Experiment set14IT073 for Pseudomonas fluorescens FW300-N2E2

Compare to:

50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine dihydrochloride

Genes with specific phenotypes:

  gene name fitness t score description  
Pf6N2E2_4509 -3.9 -15.1 Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) (from data) conserved
Pf6N2E2_4512 -2.8 -13.8 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) (from data) conserved
Pf6N2E2_4513 -2.7 -10.4 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) compare
Pf6N2E2_80 -2.6 -8.8 gamma-glutamylputrescine oxidase (EC 1.4.3.-) (from data) conserved
Pf6N2E2_4514 -2.3 -7.8 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) conserved
Pf6N2E2_4800 -2.2 -13.6 yeaH component of nitrogen-related signalling system yeaH (of yeaGH-ycgB) (from data) compare
Pf6N2E2_4390 -2.0 -10.6 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system compare
Pf6N2E2_4799 -2.0 -12.9 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare
Pf6N2E2_4801 -1.9 -13.2 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) compare
Pf6N2E2_2466 -1.6 -7.8 Universal stress protein family compare
Pf6N2E2_5012 -1.3 -5.0 FIG00954871: hypothetical protein conserved
Pf6N2E2_5734 -1.3 -6.0 NLP/P60 family protein compare
Pf6N2E2_3393 -1.3 -5.4 Queuosine Biosynthesis QueC ATPase compare
Pf6N2E2_4271 -1.2 -5.4 FIG00956226: hypothetical protein compare
Pf6N2E2_5396 +1.0 7.1 YheO-like PAS domain compare
Pf6N2E2_4435 +1.4 9.4 Regulator of sigma D conserved
Pf6N2E2_2699 +1.5 10.4 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO compare
Pf6N2E2_2979 +1.7 7.5 Histone acetyltransferase HPA2 and related acetyltransferases conserved
Pf6N2E2_5403 +2.6 19.4 ABC transporter for D-Alanine, permease component 2 (from data) compare
Pf6N2E2_5405 +2.6 14.2 ABC transporter for D-Alanine, ATPase component (from data) compare
Pf6N2E2_5404 +2.7 18.0 ABC transporter for D-Alanine, permease component 1 (from data) compare
Pf6N2E2_5402 +2.8 18.2 ABC transporter for D-Alanine, periplasmic substrate-binding component (from data) compare


Specific phenotypes for resistance P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine dihydrochloride across organisms