Experiment set14IT069 for Klebsiella michiganensis M5al

Compare to:

LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL

200 most important genes:

  gene name fitness t score description  
BWI76_RS26455 -4.5 -2.1 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS09335 -4.2 -1.4 baseplate assembly protein W compare
BWI76_RS08520 -4.1 -2.3 colicin transporter TolQ compare
BWI76_RS21345 -4.0 -2.1 sigma-E factor regulatory protein RseB compare
BWI76_RS26460 -3.8 -3.7 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS05015 -3.6 -2.4 transcriptional regulator compare
BWI76_RS25335 -3.5 -2.0 stringent starvation protein A compare
BWI76_RS25920 -3.5 -2.0 peptidylprolyl isomerase compare
BWI76_RS09760 -3.1 -3.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS00875 -3.1 -5.1 DNA-binding transcriptional regulator FabR compare
BWI76_RS21075 -3.0 -1.7 membrane protein compare
BWI76_RS23265 -3.0 -2.4 hypothetical protein compare
BWI76_RS07465 -2.9 -1.3 TetR family transcriptional regulator compare
BWI76_RS00965 -2.9 -0.9 acetolactate synthase 2 small subunit compare
BWI76_RS01800 -2.7 -1.8 glucose-6-phosphate isomerase compare
BWI76_RS14390 -2.7 -1.2 hypothetical protein compare
BWI76_RS01095 -2.7 -2.5 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS21580 -2.6 -1.5 SsrA-binding protein compare
BWI76_RS08210 -2.6 -1.2 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS24600 -2.5 -2.8 dihydroxyacetone kinase compare
BWI76_RS21350 -2.5 -2.0 anti-RNA polymerase sigma factor SigE compare
BWI76_RS26730 -2.5 -7.2 inner membrane protein YhjD compare
BWI76_RS09195 -2.5 -1.1 N-acetyltransferase compare
BWI76_RS16965 -2.4 -2.6 murein lipoprotein compare
BWI76_RS21370 -2.4 -1.0 ATP-dependent RNA helicase SrmB compare
BWI76_RS22755 -2.3 -3.4 phosphoadenosine phosphosulfate reductase compare
BWI76_RS09970 -2.3 -0.9 porin OmpA compare
BWI76_RS05120 -2.2 -4.6 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS16485 -2.2 -1.4 ribonuclease T compare
BWI76_RS08530 -2.2 -1.6 protein TolA compare
BWI76_RS02580 -2.1 -2.3 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS13590 -2.1 -2.6 hypothetical protein compare
BWI76_RS11155 -2.1 -2.7 penicillin-binding protein activator LpoB compare
BWI76_RS00345 -2.1 -3.6 protein disulfide oxidoreductase DsbA compare
BWI76_RS27820 -2.0 -0.9 ilvB operon leader peptide IvbL compare
BWI76_RS05260 -2.0 -1.3 chaperone compare
BWI76_RS09730 -1.9 -0.9 pyruvate formate lyase 1-activating protein compare
BWI76_RS23885 -1.9 -0.9 2-octaprenylphenol hydroxylase compare
BWI76_RS02530 -1.9 -1.3 tRNA dimethylallyltransferase compare
BWI76_RS17980 -1.9 -3.0 RNA chaperone ProQ compare
BWI76_RS25060 -1.8 -4.2 lipoprotein NlpI compare
BWI76_RS16375 -1.8 -2.6 electron transport complex subunit G compare
BWI76_RS23920 -1.8 -2.3 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS00180 -1.8 -0.8 F0F1 ATP synthase subunit epsilon compare
BWI76_RS17975 -1.8 -2.9 tail-specific protease compare
BWI76_RS21070 -1.8 -1.4 outer membrane protein assembly factor BamB compare
BWI76_RS14320 -1.8 -1.6 hypothetical protein compare
BWI76_RS12515 -1.8 -2.2 protease compare
BWI76_RS09755 -1.8 -2.6 phosphoserine transaminase compare
BWI76_RS00440 -1.7 -1.4 CopG family transcriptional regulator compare
BWI76_RS15290 -1.7 -1.2 transcriptional regulator compare
BWI76_RS00600 -1.7 -3.5 LacI family transcriptional regulator compare
BWI76_RS06485 -1.7 -2.0 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS15760 -1.7 -1.7 hypothetical protein compare
BWI76_RS01115 -1.6 -1.6 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS20490 -1.6 -2.3 hypothetical protein compare
BWI76_RS24770 -1.6 -3.3 hypothetical protein compare
BWI76_RS01065 -1.6 -2.9 ATP-dependent RNA helicase RhlB compare
BWI76_RS19685 -1.6 -3.6 lysine transporter compare
BWI76_RS22690 -1.5 -1.9 adenylyl-sulfate kinase compare
BWI76_RS27440 -1.5 -1.0 DNA helicase RecG compare
BWI76_RS21565 -1.5 -0.8 outer membrane protein assembly factor BamE compare
BWI76_RS23330 -1.5 -3.5 transcriptional regulator GalR compare
BWI76_RS21795 -1.5 -2.5 EAL domain-containing protein compare
BWI76_RS16935 -1.5 -1.3 shikimate dehydrogenase compare
BWI76_RS15110 -1.5 -3.5 putative excinuclease ABC subunit A compare
BWI76_RS13420 -1.5 -1.7 ABC transporter permease compare
BWI76_RS10930 -1.4 -5.0 glucan biosynthesis protein G compare
BWI76_RS19010 -1.4 -2.0 polysaccharide pyruvyl transferase yvff compare
BWI76_RS23365 -1.4 -3.4 LysR family transcriptional regulator compare
BWI76_RS15115 -1.4 -1.9 MFS transporter compare
BWI76_RS10035 -1.4 -1.4 hypothetical protein compare
BWI76_RS16200 -1.4 -1.1 NAD(P) transhydrogenase subunit beta compare
BWI76_RS24605 -1.4 -3.6 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS05450 -1.4 -0.6 ribonuclease HI compare
BWI76_RS02775 -1.4 -2.7 outer membrane protein assembly factor compare
BWI76_RS14870 -1.4 -1.6 hypothetical protein compare
BWI76_RS17720 -1.4 -0.4 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS08605 -1.4 -1.2 phosphoglyceromutase compare
BWI76_RS05915 -1.3 -2.3 helix-turn-helix transcriptional regulator compare
BWI76_RS10060 -1.3 -1.4 acylphosphatase compare
BWI76_RS26570 -1.3 -0.9 anion permease compare
BWI76_RS21570 -1.3 -1.6 RnfH family protein compare
BWI76_RS22090 -1.3 -1.1 transcriptional regulator compare
BWI76_RS10935 -1.3 -2.5 glucan biosynthesis glucosyltransferase H compare
BWI76_RS21660 -1.3 -1.2 antirestriction protein compare
BWI76_RS01185 -1.3 -0.9 adenylate cyclase compare
BWI76_RS09305 -1.3 -2.1 hypothetical protein compare
BWI76_RS06780 -1.3 -3.7 MexE family multidrug efflux RND transporter periplasmic adaptor subunit compare
BWI76_RS03225 -1.3 -4.5 transcriptional regulator compare
BWI76_RS25600 -1.3 -0.7 tRNA-Thr compare
BWI76_RS09825 -1.3 -3.0 envelope biogenesis factor ElyC compare
BWI76_RS17310 -1.3 -2.1 AsnC family transcriptional regulator compare
BWI76_RS25975 -1.3 -4.7 phosphoribulokinase compare
BWI76_RS13595 -1.2 -3.0 transcriptional regulator compare
BWI76_RS21810 -1.2 -1.1 universal stress protein compare
BWI76_RS00240 -1.2 -0.9 FMN-binding protein MioC compare
BWI76_RS01385 -1.2 -1.7 potassium transporter compare
BWI76_RS20380 -1.2 -0.5 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS18550 -1.2 -1.3 tRNA-Asn compare
BWI76_RS13480 -1.2 -0.8 XRE family transcriptional regulator compare
BWI76_RS09190 -1.2 -1.4 hypothetical protein compare
BWI76_RS11895 -1.2 -2.0 AraC family transcriptional regulator compare
BWI76_RS14300 -1.2 -2.1 hypothetical protein compare
BWI76_RS00400 -1.2 -0.6 glutamine synthetase compare
BWI76_RS25300 -1.2 -1.5 hybrid sensor histidine kinase/response regulator compare
BWI76_RS27875 -1.2 -1.2 membrane protein compare
BWI76_RS17530 -1.2 -2.2 hypothetical protein compare
BWI76_RS10625 -1.2 -4.4 hypothetical protein compare
BWI76_RS13560 -1.2 -0.6 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS15605 -1.2 -1.8 hypothetical protein compare
BWI76_RS01170 -1.2 -1.8 uroporphyrinogen-III C-methyltransferase compare
BWI76_RS06535 -1.2 -2.0 endopeptidase La compare
BWI76_RS10510 -1.2 -1.4 OHCU decarboxylase compare
BWI76_RS27780 -1.2 -1.4 hypothetical protein compare
BWI76_RS24580 -1.2 -2.5 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS18815 -1.2 -1.6 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS15825 -1.1 -0.6 hypothetical protein compare
BWI76_RS26890 -1.1 -1.1 hypothetical protein compare
BWI76_RS01940 -1.1 -1.9 hypothetical protein compare
BWI76_RS01200 -1.1 -0.7 diaminopimelate epimerase compare
BWI76_RS27915 -1.1 -1.2 YceK/YidQ family lipoprotein compare
BWI76_RS15530 -1.1 -1.5 hypothetical protein compare
BWI76_RS12270 -1.1 -2.2 hypothetical protein compare
BWI76_RS02635 -1.1 -2.8 3-keto-L-gulonate-6-phosphate decarboxylase compare
BWI76_RS19705 -1.1 -1.7 kinase compare
BWI76_RS06295 -1.1 -3.0 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
BWI76_RS12320 -1.1 -4.6 hypothetical protein compare
BWI76_RS06030 -1.1 -2.6 homocysteine S-methyltransferase compare
BWI76_RS00715 -1.1 -1.0 two-component sensor histidine kinase compare
BWI76_RS05810 -1.1 -0.9 hypothetical protein compare
BWI76_RS15695 -1.1 -2.1 hypothetical protein compare
BWI76_RS13755 -1.1 -1.2 hypothetical protein compare
BWI76_RS02340 -1.1 -3.5 membrane protein FxsA compare
BWI76_RS01220 -1.1 -3.5 DNA-dependent helicase II compare
BWI76_RS25070 -1.1 -1.0 hypothetical protein compare
BWI76_RS26665 -1.1 -1.4 DNA-binding response regulator compare
BWI76_RS12205 -1.1 -2.3 hypothetical protein compare
BWI76_RS19470 -1.1 -1.4 DNA-binding response regulator compare
BWI76_RS03965 -1.1 -2.3 PTS sugar transporter compare
BWI76_RS24400 -1.0 -2.2 outer membrane channel protein TolC compare
BWI76_RS02550 -1.0 -1.9 protease modulator HflC compare
BWI76_RS05840 -1.0 -1.7 glutamate 5-kinase compare
BWI76_RS12040 -1.0 -1.1 hypothetical protein compare
BWI76_RS15920 -1.0 -1.0 hypothetical protein compare
BWI76_RS22765 -1.0 -4.1 sulfite reductase subunit alpha compare
BWI76_RS24485 -1.0 -1.1 bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase compare
BWI76_RS12495 -1.0 -0.8 2-Cys peroxiredoxin compare
BWI76_RS02780 -1.0 -5.5 translocation and assembly module TamB compare
BWI76_RS09615 -1.0 -1.4 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS21000 -1.0 -2.8 exopolyphosphatase compare
BWI76_RS21115 -1.0 -1.5 3-mercaptopyruvate sulfurtransferase compare
BWI76_RS23490 -1.0 -2.9 fimbrial protein compare
BWI76_RS05555 -1.0 -1.2 Crl family RNA polymerase assembly factor compare
BWI76_RS24280 -1.0 -2.5 biopolymer transporter ExbB compare
BWI76_RS08275 -1.0 -1.2 LexA regulated protein compare
BWI76_RS12335 -1.0 -3.9 hypothetical protein compare
BWI76_RS25870 -1.0 -0.9 elongation factor Tu compare
BWI76_RS08245 -1.0 -1.4 MFS transporter compare
BWI76_RS24910 -1.0 -3.2 rRNA (cytidine-2'-O-)-methyltransferase compare
BWI76_RS20280 -1.0 -1.9 phosphodiesterase compare
BWI76_RS12535 -1.0 -3.1 hypothetical protein compare
BWI76_RS20385 -1.0 -1.8 aspartate-semialdehyde dehydrogenase compare
BWI76_RS12255 -1.0 -6.3 hypothetical protein compare
BWI76_RS10955 -1.0 -1.1 hypothetical protein compare
BWI76_RS15990 -1.0 -2.4 serine protease compare
BWI76_RS06775 -1.0 -5.7 multidrug efflux RND transporter permease subunit compare
BWI76_RS05040 -1.0 -2.1 type II secretion system protein N compare
BWI76_RS15675 -0.9 -5.0 hypothetical protein compare
BWI76_RS24850 -0.9 -3.0 DeoR family transcriptional regulator compare
BWI76_RS16555 -0.9 -2.2 hypothetical protein compare
BWI76_RS08525 -0.9 -0.9 colicin transporter compare
BWI76_RS12380 -0.9 -3.1 DNA polymerase V subunit UmuD compare
BWI76_RS04705 -0.9 -1.9 DNA-binding transcriptional regulator FruR compare
BWI76_RS00425 -0.9 -2.0 D-tyrosyl-tRNA(Tyr) deacylase compare
BWI76_RS15650 -0.9 -3.0 gp5 compare
BWI76_RS18445 -0.9 -3.6 glycosyltransferase compare
BWI76_RS19055 -0.9 -4.7 dTDP-4-dehydrorhamnose 3,5-epimerase compare
BWI76_RS19035 -0.9 -3.0 dTDP-rhamnosyl transferase compare
BWI76_RS00080 -0.9 -1.6 N-acetylmannosamine kinase compare
BWI76_RS03345 -0.9 -4.4 prophage P4 integrase compare
BWI76_RS18070 -0.9 -1.7 DNA polymerase III subunit epsilon compare
BWI76_RS17300 -0.9 -0.8 tRNA-Tyr compare
BWI76_RS18470 -0.9 -1.4 hypothetical protein compare
BWI76_RS11395 -0.9 -2.6 RNA polymerase sigma factor FecI compare
BWI76_RS07845 -0.9 -1.1 LacI family transcriptional regulator compare
BWI76_RS22840 -0.9 -1.1 transposase compare
BWI76_RS19900 -0.9 -1.3 FAD:protein FMN transferase compare
BWI76_RS11980 -0.9 -0.9 DeoR family transcriptional regulator compare
BWI76_RS04815 -0.9 -0.9 cell division protein ZapD compare
BWI76_RS05005 -0.9 -1.4 polynucleotide adenylyltransferase compare
BWI76_RS12405 -0.9 -2.7 diguanylate phosphodiesterase compare
BWI76_RS07460 -0.9 -1.6 hypothetical protein compare
BWI76_RS18230 -0.9 -2.0 trehalose-6-phosphate synthase compare
BWI76_RS14375 -0.9 -1.7 hypothetical protein compare
BWI76_RS12325 -0.9 -5.6 hypothetical protein compare
BWI76_RS14330 -0.9 -3.0 IS3 family transposase compare
BWI76_RS08425 -0.9 -1.7 succinyl-CoA ligase subunit beta compare
BWI76_RS27425 -0.9 -0.8 DNA-directed RNA polymerase subunit omega compare
BWI76_RS14385 -0.9 -3.3 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment

For mixed community Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL in Klebsiella michiganensis M5al

For mixed community Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL across organisms