Experiment set14IT075 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

MoLS4 with Butyrate 10mM

200 most detrimental genes:

  gene name fitness t score description  
DVU2867 +1.4 2.6 holin (TIGR) compare
DVU0046 fliN +1.0 4.9 flagellar motor switch protein FliN (TIGR) compare
DVU2915 +1.0 2.1 hypothetical protein (TIGR) compare
DVU1520 +1.0 0.8 hypothetical protein (TIGR) compare
DVU1862 +1.0 3.8 GGDEF domain protein (TIGR) compare
DVU3234 +1.0 6.0 flagellar biosynthetic protein FliR (TIGR) compare
DVU0514 +0.9 6.9 FlgA family protein (TIGR) compare
DVU3233 flhB +0.9 6.6 flagellar biosynthetic protein FlhB (TIGR) compare
DVU1429 +0.9 0.8 GTP-binding protein (TIGR) compare
DVU0043 fliQ +0.9 5.0 flagellar biosynthetic protein FliQ (TIGR) compare
DVU0310 fliI +0.9 7.0 flagellum-specific ATP synthase FliI (TIGR) compare
DVU0316 flgB +0.9 2.4 flagellar basal-body rod protein FlgB (TIGR) compare
DVU2198 +0.9 0.7 hypothetical protein (TIGR) compare
DVU0516 flgI +0.8 5.7 flagellar P-ring protein FlgI (TIGR) compare
DVU0045 +0.8 4.8 flagellar biosynthesis protein, FliO, putative (TIGR) compare
DVU0315 flgC +0.8 5.5 flagellar basal-body rod protein FlgC (TIGR) compare
DVU0515 flgH +0.8 5.9 flagellar L-ring protein FlgH (TIGR) compare
DVU0311 +0.8 4.8 flagellar assembly protein FliH, putative (TIGR) compare
DVU1075 rnpA +0.8 0.5 ribonuclease P protein component (TIGR) compare
DVU3227 +0.8 3.8 flagellar basal body-associated protein, putative (TIGR) compare
DVU2012 +0.8 0.7 hypothetical protein (TIGR) compare
DVU1444 flgD +0.8 4.5 basal-body rod modification protein FlgD (TIGR) compare
DVU2894 flrA +0.8 4.1 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU2896 +0.8 6.6 TPR domain protein (TIGR) compare
DVU2669 +0.8 2.4 conserved domain protein (TIGR) compare
DVU0420 +0.7 0.7 hypothetical protein (TIGR) compare
DVU1748 +0.7 0.5 conserved hypothetical protein (TIGR) compare
DVU1210 +0.7 0.4 conserved hypothetical protein (TIGR) compare
DVU0314 fliE +0.7 3.8 flagellar basal body component FliE (TIGR) compare
DVU1420 +0.7 1.2 Hpt domain protein (TIGR) compare
DVU0910 fliM +0.7 4.7 flagellar motor switch protein FliM (TIGR) compare
DVU0513 flgG +0.7 4.2 flagellar basal-body rod protein FlgG (TIGR) compare
DVU3232 flhA +0.7 5.9 flagellar biosynthetic protein FlhA (TIGR) compare
DVU0519 +0.7 6.1 flagellar hook-associated protein FlgK, putative (TIGR) compare
DVU2187 +0.7 3.4 hypothetical protein (TIGR) compare
DVU3133 glpF +0.7 1.3 glycerol uptake facilitator protein (TIGR) compare
DVU2877 +0.7 2.7 hypothetical protein (TIGR) compare
DVU0313 fliF +0.7 5.0 flagellar M-ring protein FliF (TIGR) compare
DORF8192 +0.7 1.6 SEED: FIG00606834: hypothetical protein compare
DVU0913 +0.7 3.6 conserved hypothetical protein (TIGR) compare
DVU2325 merP +0.7 1.1 mercuric transport protein periplasmic component (TIGR) compare
DVU2879 +0.7 2.4 conserved hypothetical protein (TIGR) compare
DVU1363 rfbD +0.6 2.6 dTDP-4-dehydrorhamnose reductase (TIGR) compare
DVU0174 +0.6 1.6 hypothetical protein (TIGR) compare
DVU0307 +0.6 4.4 flagella basal body rod domain protein (TIGR) compare
DVU0512 flgF +0.6 3.3 flagellar basal-body rod protein, putative (TIGR) compare
DVU0912 +0.6 2.6 conserved domain protein (TIGR) compare
DVU0047 +0.6 2.3 flagellar protein FliL (TIGR) compare
DVU2871 +0.6 2.5 minor capsid protein C (TIGR) compare
DVU0034 +0.6 4.0 DSBA-like thioredoxin domain protein (TIGR) compare
DVU1838 trxB-2 +0.6 1.5 thioredoxin reductase (TIGR) compare
DVU0301 +0.6 0.7 hypothetical protein (TIGR) compare
DVU1465 +0.6 4.4 CgeB family protein (TIGR) compare
DVU1567 +0.6 2.6 hypothetical protein (TIGR) compare
DVU0518 +0.6 3.6 hypothetical protein (TIGR) compare
DVU1875 +0.6 2.1 dafA protein (TIGR) compare
DVU3387 +0.6 4.2 hypothetical protein (TIGR) compare
DVU0097 potB +0.6 2.2 polyamine ABC transporter, permease protein (TIGR) compare
DVU0858 +0.6 4.2 lipoprotein, putative (TIGR) compare
DVU3393 +0.6 1.0 hypothetical protein (TIGR) compare
DVU2200 +0.6 0.7 hypothetical protein (TIGR) compare
DVU1491 +0.6 1.1 conserved hypothetical protein (TIGR) compare
DVU1443 flgE +0.6 3.3 flagellar hook protein FlgE (TIGR) compare
DVU0975 +0.6 1.6 conserved hypothetical protein (TIGR) compare
DVU0764 hup-2 +0.6 2.1 DNA-binding protein HU (TIGR) compare
DVU2761 +0.6 0.4 hypothetical protein (TIGR) compare
DVU0410 +0.5 3.2 hypothetical protein (TIGR) compare
DVU0044 fliP +0.5 2.8 flagellar biosynthetic protein fliP (TIGR) compare
DVU0793 +0.5 2.3 hypothetical protein (TIGR) compare
DVU0196 +0.5 0.6 hypothetical protein (TIGR) compare
DVU2847 +0.5 2.2 hypothetical protein (TIGR) compare
DVU3065 +0.5 3.5 AMP-binding enzyme family protein (TIGR) compare
DVU0195 +0.5 1.7 hypothetical protein (TIGR) compare
DVU2184 +0.5 1.4 DNA-binding domain, excisionase family (TIGR) compare
DVU1863 +0.5 2.4 flagellar synthesis regulator FleN, putative (TIGR) compare
DVU0312 fliG +0.5 3.3 flagellar motor switch protein FliG (TIGR) compare
DVU2138 +0.5 1.4 conserved hypothetical protein (TIGR) compare
DVU1193 radC +0.5 2.0 DNA repair protein RadC (TIGR) compare
DVU0863 +0.5 3.8 flagellar hook-associated protein 2, putative (TIGR) compare
DVU2391 +0.5 0.5 hypothetical protein (TIGR) compare
DORF14650 +0.5 1.3 no description compare
DVU1464 +0.5 3.8 heptosyltransferase family protein (TIGR) compare
DVU1726 +0.5 0.8 hypothetical protein (TIGR) compare
DVU3093 rdl +0.5 1.9 rubredoxin-like protein (TIGR) compare
DVU1192 acyP +0.5 1.8 acylphosphatase (TIGR) compare
DVU3329 +0.5 2.5 hypothetical protein (TIGR) compare
DORF46408 +0.5 1.8 no description compare
DVU1137 +0.5 2.3 hypothetical protein (TIGR) compare
DVU0198 +0.5 1.3 minor capsid protein C, degenerate (TIGR) compare
DVU1268 +0.5 1.7 hypothetical protein (TIGR) compare
DVU1971 +0.5 2.1 conserved domain protein (TIGR) compare
DVU1682 +0.5 1.5 GAF domain protein (TIGR) compare
DORF35977 +0.5 2.6 no description compare
DVU3289 +0.4 1.0 hypothetical protein (TIGR) compare
DVU0193 +0.4 1.6 hypothetical protein (TIGR) compare
DVU1944 oorD +0.4 0.7 pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative (TIGR) compare
DVU1389 +0.4 2.1 hypothetical protein (TIGR) compare
DVU2609 +0.4 3.0 chemotaxis MotB protein, putative (TIGR) compare
DVU1630 ptsN +0.4 0.5 PTS system, IIA component (TIGR) compare
DVU1033 cinA +0.4 0.4 competence/damage-inducible protein CinA protein, truncation (TIGR) compare
DVU1106 +0.4 1.7 hypothetical protein (TIGR) compare
DVU0747 cysA +0.4 1.1 ABC transporter, ATP-binding protein (TIGR) compare
DVU2550 +0.4 0.7 hypothetical protein (TIGR) compare
DVU1620 +0.4 0.7 hypothetical protein (TIGR) compare
DORF13021 +0.4 0.5 no description compare
DVU0660 +0.4 1.6 phosphoesterase, putative (TIGR) compare
DVU2169 +0.4 2.0 conserved hypothetical protein (TIGR) compare
DVU0202 +0.4 1.7 holin (TIGR) compare
DVU1961 cheW-3 +0.4 1.0 chemotaxis protein CheW (TIGR) compare
DVU0359 +0.4 1.7 HesB-like domain (TIGR) compare
DVU2070 +0.4 2.0 TPR domain protein (TIGR) compare
DVU1369 +0.4 0.8 hypothetical protein (TIGR) compare
DVU2300 +0.4 0.5 hypothetical protein (TIGR) compare
DVU0573 creA +0.4 1.4 creA protein (TIGR) compare
DVU0104 +0.4 2.0 cation ABC transporter, permease protein, putative (TIGR) compare
DVU2045 +0.4 1.8 hypothetical protein (TIGR) compare
DVU2510 +0.4 0.3 penicillin-binding protein (TIGR) compare
DVU0295 +0.4 2.9 amine oxidase, flavin-containing (TIGR) compare
DVU2592 +0.4 1.7 hypothetical protein (TIGR) compare
DVU2075 parA +0.4 1.0 ParA family protein (TIGR) compare
DVU2340 +0.4 1.3 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU0032 +0.4 1.2 conserved hypothetical protein (TIGR) compare
DVU1237 glnP +0.4 1.4 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU3066 +0.4 1.9 DNA-binding protein (TIGR) compare
DVU0333 +0.4 1.2 hypothetical protein (TIGR) compare
DVU0862 +0.4 2.0 flagellar protein FliS/hypothetical protein, fusion (TIGR) compare
DVU0036 +0.4 1.3 hypothetical protein (TIGR) compare
DVU0520 +0.4 2.9 flagellar hook-associated protein FlgL, putative (TIGR) compare
DVU0484 +0.4 1.7 ABC transporter, ATP-binding protein (TIGR) compare
DVU1600 +0.4 1.8 adenylate cyclase (TIGR) compare
DVU1272 gspE +0.4 2.7 general secretion pathway protein E, putative (TIGR) compare
DVU1032 +0.4 0.9 hypothetical protein (TIGR) compare
DVU2760 +0.4 1.9 hypothetical protein (TIGR) compare
DVU1445 +0.4 2.7 flagellar hook-length control domain protein (TIGR) compare
DVU1377 ilvN-2 +0.4 0.3 acetolactate synthase, small subunit (TIGR) compare
DORF37657 +0.4 0.5 SEED: Magnesium and cobalt efflux protein CorC compare
DVU0794 fabI +0.4 1.0 enoyl-(acyl-carrier-protein) reductase (TIGR) compare
DVU2099 cooC-2 +0.4 1.3 carbon monoxide dehydrogenase accessory protein CooC, putative (TIGR) compare
DVU2907 umuD +0.4 1.8 umuD protein (TIGR) compare
DORF9585 +0.4 0.4 no description compare
DVU1506 +0.4 0.7 hypothetical protein (TIGR) compare
DVU0378 +0.4 0.9 thioredoxin, putative (TIGR) compare
DVU2684 +0.3 1.3 hypothetical protein (TIGR) compare
DVU1446 +0.3 2.4 heptosyltransferase family protein (TIGR) compare
DVU0690 +0.3 1.3 conserved hypothetical protein (TIGR) compare
DVU2909 +0.3 2.5 transcriptional regulator, MarR family (TIGR) compare
DVU2881 +0.3 1.7 phage/plasmid primase, P4 family (TIGR) compare
DVU0272 +0.3 1.3 hypothetical protein (TIGR) compare
DVU1222 +0.3 2.0 hypothetical protein (TIGR) compare
DVU1708 +0.3 1.1 conserved hypothetical protein (TIGR) compare
DVU0232 +0.3 0.4 hypothetical protein (TIGR) compare
DVU0698 rfbC +0.3 1.7 dTDP-4-dehydrorhamnose 3,5-epimerase (TIGR) compare
DVU1969 +0.3 1.3 hypothetical protein (TIGR) compare
DVU0970 +0.3 1.3 lipoprotein, putative (TIGR) compare
DVU0829 ptsI +0.3 1.7 phosphoenolpyruvate-protein phosphotransferase (TIGR) compare
DORF32294 +0.3 1.1 no description compare
DVU2606 +0.3 1.3 hypothetical protein (TIGR) compare
DVUA0029 +0.3 1.2 hypothetical protein (TIGR) compare
DVU3056 +0.3 1.8 conserved hypothetical protein (TIGR) compare
DVU3309 +0.3 1.1 endo/excinuclease amino terminal domain protein (TIGR) compare
DVU2112 +0.3 1.8 hypothetical protein (TIGR) compare
DVU1557 +0.3 1.0 hypothetical protein (TIGR) compare
DVU0206 +0.3 1.0 hypothetical protein (TIGR) compare
DVU0859 +0.3 2.1 hypothetical protein (TIGR) compare
DVU2423 +0.3 2.0 transcriptional regulator, putative (TIGR) compare
DORF12455 +0.3 0.7 SEED: helix-turn-helix protein, CopG family compare
DVU1359 +0.3 2.1 hypothetical protein (TIGR) compare
DVU3302 +0.3 1.5 hypothetical protein (TIGR) compare
DVU2829 +0.3 1.6 hypothetical protein (TIGR) compare
DVU2135 +0.3 1.7 hypothetical protein (TIGR) compare
DVU2708 +0.3 1.5 virion morphogenesis protein (TIGR) compare
DVU1536 mltC +0.3 1.7 transglycosylase, SLT family (TIGR) compare
DVU2682 +0.3 0.8 DedA family protein (TIGR) compare
DVU0201 +0.3 1.3 hypothetical protein (TIGR) compare
DVU0298 +0.3 1.4 hypothetical protein (TIGR) compare
DVU3287 +0.3 2.0 glycosyl transferase, group 2 family protein (TIGR) compare
DVU0303 +0.3 1.3 hypothetical protein (TIGR) compare
DVU2539 +0.3 0.3 hypothetical protein (TIGR) compare
DVU0534 hmcC +0.3 1.8 HmcC, 43.2 kd protein in hmc operon (voordouw) compare
DVU2021 +0.3 1.0 hypothetical protein (TIGR) compare
DVU1276 +0.3 2.1 hypothetical protein (TIGR) compare
DVU0486 +0.3 1.4 hypothetical protein (TIGR) compare
DVU1964 +0.3 1.1 transcriptional regulator, rrf2 protein, putative (TIGR) compare
DORF10446 +0.3 1.8 SEED: FIG00604570: hypothetical protein compare
DVU0010 +0.3 1.1 TRAP transporter, DctQ family (TIGR) compare
DVU0001 dnaA-1 +0.3 1.0 chromosomal replication initiator protein DnaA (TIGR) compare
DVU0524 +0.3 1.2 hypothetical protein (TIGR) compare
DVU1760 +0.3 0.7 transcriptional regulator, TetR family (TIGR) compare
DORF5389 +0.3 2.1 no description compare
DVU2023 +0.3 1.7 hypothetical protein (TIGR) compare
DVU3225 +0.3 1.5 hypothetical protein (TIGR) compare
DVU0716 livF +0.3 1.6 branched-chain amino acid ABC transporter, ATP-binding protein (TIGR) compare
DVU2872 +0.3 1.7 phage portal protein, lambda family (TIGR) compare
DVU0752 +0.3 1.8 amino acid ABC transporter, amino acid-binding protein (TIGR) compare
DVU2715 +0.3 1.1 conserved hypothetical protein (TIGR) compare
DVUA0105 +0.3 1.6 conserved hypothetical protein (TIGR) compare
DVU2060 +0.3 0.7 hypothetical protein (TIGR) compare
DVU1593 cheY-1 +0.3 1.6 chemotaxis protein CheY (TIGR) compare
DVU2956 flrA +0.3 0.6 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU0197 +0.3 1.6 phage portal protein, lambda family (TIGR) compare


Specific Phenotypes

None in this experiment

For Desulfovibrio vulgaris Hildenborough JW710 in nutrient experiments

For nutrient Sodium butyrate across organisms