hypothetical protein (TIGR) compare
DVU3193 +0.4 2.0 DNA-binding domain, excisionase family (TIGR) compare
DVU2677 +0.4 3.0 sensor histidine kinase/response regulator (TIGR) compare
DVU2023 +0.4 3.1 hypothetical protein (TIGR) compare
DVU1961 cheW-3 +0.4 0.9 chemotaxis protein CheW (TIGR) compare
DVU1762 +0.4 0.9 membrane protein, putative (TIGR) compare
DVU1223 +0.4 3.3 conserved hypothetical protein (TIGR) compare
DVU3214 +0.4 3.2 phosphoenolpyruvate synthase-related protein (TIGR) compare
DVU2516 +0.4 2.8 CBS domain protein (TIGR) compare
DVU2341 +0.4 2.2 amino acid ABC transproter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU0794 fabI +0.4 1.2 enoyl-(acyl-carrier-protein) reductase (TIGR) compare
DVU0988 cbhK +0.4 2.2 carbohydrate kinase, PfkB family (TIGR) compare
DVU0657 +0.4 0.8 heat shock protein, Hsp20 family (TIGR) compare
DVU0386 glnH +0.4 2.1 amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) compare
DVU0624 nrfH +0.4 1.8 NapC/NirT cytochrome c family protein (TIGR) compare
DVU0909 +0.4 1.7 hypothetical protein (TIGR) compare
DVU1262 pilT-1 +0.4 1.6 twitching motility protein PilT (TIGR) compare
DVU1522 +0.4 1.6 hypothetical protein (TIGR) compare
DVU2209 +0.4 2.1 conserved hypothetical protein (TIGR) compare
DORF9585 +0.4 0.5 no description compare
DVU0893 +0.4 1.7 universal stress protein family (TIGR) compare
DVU3274 +0.4 1.2 hypothetical protein (TIGR) compare
DVU1621 +0.4 1.2 hypothetical protein (TIGR) compare
DVU1774 +0.4 2.3 hypothetical protein (TIGR) compare
DVU1071 +0.4 1.8 hypothetical protein (TIGR) compare
DVU0580 moaA +0.4 1.5 molybdenum cofactor biosynthesis protein A (TIGR) compare
DVU0669 +0.4 1.1 hypothetical protein (TIGR) compare
DVU0400 +0.4 1.7 hypothetical protein (TIGR) compare
DVU2362 thiE-2 +0.4 0.6 thiamine-phosphate pyrophosphorylase (TIGR) compare
DVU0569 flrA +0.4 2.4 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU2774 +0.4 1.6 CBS domain protein/ACT domain protein (TIGR) compare
DVU0029 +0.4 2.3 hydantoinase/oxoprolinase family protein (TIGR) compare
DVU0713 livH +0.4 2.4 branched-chain amino acid ABC transporter, permease protein (TIGR) compare
DVU2821 +0.4 1.1 hypothetical protein (TIGR) compare
DORF12810 +0.4 1.3 no description compare
DVU1374 +0.4 1.5 conserved hypothetical protein (TIGR) compare
DVU2863 +0.4 0.4 hypothetical protein (TIGR) compare
DVU1873 ppiB-2 +0.4 1.4 peptidyl-prolyl cis-trans isomerase B (TIGR) compare
DVU1030 +0.4 0.7 universal stress protein family (TIGR) compare
DVU2911 +0.4 1.7 hemolysin A (TIGR) compare
DVU1274 +0.4 1.7 hypothetical protein (TIGR) compare
DVU2250 +0.4 1.2 AMP-binding protein (TIGR) compare
DVU1387 +0.4 2.0 conserved hypothetical protein (TIGR) compare
DVU1996 +0.4 1.1 quaternary ammonium compound-resistance protein QacC, putative (TIGR) compare
DVU0293 +0.4 1.4 prokaryotic dksA/traR C4-type zinc finger family protein (TIGR) compare
DVU1451 +0.4 2.0 response regulator (TIGR) compare
DVU1715 +0.4 2.1 hypothetical protein (TIGR) compare
DVU1092 +0.4 2.9 sodium-dependent symporter family protein (TIGR) compare
DVU0339 serA +0.4 2.0 D-isomer specific 2-hydroxyacid dehydrogenase family protein (TIGR) compare
DVU2715 +0.4 1.4 conserved hypothetical protein (TIGR) compare
DVU2307 +0.4 1.4 C4-type zinc finger protein, DksA/TraR family (TIGR) compare
DVU1887 +0.4 2.7 hypothetical protein (TIGR) compare
DVU1087 +0.4 1.5 conserved hypothetical protein (TIGR) compare
DVU3342 +0.4 2.0 hypothetical protein (TIGR) compare
DVU0736 purN +0.4 1.6 phosphoribosylglycinamide formyltransferase (TIGR) compare
DVU2578 +0.3 1.9 response regulator (TIGR) compare
DVU3213 +0.3 1.6 hypothetical protein (TIGR) compare
DVU3011 +0.3 2.0 conserved hypothetical protein (TIGR) compare
DVU0527 maF +0.3 1.5 septum formation protein Maf (TIGR) compare
DVU2096 +0.3 1.0 hypothetical protein (TIGR) compare
DVU0454 +0.3 1.8 hypothetical protein (TIGR) compare
DVU0421 +0.3 1.9 agmatinase, putative (TIGR) compare
DORF123 +0.3 1.6 SEED: FIG00603348: hypothetical protein compare
DVU2389 tolR +0.3 0.8 biopolymer transport protein, ExbD/TolR family (TIGR) compare
DVU2907 umuD +0.3 1.8 umuD protein (TIGR) compare
DVU1193 radC +0.3 1.9 DNA repair protein RadC (TIGR) compare
DVU0746 cysW +0.3 1.9 ABC transporter, permease protein (TIGR) compare
DVU0014 infA-1 +0.3 0.6 translation initiation factor IF-1 (TIGR) compare
DVU1104 +0.3 0.9 baseplate assembly protein, putative (TIGR) compare
DVU0745 +0.3 1.8 ABC transporter, periplasmic substrate-binding protein (TIGR) compare
DVU0658 +0.3 1.1 heat shock protein, Hsp20 family (TIGR) compare
DVU2231 typA +0.3 2.3 GTP-binding protein TypA (TIGR) compare
DVU1480 +0.3 1.6 conserved domain protein (TIGR) compare
DVU1393 +0.3 0.6 hypothetical protein (TIGR) compare
DVU2471 +0.3 2.2 oxidoreductase, selenocysteine-containing (TIGR) compare
DVU0714 livM +0.3 1.6 branched-chain amino acid ABC transporter, permease protein (TIGR) compare
DVU0598 +0.3 1.4 carbon starvation protein A, putative (TIGR) compare
DVU2891 nikR +0.3 1.1 nickel responsive regulator (TIGR) compare
DVU2090 +0.3 1.8 EF hand domain protein (TIGR) compare
DVU2120 +0.3 1.0 hypothetical protein (TIGR) compare
DVU3187 hup-4 +0.3 1.3 DNA-binding protein HU (TIGR) compare
DVU2232 +0.3 1.4 hypothetical protein (TIGR) compare
DVU0802 +0.3 0.2 hypothetical protein (TIGR) compare
DVU2489 +0.3 1.6 hypothetical protein (TIGR) compare
DVU0452 +0.3 2.0 hypothetical protein (TIGR) compare
DVU1962 +0.3 2.5 methyl-accepting chemotaxis protein (TIGR) compare
DVU2269 +0.3 1.0 hypothetical protein (TIGR) compare
DVU1491 +0.3 0.7 conserved hypothetical protein (TIGR) compare
DVUA0024 atoC +0.3 1.8 sigma-54 interaction domain protein (TIGR) compare
DVU0258 +0.3 2.1 sensory box histidine kinase/response regulator (TIGR) compare
DVU0439 +0.3 1.5 YCII-related domain protein (TIGR) compare
DVU0643 +0.3 1.7 thiF protein, putative (TIGR) compare
DVU0430 +0.3 2.3 Ech hydrogenase, subunit EchE, putative (TIGR) compare
DVU2025 +0.3 2.7 conserved hypothetical protein (TIGR) compare
DVU1716 +0.3 2.1 hypothetical protein (TIGR) compare
DVU2075 parA +0.3 0.8 ParA family protein (TIGR) compare
DORF38058 +0.3 0.3 SEED: FIG00604017: hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For nitrogen source N2 in Desulfovibrio vulgaris Hildenborough JW710

For nitrogen source N2 across organisms