Experiment set14IT072 for Klebsiella michiganensis M5al

Compare to:

LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL

200 most important genes:

  gene name fitness t score description  
BWI76_RS17975 -5.3 -3.2 tail-specific protease compare
BWI76_RS05120 -5.0 -4.9 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS21660 -4.8 -1.2 antirestriction protein compare
BWI76_RS16965 -4.7 -1.7 murein lipoprotein compare
BWI76_RS01095 -4.6 -2.1 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS01115 -4.6 -2.0 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS21310 -4.4 -1.2 DNA repair protein RecO compare
BWI76_RS26460 -4.4 -3.0 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS26455 -4.4 -1.6 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS05260 -4.4 -1.1 chaperone compare
BWI76_RS26665 -4.3 -2.4 DNA-binding response regulator compare
BWI76_RS26440 -4.2 -1.1 hypothetical protein compare
BWI76_RS26670 -4.2 -6.9 two-component sensor histidine kinase compare
BWI76_RS00875 -4.1 -4.0 DNA-binding transcriptional regulator FabR compare
BWI76_RS23265 -4.0 -1.5 hypothetical protein compare
BWI76_RS04305 -4.0 -1.0 molecular chaperone DnaJ compare
BWI76_RS08520 -4.0 -1.8 colicin transporter TolQ compare
BWI76_RS01630 -4.0 -1.0 16S ribosomal RNA compare
BWI76_RS23365 -3.9 -3.6 LysR family transcriptional regulator compare
BWI76_RS21345 -3.8 -1.6 sigma-E factor regulatory protein RseB compare
BWI76_RS19905 -3.7 -5.0 OmpK36 porin compare
BWI76_RS21450 -3.6 -1.8 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS08020 -3.5 -5.0 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS05015 -3.5 -1.8 transcriptional regulator compare
BWI76_RS10935 -3.5 -3.9 glucan biosynthesis glucosyltransferase H compare
BWI76_RS21070 -3.4 -1.5 outer membrane protein assembly factor BamB compare
BWI76_RS01090 -3.4 -4.5 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS11155 -3.4 -2.1 penicillin-binding protein activator LpoB compare
BWI76_RS21235 -3.4 -0.9 hypothetical protein compare
BWI76_RS01080 -3.4 -9.1 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS19770 -3.3 -1.2 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS25335 -3.3 -1.5 stringent starvation protein A compare
BWI76_RS22935 -3.3 -1.7 L-fucose mutarotase compare
BWI76_RS25600 -3.2 -0.8 tRNA-Thr compare
BWI76_RS05075 -3.2 -0.8 type II secretion system protein GspG compare
BWI76_RS20360 -3.1 -0.8 cell division protein DedD compare
BWI76_RS04160 -3.1 -2.7 phosphoserine phosphatase compare
BWI76_RS05915 -3.0 -2.8 helix-turn-helix transcriptional regulator compare
BWI76_RS21350 -3.0 -2.5 anti-RNA polymerase sigma factor SigE compare
BWI76_RS08525 -2.9 -1.2 colicin transporter compare
BWI76_RS12145 -2.9 -1.9 hypothetical protein compare
BWI76_RS07465 -2.9 -1.0 TetR family transcriptional regulator compare
BWI76_RS06525 -2.9 -3.4 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS27425 -2.9 -1.3 DNA-directed RNA polymerase subunit omega compare
BWI76_RS20145 -2.9 -1.3 NADH-quinone oxidoreductase subunit K compare
BWI76_RS25960 -2.8 -3.2 NUDIX hydrolase compare
BWI76_RS14050 -2.8 -2.1 AP endonuclease, family 2 compare
BWI76_RS21075 -2.8 -1.2 membrane protein compare
BWI76_RS22755 -2.8 -3.8 phosphoadenosine phosphosulfate reductase compare
BWI76_RS25070 -2.7 -1.2 hypothetical protein compare
BWI76_RS27780 -2.7 -1.3 hypothetical protein compare
BWI76_RS15825 -2.7 -0.9 hypothetical protein compare
BWI76_RS01350 -2.7 -0.7 NAD(P)H-flavin reductase compare
BWI76_RS04715 -2.7 -1.3 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS23920 -2.6 -2.0 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS08210 -2.6 -0.9 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS25060 -2.6 -4.8 lipoprotein NlpI compare
BWI76_RS17980 -2.6 -2.6 RNA chaperone ProQ compare
BWI76_RS08535 -2.5 -1.1 translocation protein TolB compare
BWI76_RS21685 -2.5 -0.9 hypothetical protein compare
BWI76_RS09645 -2.5 -0.6 thioredoxin-disulfide reductase compare
BWI76_RS25285 -2.5 -0.9 HPr family phosphocarrier protein compare
BWI76_RS05835 -2.5 -1.6 gamma-glutamyl-phosphate reductase compare
BWI76_RS16955 -2.4 -0.9 hypothetical protein compare
BWI76_RS09195 -2.4 -0.9 N-acetyltransferase compare
BWI76_RS23830 -2.4 -4.3 hypothetical protein compare
BWI76_RS06535 -2.4 -2.3 endopeptidase La compare
BWI76_RS19920 -2.4 -8.4 hybrid sensor histidine kinase/response regulator compare
BWI76_RS07820 -2.3 -1.6 S-methyl-5-thioribose kinase compare
BWI76_RS22090 -2.3 -1.6 transcriptional regulator compare
BWI76_RS01135 -2.3 -3.2 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS15850 -2.3 -1.9 DUF1317 domain-containing protein compare
BWI76_RS21340 -2.3 -1.6 SoxR reducing system protein RseC compare
BWI76_RS21370 -2.3 -0.8 ATP-dependent RNA helicase SrmB compare
BWI76_RS18470 -2.3 -2.1 hypothetical protein compare
BWI76_RS01125 -2.3 -4.7 4-alpha-L-fucosyltransferase compare
BWI76_RS13920 -2.3 -6.1 magnesium-translocating P-type ATPase compare
BWI76_RS01800 -2.3 -2.0 glucose-6-phosphate isomerase compare
BWI76_RS03665 -2.3 -1.7 ABC transporter ATP-binding protein compare
BWI76_RS09970 -2.3 -0.8 porin OmpA compare
BWI76_RS08605 -2.3 -1.6 phosphoglyceromutase compare
BWI76_RS14320 -2.3 -1.8 hypothetical protein compare
BWI76_RS06475 -2.3 -1.1 protoheme IX farnesyltransferase compare
BWI76_RS01110 -2.2 -3.2 TDP-fucosamine acetyltransferase compare
BWI76_RS00240 -2.2 -1.1 FMN-binding protein MioC compare
BWI76_RS27165 -2.2 -3.5 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS06680 -2.1 -0.9 hypothetical protein compare
BWI76_RS09755 -2.1 -2.8 phosphoserine transaminase compare
BWI76_RS25680 -2.1 -3.6 16S rRNA m5C967 methyltransferase compare
BWI76_RS15760 -2.1 -1.5 hypothetical protein compare
BWI76_RS09760 -2.1 -2.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS08530 -2.1 -1.3 protein TolA compare
BWI76_RS20440 -2.1 -2.7 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS05350 -2.1 -6.1 Rcs stress response system protein RcsF compare
BWI76_RS19330 -2.1 -0.7 HAD family hydrolase compare
BWI76_RS04270 -2.1 -3.0 transaldolase compare
BWI76_RS19910 -2.0 -5.9 phosphotransferase RcsD compare
BWI76_RS19685 -2.0 -4.1 lysine transporter compare
BWI76_RS04100 -2.0 -2.6 peptide chain release factor 3 compare
BWI76_RS08385 -2.0 -2.3 citrate (Si)-synthase compare
BWI76_RS24605 -2.0 -4.3 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS25065 -2.0 -3.4 polyribonucleotide nucleotidyltransferase compare
BWI76_RS24910 -2.0 -4.5 rRNA (cytidine-2'-O-)-methyltransferase compare
BWI76_RS18410 -2.0 -2.6 drug/metabolite exporter YedA compare
BWI76_RS18000 -2.0 -3.6 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF compare
BWI76_RS19840 -2.0 -0.5 hypothetical protein compare
BWI76_RS09730 -1.9 -0.7 pyruvate formate lyase 1-activating protein compare
BWI76_RS09670 -1.9 -1.5 recombination factor protein RarA compare
BWI76_RS11190 -1.9 -2.0 putative TetR/AcrR family transcriptional regulatory protein compare
BWI76_RS00720 -1.9 -1.2 DNA-binding response regulator compare
BWI76_RS02735 -1.9 -1.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS11635 -1.8 -0.9 ABC transporter compare
BWI76_RS08040 -1.8 -1.5 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS02780 -1.8 -9.0 translocation and assembly module TamB compare
BWI76_RS02530 -1.8 -1.0 tRNA dimethylallyltransferase compare
BWI76_RS09025 -1.8 -1.8 GntR family transcriptional regulator compare
BWI76_RS27915 -1.8 -1.4 YceK/YidQ family lipoprotein compare
BWI76_RS25700 -1.7 -3.6 heavy metal-responsive transcriptional regulator compare
BWI76_RS00345 -1.7 -3.1 protein disulfide oxidoreductase DsbA compare
BWI76_RS09470 -1.7 -1.8 putrescine ABC transporter permease compare
BWI76_RS19055 -1.7 -9.0 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS23820 -1.7 -2.8 flavodoxin FldB compare
BWI76_RS10930 -1.7 -6.0 glucan biosynthesis protein G compare
BWI76_RS03080 -1.7 -3.2 (Fe-S)-cluster assembly protein compare
BWI76_RS18885 -1.7 -2.3 nitrogen fixation regulatory protein compare
BWI76_RS02775 -1.7 -2.5 outer membrane protein assembly factor compare
BWI76_RS24080 -1.7 -1.4 DUF179 domain-containing protein compare
BWI76_RS16360 -1.6 -0.8 electron transport complex subunit RsxB compare
BWI76_RS13820 -1.6 -1.5 hypothetical protein compare
BWI76_RS21795 -1.6 -2.9 EAL domain-containing protein compare
BWI76_RS20170 -1.6 -3.1 NADH-quinone oxidoreductase subunit F compare
BWI76_RS26890 -1.6 -1.1 hypothetical protein compare
BWI76_RS15845 -1.6 -0.8 hypothetical protein compare
BWI76_RS22645 -1.6 -4.7 RNA polymerase sigma factor RpoS compare
BWI76_RS07115 -1.6 -3.6 hypothetical protein compare
BWI76_RS10990 -1.6 -2.2 dihydroorotase compare
BWI76_RS11275 -1.6 -3.2 sensor protein PhoQ compare
BWI76_RS11300 -1.6 -0.7 cupin compare
BWI76_RS26775 -1.5 -3.8 endo-1,4-D-glucanase compare
BWI76_RS11610 -1.5 -1.3 glutamate dehydrogenase compare
BWI76_RS16895 -1.5 -0.9 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS01870 -1.5 -2.3 diacylglycerol kinase compare
BWI76_RS02610 -1.5 -4.1 transcriptional regulator compare
BWI76_RS22690 -1.5 -1.8 adenylyl-sulfate kinase compare
BWI76_RS25920 -1.5 -1.0 peptidylprolyl isomerase compare
BWI76_RS24600 -1.5 -1.5 dihydroxyacetone kinase compare
BWI76_RS07785 -1.5 -1.1 transcriptional regulator compare
BWI76_RS23515 -1.5 -1.9 antibiotic biosynthesis monooxygenase compare
BWI76_RS17045 -1.5 -1.1 hypothetical protein compare
BWI76_RS16425 -1.5 -1.4 hypothetical protein compare
BWI76_RS20720 -1.5 -1.1 hypothetical protein compare
BWI76_RS24750 -1.5 -3.7 membrane protein compare
BWI76_RS26425 -1.5 -3.4 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS15110 -1.5 -3.4 putative excinuclease ABC subunit A compare
BWI76_RS06250 -1.5 -2.4 alpha-glycosidase compare
BWI76_RS26095 -1.5 -0.5 shikimate kinase compare
BWI76_RS21675 -1.5 -0.5 hypothetical protein compare
BWI76_RS19375 -1.5 -1.0 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS01220 -1.5 -3.4 DNA-dependent helicase II compare
BWI76_RS23825 -1.5 -5.0 hypothetical protein compare
BWI76_RS00355 -1.4 -0.6 DNA polymerase I compare
BWI76_RS15115 -1.4 -1.4 MFS transporter compare
BWI76_RS26395 -1.4 -3.9 cell division protein FtsE compare
BWI76_RS15740 -1.4 -1.6 HNH endonuclease compare
BWI76_RS13595 -1.4 -3.1 transcriptional regulator compare
BWI76_RS26200 -1.4 -4.3 starch synthase compare
BWI76_RS13050 -1.4 -1.4 transcriptional regulator compare
BWI76_RS23330 -1.4 -3.1 transcriptional regulator GalR compare
BWI76_RS04470 -1.4 -4.6 carbamoyl phosphate synthase large subunit compare
BWI76_RS07740 -1.4 -0.8 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS27440 -1.4 -0.9 DNA helicase RecG compare
BWI76_RS11170 -1.4 -0.8 hypothetical protein compare
BWI76_RS17530 -1.4 -2.4 hypothetical protein compare
BWI76_RS24850 -1.4 -3.7 DeoR family transcriptional regulator compare
BWI76_RS16275 -1.4 -2.0 fumarate hydratase FumA compare
BWI76_RS04060 -1.4 -1.3 hypothetical protein compare
BWI76_RS17720 -1.4 -0.3 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS08190 -1.4 -7.2 MFS transporter compare
BWI76_RS24340 -1.4 -3.2 two-component sensor histidine kinase compare
BWI76_RS10245 -1.4 -1.7 aspartate aminotransferase compare
BWI76_RS11580 -1.4 -1.6 L-asparaginase 1 compare
BWI76_RS13755 -1.4 -1.2 hypothetical protein compare
BWI76_RS12870 -1.3 -1.1 putative phytanoyl-CoA dioxygenase compare
BWI76_RS18915 -1.3 -1.9 NAD(P)-dependent oxidoreductase compare
BWI76_RS16200 -1.3 -0.9 NAD(P) transhydrogenase subunit beta compare
BWI76_RS05450 -1.3 -0.5 ribonuclease HI compare
BWI76_RS09315 -1.3 -1.5 hypothetical protein compare
BWI76_RS22765 -1.3 -4.6 sulfite reductase subunit alpha compare
BWI76_RS11200 -1.3 -2.2 transpeptidase compare
BWI76_RS19885 -1.3 -2.9 multidrug ABC transporter permease/ATP-binding protein compare
BWI76_RS02745 -1.3 -0.7 hypothetical protein compare
BWI76_RS07185 -1.3 -0.7 hypothetical protein compare
BWI76_RS06395 -1.3 -2.1 tRNA 4-thiouridine(8) synthase ThiI compare
BWI76_RS12150 -1.3 -2.7 DNA damage-inducible protein I compare
BWI76_RS15840 -1.3 -2.1 prophage protein compare
BWI76_RS21690 -1.3 -1.0 hypothetical protein compare
BWI76_RS10625 -1.3 -5.0 hypothetical protein compare
BWI76_RS19040 -1.3 -3.8 hypothetical protein compare
BWI76_RS20150 -1.3 -1.3 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS20755 -1.3 -2.4 microcompartment protein EutL compare


Specific Phenotypes

For 1 genes in this experiment

For mixed community Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL in Klebsiella michiganensis M5al

For mixed community Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL across organisms