Experiment set14IT074 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

MoLS4 with Butyrate 10mM

200 most detrimental genes:

  gene name fitness t score description  
DVU0603 +1.2 2.4 hypothetical protein (TIGR) compare
DVU0043 fliQ +1.1 7.8 flagellar biosynthetic protein FliQ (TIGR) compare
DVU2703 +1.1 1.3 hypothetical protein (TIGR) compare
DVU2048 +1.1 0.7 hypothetical protein (TIGR) compare
DVU0802 +1.0 1.0 hypothetical protein (TIGR) compare
DORF8192 +1.0 4.8 SEED: FIG00606834: hypothetical protein compare
DORF13021 +1.0 1.9 no description compare
DVU0515 flgH +0.9 6.6 flagellar L-ring protein FlgH (TIGR) compare
DVU0046 fliN +0.9 6.5 flagellar motor switch protein FliN (TIGR) compare
DVU2044 +0.9 1.4 hypothetical protein (TIGR) compare
DVU1748 +0.9 0.7 conserved hypothetical protein (TIGR) compare
DVU0310 fliI +0.9 6.3 flagellum-specific ATP synthase FliI (TIGR) compare
DVU2631 +0.9 1.9 hypothetical protein (TIGR) compare
DVU0516 flgI +0.9 6.7 flagellar P-ring protein FlgI (TIGR) compare
DVU0314 fliE +0.8 5.3 flagellar basal body component FliE (TIGR) compare
DVU0793 +0.8 2.1 hypothetical protein (TIGR) compare
DVU1363 rfbD +0.8 4.3 dTDP-4-dehydrorhamnose reductase (TIGR) compare
DVU3233 flhB +0.8 6.3 flagellar biosynthetic protein FlhB (TIGR) compare
DVU0512 flgF +0.8 5.6 flagellar basal-body rod protein, putative (TIGR) compare
DVU2669 +0.8 2.8 conserved domain protein (TIGR) compare
DVU0311 +0.8 4.3 flagellar assembly protein FliH, putative (TIGR) compare
DVU0045 +0.8 4.8 flagellar biosynthesis protein, FliO, putative (TIGR) compare
DVU3234 +0.8 5.4 flagellar biosynthetic protein FliR (TIGR) compare
DVU0307 +0.8 6.6 flagella basal body rod domain protein (TIGR) compare
DVU0514 +0.8 5.1 FlgA family protein (TIGR) compare
DVU0315 flgC +0.8 5.0 flagellar basal-body rod protein FlgC (TIGR) compare
DVU2896 +0.8 6.2 TPR domain protein (TIGR) compare
DVU3232 flhA +0.8 6.6 flagellar biosynthetic protein FlhA (TIGR) compare
DVU0312 fliG +0.8 4.8 flagellar motor switch protein FliG (TIGR) compare
DORF46408 +0.8 1.3 no description compare
DVU2867 +0.8 1.2 holin (TIGR) compare
DVU1859 +0.8 1.1 hypothetical protein (TIGR) compare
DVU0910 fliM +0.8 4.2 flagellar motor switch protein FliM (TIGR) compare
DVU3227 +0.8 4.8 flagellar basal body-associated protein, putative (TIGR) compare
DVU1862 +0.7 4.1 GGDEF domain protein (TIGR) compare
DVU0518 +0.7 5.5 hypothetical protein (TIGR) compare
DVU0044 fliP +0.7 3.7 flagellar biosynthetic protein fliP (TIGR) compare
DVU1444 flgD +0.7 4.7 basal-body rod modification protein FlgD (TIGR) compare
DVU0513 flgG +0.7 4.7 flagellar basal-body rod protein FlgG (TIGR) compare
DVU0519 +0.7 5.8 flagellar hook-associated protein FlgK, putative (TIGR) compare
DVU0410 +0.7 4.3 hypothetical protein (TIGR) compare
DVU0420 +0.7 0.9 hypothetical protein (TIGR) compare
DVU3215 drrA +0.7 1.1 response regulator (TIGR) compare
DVU0989 +0.7 3.3 periplasmic divalent cation tolerance protein cutA, putative (TIGR) compare
DVU1420 +0.7 1.1 Hpt domain protein (TIGR) compare
DVU2864 +0.7 1.7 hypothetical protein (TIGR) compare
DVU2877 +0.7 3.8 hypothetical protein (TIGR) compare
DVU0830 ptsH +0.6 1.0 phosphocarrier protein HPr (TIGR) compare
DVU1577 hslV +0.6 1.6 ATP-dependent protease hslV (TIGR) compare
DVU1726 +0.6 1.0 hypothetical protein (TIGR) compare
DVU1520 +0.6 0.5 hypothetical protein (TIGR) compare
DVU0313 fliF +0.6 4.7 flagellar M-ring protein FliF (TIGR) compare
DVU1465 +0.6 4.6 CgeB family protein (TIGR) compare
DVU2894 flrA +0.6 4.0 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU0747 cysA +0.6 1.8 ABC transporter, ATP-binding protein (TIGR) compare
DVU2007 +0.6 1.4 nuclease, putative (TIGR) compare
DVU1464 +0.6 4.6 heptosyltransferase family protein (TIGR) compare
DVU0912 +0.6 2.4 conserved domain protein (TIGR) compare
DVU1844 +0.6 0.4 septum formation initiator family protein (TIGR) compare
DVU0858 +0.6 3.1 lipoprotein, putative (TIGR) compare
DVU2391 +0.6 0.5 hypothetical protein (TIGR) compare
DVU0376 +0.6 0.6 hypothetical protein (TIGR) compare
DVU0764 hup-2 +0.5 2.5 DNA-binding protein HU (TIGR) compare
DVU2217 +0.5 2.4 acetyltransferase, GNAT family (TIGR) compare
DVU0034 +0.5 3.2 DSBA-like thioredoxin domain protein (TIGR) compare
DVU2421 dmpI +0.5 2.1 4-oxalocrotonate tautomerase family protein (TIGR) compare
DVU1679 idi +0.5 1.3 isopentenyl-diphosphate delta-isomerase (TIGR) compare
DVU1863 +0.5 2.8 flagellar synthesis regulator FleN, putative (TIGR) compare
DVU1045 +0.5 2.6 hypothetical protein (TIGR) compare
DVU1347 +0.5 1.7 peptidase, M23/M37 family (TIGR) compare
DVU2212 +0.5 2.0 conserved hypothetical protein (TIGR) compare
DVU3177 +0.5 3.7 hypothetical protein (TIGR) compare
DVU1035 glk +0.5 2.1 glucokinase, putative (TIGR) compare
DVU1237 glnP +0.5 1.3 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) compare
DVU2871 +0.5 2.1 minor capsid protein C (TIGR) compare
DVU2021 +0.5 2.4 hypothetical protein (TIGR) compare
DVU0193 +0.5 2.2 hypothetical protein (TIGR) compare
DVU0863 +0.5 4.1 flagellar hook-associated protein 2, putative (TIGR) compare
DVU2045 +0.5 2.3 hypothetical protein (TIGR) compare
DVU0909 +0.5 1.8 hypothetical protein (TIGR) compare
DVU0862 +0.5 2.3 flagellar protein FliS/hypothetical protein, fusion (TIGR) compare
DVU2946 +0.5 1.1 hypothetical protein (TIGR) compare
DVU3175 +0.5 1.0 membrane protein, putative (TIGR) compare
DVU1443 flgE +0.5 2.2 flagellar hook protein FlgE (TIGR) compare
DVU0200 +0.5 0.9 major head protein (TIGR) compare
DVU1908 pdxJ +0.5 0.8 pyridoxal phosphate biosynthetic protein PdxJ (TIGR) compare
DVU0520 +0.5 3.5 flagellar hook-associated protein FlgL, putative (TIGR) compare
DVU0698 rfbC +0.5 2.9 dTDP-4-dehydrorhamnose 3,5-epimerase (TIGR) compare
DVU2325 merP +0.5 0.8 mercuric transport protein periplasmic component (TIGR) compare
DVU1506 +0.5 1.0 hypothetical protein (TIGR) compare
DVU1567 +0.5 2.0 hypothetical protein (TIGR) compare
DVU2169 +0.5 2.2 conserved hypothetical protein (TIGR) compare
DVU0859 +0.5 3.3 hypothetical protein (TIGR) compare
DVU1708 +0.5 2.0 conserved hypothetical protein (TIGR) compare
DVU3339.1 kdpF +0.5 2.0 potassium-transporting ATPase, KdpF subunit (TIGR) compare
DVU3329 +0.5 3.2 hypothetical protein (TIGR) compare
DVUA0081 +0.5 0.9 glycosyl transferase, group 1/2 family protein (TIGR) compare
DVU2362 thiE-2 +0.4 0.9 thiamine-phosphate pyrophosphorylase (TIGR) compare
DORF12461 +0.4 0.9 SEED: HigA protein (antitoxin to HigB) compare
DVU0833 +0.4 2.3 conserved hypothetical protein TIGR00252 (TIGR) compare
DVU0787 +0.4 1.1 hypothetical protein (TIGR) compare
DVU3287 +0.4 3.5 glycosyl transferase, group 2 family protein (TIGR) compare
DVU0280 wbaZ-2 +0.4 1.3 glycosyl transferase, group 1 family protein (TIGR) compare
DVU2473 +0.4 0.3 hypothetical protein (TIGR) compare
DVU2166 +0.4 1.3 holin (TIGR) compare
DVU3357 +0.4 1.4 hypothetical protein (TIGR) compare
DVU2847 +0.4 1.9 hypothetical protein (TIGR) compare
DVU2608 motA-3 +0.4 2.9 chemotaxis protein MotA (TIGR) compare
DVU1475 +0.4 1.2 PhoU family protein (TIGR) compare
DVU0204 +0.4 1.3 lipoprotein, putative (TIGR) compare
DVU1263 pppA +0.4 1.9 type IV prepilin-like proteins leader peptidase (TIGR) compare
DVU1375 +0.4 1.4 hypothetical protein (TIGR) compare
DVU1549 +0.4 2.5 conserved hypothetical protein (TIGR) compare
DVU1192 acyP +0.4 1.0 acylphosphatase (TIGR) compare
DVU1251 +0.4 0.8 hypothetical protein (TIGR) compare
DVU2418 +0.4 1.9 vanZ-like family protein (TIGR) compare
DVU1497 +0.4 1.3 head-tail adaptor, putative (TIGR) compare
DVU2120 +0.4 1.0 hypothetical protein (TIGR) compare
DVU0987 +0.4 1.0 heavy metal-binding domain protein (TIGR) compare
DVU2257 +0.4 2.0 hypothetical protein (TIGR) compare
DVU0033 +0.4 1.9 isochorismatase family protein (TIGR) compare
DVU0499 +0.4 1.1 conserved hypothetical protein TIGR00149 (TIGR) compare
DVU1704 +0.4 0.4 conserved hypothetical protein (TIGR) compare
DVU1221 +0.4 0.5 hypothetical protein (TIGR) compare
DVU0304 +0.4 2.0 hypothetical protein (TIGR) compare
DORF35977 +0.4 2.5 no description compare
DVU2060 +0.4 1.1 hypothetical protein (TIGR) compare
DVU0442 +0.4 2.8 phoH-related protein (TIGR) compare
DVU2200 +0.4 0.4 hypothetical protein (TIGR) compare
DVU1682 +0.4 1.2 GAF domain protein (TIGR) compare
DVU2592 +0.4 1.1 hypothetical protein (TIGR) compare
DVU1071 +0.4 2.6 hypothetical protein (TIGR) compare
DVU1294 +0.4 1.7 conserved hypothetical protein (TIGR) compare
DVU0008 +0.4 0.3 hypothetical protein (TIGR) compare
DVU1593 cheY-1 +0.4 1.9 chemotaxis protein CheY (TIGR) compare
DVU1646 arsC +0.4 1.3 arsenate reductase (TIGR) compare
DVU3387 +0.4 2.8 hypothetical protein (TIGR) compare
DVU0486 +0.4 1.6 hypothetical protein (TIGR) compare
DVU1106 +0.4 1.6 hypothetical protein (TIGR) compare
DVU0939 +0.4 2.8 conserved hypothetical protein (TIGR) compare
DVU1225 +0.4 0.5 hypothetical protein (TIGR) compare
DVU2112 +0.4 3.0 hypothetical protein (TIGR) compare
DVU2885 dhaT +0.4 2.4 alcohol dehydrogenase, iron-containing (TIGR) compare
DVU1001 b0965 +0.4 2.2 coenzyme A binding protein (TIGR) compare
DVU3260 +0.4 1.5 hypothetical protein (TIGR) compare
DVU0640 pomA +0.4 2.3 chemotaxis protein PomA (TIGR) compare
DVU1276 +0.4 2.8 hypothetical protein (TIGR) compare
DVU2419 +0.4 1.9 conserved domain protein (TIGR) compare
DVU2513 mraZ +0.4 1.0 conserved hypothetical protein TIGR00242 (TIGR) compare
DVU0146 +0.4 1.9 hypothetical protein (TIGR) compare
DVU0612 +0.4 1.9 STAS domain protein (TIGR) compare
DORF28817 +0.4 0.8 no description compare
DVU2697 +0.4 0.8 hypothetical protein (TIGR) compare
DVU0047 +0.4 1.7 flagellar protein FliL (TIGR) compare
DORF19331 +0.4 1.6 no description compare
DVU2023 +0.4 2.3 hypothetical protein (TIGR) compare
DORF14650 +0.4 1.4 no description compare
DVU2909 +0.4 2.9 transcriptional regulator, MarR family (TIGR) compare
DVU3139 +0.4 1.1 bacterial extracellular solute-binding protein, family 3 (TIGR) compare
DVU2137 sucCD +0.4 1.7 succinyl-CoA synthetase, alpha/beta subunit (sucCD) (Chris Hemme) compare
DVU0221 +0.4 1.9 tail fiber assembly protein, putative (TIGR) compare
DVU0295 +0.4 2.8 amine oxidase, flavin-containing (TIGR) compare
DORF41147 +0.4 0.5 no description compare
DVU2198 +0.4 0.3 hypothetical protein (TIGR) compare
DVU0274 +0.4 2.2 hypothetical protein (TIGR) compare
DVU2498 +0.4 1.4 hypothetical protein (TIGR) compare
DVU0215 +0.4 1.6 tail protein, putative (TIGR) compare
DVU3229 fliA +0.4 2.1 RNA polymerase sigma factor for flagellar operon FliA (TIGR) compare
DVU0333 +0.4 1.1 hypothetical protein (TIGR) compare
DVU2695 +0.4 1.4 conserved hypothetical protein (TIGR) compare
DVU2843 vsr +0.4 2.9 DNA mismatch endonuclease Vsr, putative (TIGR) compare
DVU3065 +0.4 2.6 AMP-binding enzyme family protein (TIGR) compare
DVU0913 +0.4 1.5 conserved hypothetical protein (TIGR) compare
DVU1961 cheW-3 +0.4 0.8 chemotaxis protein CheW (TIGR) compare
DVU2326 +0.4 2.7 conserved domain protein (TIGR) compare
DVU2684 +0.4 0.7 hypothetical protein (TIGR) compare
DVU2170 +0.4 2.1 minor capsid protein C (TIGR) compare
DVU2323 +0.4 1.0 hypothetical protein (TIGR) compare
DVU0198 +0.4 1.6 minor capsid protein C, degenerate (TIGR) compare
DVU2115 +0.4 0.6 hypothetical protein (TIGR) compare
DVU1272 gspE +0.4 2.6 general secretion pathway protein E, putative (TIGR) compare
DVU0378 +0.4 1.2 thioredoxin, putative (TIGR) compare
DVU1964 +0.4 1.2 transcriptional regulator, rrf2 protein, putative (TIGR) compare
DVU1063 flrC +0.4 1.7 transcriptional regulatory protein (TIGR) compare
DVU0829 ptsI +0.3 1.7 phosphoenolpyruvate-protein phosphotransferase (TIGR) compare
DVU0572 +0.3 2.4 hypothetical protein (TIGR) compare
DVU1458 +0.3 2.3 chemotaxis protein CheZ, putative (TIGR) compare
DVU2619 +0.3 1.1 conserved hypothetical protein (TIGR) compare
DVU2818 +0.3 1.7 hypothetical protein (TIGR) compare
DVU1620 +0.3 0.5 hypothetical protein (TIGR) compare
DVU3343 +0.3 1.4 hypothetical protein (TIGR) compare
DVU2062 +0.3 0.9 ATP-dependent DNA helicase, UvrD/REP family (TIGR) compare
DVUA0116 +0.3 2.2 conserved hypothetical protein (TIGR) compare
DVU2607 +0.3 1.3 hypothetical protein (TIGR) compare
DVU1838 trxB-2 +0.3 0.6 thioredoxin reductase (TIGR) compare
DVU3123 +0.3 1.3 HD domain protein (TIGR) compare
DVU2203 +0.3 0.7 endoribonuclease, L-PSP family (TIGR) compare
DVU2881 +0.3 1.2 phage/plasmid primase, P4 family (TIGR) compare
DVU1384 pyrR +0.3 1.2 pyrimidine operon regulatory protein (TIGR) compare
DVU2915 +0.3 1.8 hypothetical protein (TIGR) compare


Specific Phenotypes

None in this experiment

For Desulfovibrio vulgaris Hildenborough JW710 in nutrient experiments

For nutrient Sodium butyrate across organisms