Experiment set14IT071 for Klebsiella michiganensis M5al

Compare to:

LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL

200 most important genes:

  gene name fitness t score description  
BWI76_RS16965 -5.0 -2.2 murein lipoprotein compare
BWI76_RS17975 -4.7 -5.4 tail-specific protease compare
BWI76_RS26460 -4.7 -3.2 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS05260 -4.6 -1.5 chaperone compare
BWI76_RS08520 -4.3 -2.3 colicin transporter TolQ compare
BWI76_RS23265 -4.2 -1.9 hypothetical protein compare
BWI76_RS21350 -4.1 -4.0 anti-RNA polymerase sigma factor SigE compare
BWI76_RS26455 -4.0 -2.5 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS11155 -3.9 -2.3 penicillin-binding protein activator LpoB compare
BWI76_RS26665 -3.8 -4.4 DNA-binding response regulator compare
BWI76_RS01080 -3.7 -8.9 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS01095 -3.7 -2.7 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS05120 -3.7 -8.1 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS08530 -3.6 -1.6 protein TolA compare
BWI76_RS19770 -3.4 -1.5 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS06520 -3.4 -5.1 trigger factor compare
BWI76_RS04715 -3.4 -1.4 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS01090 -3.4 -5.4 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS20360 -3.3 -1.0 cell division protein DedD compare
BWI76_RS26670 -3.2 -5.8 two-component sensor histidine kinase compare
BWI76_RS08525 -3.2 -1.6 colicin transporter compare
BWI76_RS01110 -3.2 -5.3 TDP-fucosamine acetyltransferase compare
BWI76_RS07465 -3.1 -1.3 TetR family transcriptional regulator compare
BWI76_RS06680 -3.0 -1.3 hypothetical protein compare
BWI76_RS19905 -3.0 -4.8 OmpK36 porin compare
BWI76_RS25960 -3.0 -3.9 NUDIX hydrolase compare
BWI76_RS26730 -2.9 -7.2 inner membrane protein YhjD compare
BWI76_RS08535 -2.8 -1.5 translocation protein TolB compare
BWI76_RS01135 -2.8 -4.7 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS08210 -2.8 -1.2 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS21580 -2.8 -1.5 SsrA-binding protein compare
BWI76_RS02780 -2.7 -12.7 translocation and assembly module TamB compare
BWI76_RS09645 -2.7 -0.8 thioredoxin-disulfide reductase compare
BWI76_RS21310 -2.7 -1.4 DNA repair protein RecO compare
BWI76_RS17980 -2.7 -4.7 RNA chaperone ProQ compare
BWI76_RS08020 -2.7 -7.2 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS13820 -2.7 -1.8 hypothetical protein compare
BWI76_RS06535 -2.6 -2.5 endopeptidase La compare
BWI76_RS08040 -2.6 -2.3 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS13755 -2.6 -1.8 hypothetical protein compare
BWI76_RS20380 -2.6 -0.8 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS21345 -2.6 -2.2 sigma-E factor regulatory protein RseB compare
BWI76_RS01800 -2.6 -2.5 glucose-6-phosphate isomerase compare
BWI76_RS02775 -2.5 -5.5 outer membrane protein assembly factor compare
BWI76_RS01870 -2.5 -4.1 diacylglycerol kinase compare
BWI76_RS21075 -2.5 -1.9 membrane protein compare
BWI76_RS21370 -2.5 -1.0 ATP-dependent RNA helicase SrmB compare
BWI76_RS21070 -2.5 -1.8 outer membrane protein assembly factor BamB compare
BWI76_RS11275 -2.4 -8.3 sensor protein PhoQ compare
BWI76_RS00240 -2.4 -1.5 FMN-binding protein MioC compare
BWI76_RS09760 -2.4 -3.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS09970 -2.4 -0.9 porin OmpA compare
BWI76_RS10935 -2.3 -4.6 glucan biosynthesis glucosyltransferase H compare
BWI76_RS25065 -2.3 -3.0 polyribonucleotide nucleotidyltransferase compare
BWI76_RS05015 -2.3 -2.1 transcriptional regulator compare
BWI76_RS04305 -2.2 -1.2 molecular chaperone DnaJ compare
BWI76_RS22755 -2.2 -4.1 phosphoadenosine phosphosulfate reductase compare
BWI76_RS01115 -2.2 -2.0 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS05915 -2.2 -2.9 helix-turn-helix transcriptional regulator compare
BWI76_RS25070 -2.2 -1.5 hypothetical protein compare
BWI76_RS01125 -2.2 -3.6 4-alpha-L-fucosyltransferase compare
BWI76_RS25060 -2.1 -5.3 lipoprotein NlpI compare
BWI76_RS00875 -2.1 -3.4 DNA-binding transcriptional regulator FabR compare
BWI76_RS10060 -2.1 -1.8 acylphosphatase compare
BWI76_RS00140 -2.1 -1.4 phosphate transport system regulator PhoU compare
BWI76_RS09730 -2.1 -0.9 pyruvate formate lyase 1-activating protein compare
BWI76_RS11980 -2.1 -1.7 DeoR family transcriptional regulator compare
BWI76_RS19840 -2.1 -0.6 hypothetical protein compare
BWI76_RS17190 -2.1 -1.8 TonB system transport protein TonB compare
BWI76_RS14065 -2.0 -1.9 hypothetical protein compare
BWI76_RS02530 -2.0 -1.4 tRNA dimethylallyltransferase compare
BWI76_RS09755 -2.0 -3.2 phosphoserine transaminase compare
BWI76_RS19920 -2.0 -8.5 hybrid sensor histidine kinase/response regulator compare
BWI76_RS12070 -2.0 -1.1 hypothetical protein compare
BWI76_RS08750 -2.0 -1.6 kinase inhibitor compare
BWI76_RS14320 -2.0 -1.8 hypothetical protein compare
BWI76_RS25335 -2.0 -1.7 stringent starvation protein A compare
BWI76_RS24605 -2.0 -5.4 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS26470 -2.0 -3.8 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS02745 -1.9 -1.2 hypothetical protein compare
BWI76_RS02725 -1.9 -1.0 HxlR family transcriptional regulator compare
BWI76_RS23830 -1.9 -4.5 hypothetical protein compare
BWI76_RS04160 -1.9 -3.1 phosphoserine phosphatase compare
BWI76_RS00180 -1.9 -0.8 F0F1 ATP synthase subunit epsilon compare
BWI76_RS03660 -1.9 -2.7 hypothetical protein compare
BWI76_RS05350 -1.9 -7.7 Rcs stress response system protein RcsF compare
BWI76_RS05835 -1.8 -1.7 gamma-glutamyl-phosphate reductase compare
BWI76_RS17860 -1.8 -1.8 YoaH family protein compare
BWI76_RS25870 -1.8 -1.3 elongation factor Tu compare
BWI76_RS25700 -1.7 -3.6 heavy metal-responsive transcriptional regulator compare
BWI76_RS01385 -1.7 -2.2 potassium transporter compare
BWI76_RS26775 -1.7 -5.0 endo-1,4-D-glucanase compare
BWI76_RS27875 -1.7 -1.6 membrane protein compare
BWI76_RS24900 -1.7 -1.0 DeoR family transcriptional regulator compare
BWI76_RS21290 -1.7 -3.5 DNA-binding transcriptional regulator compare
BWI76_RS16490 -1.7 -1.4 glutaredoxin compare
BWI76_RS20150 -1.7 -2.1 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS26440 -1.7 -1.1 hypothetical protein compare
BWI76_RS04645 -1.7 -3.0 3-dehydroquinase compare
BWI76_RS26200 -1.7 -5.8 starch synthase compare
BWI76_RS09670 -1.7 -2.8 recombination factor protein RarA compare
BWI76_RS27440 -1.7 -1.1 DNA helicase RecG compare
BWI76_RS14325 -1.6 -3.2 maturase compare
BWI76_RS14375 -1.6 -3.0 hypothetical protein compare
BWI76_RS09305 -1.6 -3.4 hypothetical protein compare
BWI76_RS19055 -1.6 -8.9 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS26095 -1.6 -0.7 shikimate kinase compare
BWI76_RS14005 -1.6 -1.4 TetR family transcriptional regulator compare
BWI76_RS24580 -1.6 -3.3 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS13595 -1.6 -3.3 transcriptional regulator compare
BWI76_RS16315 -1.6 -1.3 SirA-like protein compare
BWI76_RS16200 -1.6 -1.2 NAD(P) transhydrogenase subunit beta compare
BWI76_RS20785 -1.6 -1.2 ethanolamine utilization protein EutJ compare
BWI76_RS15110 -1.6 -4.5 putative excinuclease ABC subunit A compare
BWI76_RS26390 -1.6 -5.9 cell division protein FtsX compare
BWI76_RS04470 -1.6 -7.1 carbamoyl phosphate synthase large subunit compare
BWI76_RS25910 -1.6 -5.4 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS08385 -1.6 -2.6 citrate (Si)-synthase compare
BWI76_RS09940 -1.6 -3.2 paraquat-inducible protein B compare
BWI76_RS16425 -1.6 -2.9 hypothetical protein compare
BWI76_RS27820 -1.5 -0.9 ilvB operon leader peptide IvbL compare
BWI76_RS10930 -1.5 -6.3 glucan biosynthesis protein G compare
BWI76_RS17720 -1.5 -0.4 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS19035 -1.5 -5.4 dTDP-rhamnosyl transferase compare
BWI76_RS09190 -1.5 -1.4 hypothetical protein compare
BWI76_RS24600 -1.5 -1.7 dihydroxyacetone kinase compare
BWI76_RS00720 -1.5 -1.8 DNA-binding response regulator compare
BWI76_RS00355 -1.5 -1.0 DNA polymerase I compare
BWI76_RS04525 -1.5 -1.2 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS10745 -1.5 -0.7 hypothetical protein compare
BWI76_RS13560 -1.5 -0.7 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS19910 -1.5 -7.6 phosphotransferase RcsD compare
BWI76_RS16275 -1.5 -2.7 fumarate hydratase FumA compare
BWI76_RS22430 -1.5 -2.1 manganese/iron transporter ATP-binding protein compare
BWI76_RS05450 -1.5 -0.6 ribonuclease HI compare
BWI76_RS12215 -1.5 -2.8 HNH endonuclease compare
BWI76_RS24740 -1.5 -1.9 GntR family transcriptional regulator compare
BWI76_RS10990 -1.4 -2.5 dihydroorotase compare
BWI76_RS01220 -1.4 -4.4 DNA-dependent helicase II compare
BWI76_RS11440 -1.4 -1.1 hypothetical protein compare
BWI76_RS23825 -1.4 -6.1 hypothetical protein compare
BWI76_RS24100 -1.4 -1.7 YggS family pyridoxal phosphate enzyme compare
BWI76_RS12090 -1.4 -2.2 HNH endonuclease compare
BWI76_RS01185 -1.4 -0.9 adenylate cyclase compare
BWI76_RS16950 -1.4 -1.6 TetR family transcriptional regulator compare
BWI76_RS22645 -1.4 -5.2 RNA polymerase sigma factor RpoS compare
BWI76_RS04100 -1.4 -2.6 peptide chain release factor 3 compare
BWI76_RS00755 -1.4 -1.5 ATP-dependent protease subunit HslV compare
BWI76_RS26395 -1.4 -4.1 cell division protein FtsE compare
BWI76_RS12470 -1.4 -1.6 thiosulfate sulfurtransferase PspE compare
BWI76_RS11635 -1.4 -1.5 ABC transporter compare
BWI76_RS17530 -1.3 -2.7 hypothetical protein compare
BWI76_RS26045 -1.3 -2.7 nitrite reductase small subunit compare
BWI76_RS24765 -1.3 -2.8 membrane protein compare
BWI76_RS10305 -1.3 -4.0 transposase compare
BWI76_RS12265 -1.3 -4.2 hypothetical protein compare
BWI76_RS21165 -1.3 -1.1 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS06295 -1.3 -3.1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
BWI76_RS23885 -1.3 -0.8 2-octaprenylphenol hydroxylase compare
BWI76_RS22765 -1.3 -5.5 sulfite reductase subunit alpha compare
BWI76_RS15650 -1.3 -3.9 gp5 compare
BWI76_RS27915 -1.3 -1.7 YceK/YidQ family lipoprotein compare
BWI76_RS20900 -1.3 -0.9 outer membrane protein assembly factor BamC compare
BWI76_RS13915 -1.3 -4.2 magnesium transport protein MgtC compare
BWI76_RS12400 -1.3 -5.6 TetR family transcriptional regulator compare
BWI76_RS09825 -1.3 -3.6 envelope biogenesis factor ElyC compare
BWI76_RS11110 -1.3 -1.9 cell division protein YceG compare
BWI76_RS13920 -1.3 -4.9 magnesium-translocating P-type ATPase compare
BWI76_RS22950 -1.3 -1.7 membrane protein compare
BWI76_RS01200 -1.3 -0.8 diaminopimelate epimerase compare
BWI76_RS19615 -1.2 -3.1 vancomycin high temperature exclusion protein compare
BWI76_RS22690 -1.2 -1.8 adenylyl-sulfate kinase compare
BWI76_RS26765 -1.2 -6.1 phosphodiesterase compare
BWI76_RS23970 -1.2 -1.4 mechanosensitive ion channel protein MscS compare
BWI76_RS26075 -1.2 -0.8 DNA adenine methylase compare
BWI76_RS07185 -1.2 -1.0 hypothetical protein compare
BWI76_RS27225 -1.2 -2.6 rhodanese-like domain-containing protein compare
BWI76_RS18770 -1.2 -0.8 DNA gyrase inhibitor compare
BWI76_RS15830 -1.2 -2.6 hypothetical protein compare
BWI76_RS24750 -1.2 -3.7 membrane protein compare
BWI76_RS17675 -1.2 -1.3 hypothetical protein compare
BWI76_RS09615 -1.2 -1.9 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS12340 -1.2 -2.8 molecular chaperone Tir compare
BWI76_RS01105 -1.2 -3.3 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS12335 -1.2 -4.6 hypothetical protein compare
BWI76_RS22090 -1.2 -1.2 transcriptional regulator compare
BWI76_RS15670 -1.1 -3.2 hypothetical protein compare
BWI76_RS02610 -1.1 -3.9 transcriptional regulator compare
BWI76_RS19010 -1.1 -1.9 polysaccharide pyruvyl transferase yvff compare
BWI76_RS16515 -1.1 -1.5 LysR family transcriptional regulator compare
BWI76_RS12680 -1.1 -2.6 oxidoreductase compare
BWI76_RS26150 -1.1 -1.7 molecular chaperone Hsp33 compare
BWI76_RS24770 -1.1 -2.2 hypothetical protein compare
BWI76_RS08405 -1.1 -1.6 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS13970 -1.1 -1.7 ABC transporter compare
BWI76_RS16795 -1.1 -1.7 amino acid ABC transporter ATPase compare
BWI76_RS18070 -1.1 -2.7 DNA polymerase III subunit epsilon compare
BWI76_RS05335 -1.1 -2.1 copper homeostasis/adhesion lipoprotein NlpE compare
BWI76_RS14305 -1.1 -2.2 metallophosphoesterase compare
BWI76_RS06635 -1.1 -1.8 methylated-DNA--protein-cysteine methyltransferase compare


Specific Phenotypes

For 2 genes in this experiment

For mixed community Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL in Klebsiella michiganensis M5al

For mixed community Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL across organisms